BLASTX nr result

ID: Dioscorea21_contig00004736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004736
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324826.1| predicted protein [Populus trichocarpa] gi|2...    98   3e-18
ref|XP_002284708.1| PREDICTED: uncharacterized protein LOC100264...    98   3e-18
emb|CBI20957.3| unnamed protein product [Vitis vinifera]               97   6e-18
emb|CAN80541.1| hypothetical protein VITISV_030843 [Vitis vinifera]    96   1e-17
ref|NP_001140257.1| uncharacterized protein LOC100272299 [Zea ma...    96   2e-17

>ref|XP_002324826.1| predicted protein [Populus trichocarpa] gi|222866260|gb|EEF03391.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 88/261 (33%), Positives = 132/261 (50%), Gaps = 14/261 (5%)
 Frame = -3

Query: 926 AFITGLSRSIPPSTEQAPQSPSASLLEDVT-------GLSLHQHHESKGPTASSAENASG 768
           A ITG  ++IP S +   +     + +++T       G+S      S+  T +S  + S 
Sbjct: 22  ALITGQIQAIP-SQKLISEDSLPHISDEITVSPDGKDGVSDSTLVNSEPTTIASGSDGST 80

Query: 767 IEPVITSKTIHETPRHESGHESMTRAVSNEATMTNFEADGPCVKASTASTLQTSIEPAIQ 588
           +E  +               E+ ++  S+ AT T        V+ ST S+  T  E  I+
Sbjct: 81  VETSLRGFETGVGASLAPSVETSSKVESSLATST--------VQKSTRSSSGT--EQKIK 130

Query: 587 SQTAPHINPHKTQSIFTARKISHSISLSENLRLICAVAIGLLVILQYHAYSS-GGNFVRS 411
            +  PHI+     S  T+ +IS +I+ SE  RL+C+V +GLLV+L Y  +   G NFVRS
Sbjct: 131 PR--PHIS-----SFVTSNQISSAIAASEKSRLLCSVVVGLLVVLSYLGFPLLGSNFVRS 183

Query: 410 IITFRPLLLVLLTDATIVLGRMLLAKE---SNGGDNERTKVEADSTNSISQA---LEVAL 249
           II FRPL L+LLT+ T+VL  +L   +       D E      D ++ I QA   +EV L
Sbjct: 184 IIGFRPLYLLLLTNLTLVLVPLLFNNQRGFERAVDAENKIPSTDGSDWIEQAGNVMEVGL 243

Query: 248 VLQKGLTAVTMDCSICAVIII 186
           V+Q+ + A  MDCS+ AVIII
Sbjct: 244 VIQRAMDAAFMDCSVYAVIII 264


>ref|XP_002284708.1| PREDICTED: uncharacterized protein LOC100264664 [Vitis vinifera]
          Length = 307

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 11/159 (6%)
 Frame = -3

Query: 626 ASTLQTSIEPAIQS--QTAPHINPHKTQSIFTARKISHSISLSENLRLICAVAIGLLVIL 453
           +ST+QTS      +  Q+ PH + H+    FT  +IS +++ SE+ R++C+VA  LLV+L
Sbjct: 144 SSTIQTSFVSTADTHQQSEPHTHQHR---FFTPAQISSAVAASESTRILCSVAAALLVVL 200

Query: 452 QYHAYSS-GGNFVRSIITFRPLLLVLLTDATIVLGRMLLAKESNGGDNERTKVEADS--- 285
               +   G N ++SI   RPL L+LL + T+VL R+L  K+  GG N   KV   +   
Sbjct: 201 SNLGFPGLGSNIIKSITATRPLYLLLLANLTVVLARLLSDKQ--GGSNRAGKVVNKAPLE 258

Query: 284 -----TNSISQALEVALVLQKGLTAVTMDCSICAVIIIC 183
                 + +S+ALE +L+LQK + +V MDCS  A+++IC
Sbjct: 259 SGNGWADQVSRALEASLLLQKVVDSVFMDCSFYAIVVIC 297


