BLASTX nr result

ID: Dioscorea21_contig00004746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004746
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315622.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
emb|CBI21762.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002266661.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...    62   4e-08
emb|CAN73193.1| hypothetical protein VITISV_022287 [Vitis vinifera]    62   4e-08
ref|XP_004136606.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...    61   8e-08

>ref|XP_002315622.1| predicted protein [Populus trichocarpa] gi|222864662|gb|EEF01793.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/72 (48%), Positives = 39/72 (54%)
 Frame = +3

Query: 12  RSLLCSQRTHLVYGNQRSDSACKLFXXXXXXXXXXXXXXXXXXXXEKTHFGGLKDEDRIF 191
           R +   QRT LV  ++R     + F                    EKTHFGGLKDEDRIF
Sbjct: 5   RGIFSLQRTALVRQSERLGVGFRSFSTQAPTNAGAPQPPPPPPPPEKTHFGGLKDEDRIF 64

Query: 192 TNVYGLHDPFLK 227
           TNVYGLHDPFLK
Sbjct: 65  TNVYGLHDPFLK 76


>emb|CBI21762.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/73 (46%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +3

Query: 12  RSLLCSQRTHLVYGNQRS-DSACKLFXXXXXXXXXXXXXXXXXXXXEKTHFGGLKDEDRI 188
           R +L  QR  LV    +     C+ F                    EKTHFGGLKDEDRI
Sbjct: 124 RGILTLQRMALVSRQSKKWGPGCRAFSTQAATTASASQPPPPPPPPEKTHFGGLKDEDRI 183

Query: 189 FTNVYGLHDPFLK 227
           FTN+YGLHDPFLK
Sbjct: 184 FTNLYGLHDPFLK 196


>ref|XP_002266661.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like [Vitis vinifera]
          Length = 487

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/73 (46%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +3

Query: 12  RSLLCSQRTHLVYGNQRS-DSACKLFXXXXXXXXXXXXXXXXXXXXEKTHFGGLKDEDRI 188
           R +L  QR  LV    +     C+ F                    EKTHFGGLKDEDRI
Sbjct: 5   RGILTLQRMALVSRQSKKWGPGCRAFSTQAATTASASQPPPPPPPPEKTHFGGLKDEDRI 64

Query: 189 FTNVYGLHDPFLK 227
           FTN+YGLHDPFLK
Sbjct: 65  FTNLYGLHDPFLK 77


>emb|CAN73193.1| hypothetical protein VITISV_022287 [Vitis vinifera]
          Length = 489

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/73 (46%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +3

Query: 12  RSLLCSQRTHLVYGNQRS-DSACKLFXXXXXXXXXXXXXXXXXXXXEKTHFGGLKDEDRI 188
           R +L  QR  LV    +     C+ F                    EKTHFGGLKDEDRI
Sbjct: 7   RGILTLQRMALVSRQSKKWGPGCRAFSTQAATTASASQPPPPPPPPEKTHFGGLKDEDRI 66

Query: 189 FTNVYGLHDPFLK 227
           FTN+YGLHDPFLK
Sbjct: 67  FTNLYGLHDPFLK 79


>ref|XP_004136606.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like [Cucumis sativus]
           gi|449511484|ref|XP_004163967.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like [Cucumis sativus]
          Length = 480

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +3

Query: 147 EKTHFGGLKDEDRIFTNVYGLHDPFLK 227
           EKTHFGGLKDEDRIFTN+YGLHDPFLK
Sbjct: 45  EKTHFGGLKDEDRIFTNLYGLHDPFLK 71


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