>emb|CBI20957.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 11/159 (6%)
 Frame = -3

Query: 626 ASTLQTSIEPAIQS--QTAPHINPHKTQSIFTARKISHSISLSENLRLICAVAIGLLVIL 453
           +ST+QTS      +  Q+ PH + H+    FT  +IS +++ SE+ R++C+VA  LLV+L
Sbjct: 144 SSTIQTSFVSTADTHQQSEPHTHQHR---FFTPAQISSAVAASESTRILCSVAAALLVVL 200

Query: 452 QYHAYSS-GGNFVRSIITFRPLLLVLLTDATIVLGRMLLAKESNGGDNERTKVEADS--- 285
               +   G N ++SI   RPL L+LL + T+VL R+L  K+  GG N   KV   +   
Sbjct: 201 SNLGFPGLGSNIIKSITATRPLYLLLLANLTVVLARLLSDKQ--GGSNRAGKVVNKAPLE 258

Query: 284 -----TNSISQALEVALVLQKGLTAVTMDCSICAVIIIC 183
                 + +S+ALE +L+LQK + +V MDCS  A++++C
Sbjct: 259 SGNGWADQVSRALEASLLLQKVVDSVFMDCSFYAIVLLC 297


>emb|CAN80541.1| hypothetical protein VITISV_030843 [Vitis vinifera]
          Length = 238

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 11/159 (6%)
 Frame = -3

Query: 626 ASTLQTSIEPAIQS--QTAPHINPHKTQSIFTARKISHSISLSENLRLICAVAIGLLVIL 453
           +ST+QTS      +  Q+ PH + H+    FT  +IS +++ SE+ R++C+VA  LLV+L
Sbjct: 75  SSTIQTSSVSTADTHQQSEPHTHQHR---FFTPAQISSAVAASESTRILCSVAAALLVVL 131

Query: 452 QYHAYSS-GGNFVRSIITFRPLLLVLLTDATIVLGRMLLAKESNGGDNERTKVEADS--- 285
               +   G N ++SI   RPL L+LL + T+VL R+L  K+  GG N   KV   +   
Sbjct: 132 SNLGFPGLGSNIIKSITATRPLYLLLLANLTVVLARLLSDKQ--GGSNRAGKVVNKAPLE 189

Query: 284 -----TNSISQALEVALVLQKGLTAVTMDCSICAVIIIC 183
                 + +S+ALE +L+LQK + +V MDCS  AV++ C
Sbjct: 190 SGNGWADQVSRALEASLLLQKVVDSVFMDCSFYAVVVXC 228


>ref|NP_001140257.1| uncharacterized protein LOC100272299 [Zea mays]
           gi|194698720|gb|ACF83444.1| unknown [Zea mays]
           gi|195622156|gb|ACG32908.1| hypothetical protein [Zea
           mays] gi|413951823|gb|AFW84472.1| hypothetical protein
           ZEAMMB73_590193 [Zea mays]
          Length = 332

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 16/206 (7%)
 Frame = -3

Query: 740 IHETPRHESGHESMTRAVSNEATMTNFEADGPCVKASTASTLQTSIEPAIQSQTAPHINP 561
           +++TP H    E+++  + +     N   DG  V  +T+     S++P+ +++  P   P
Sbjct: 130 VNQTPLHTHDQETVSNNIIHAGVSKNTSHDG--VSKNTSHDEVASVQPSREAEMRPRSAP 187

Query: 560 --HKTQSI--------------FTARKISHSISLSENLRLICAVAIGLLVILQYHAYSSG 429
               TQ+               FT ++I+ +IS +E+ R + +V I  LV+L       G
Sbjct: 188 PSQSTQADNSGWSVETLMELLDFTPQEITKAISATESNRFVASVVIAFLVVLSNWGLDIG 247

Query: 428 GNFVRSIITFRPLLLVLLTDATIVLGRMLLAKESNGGDNERTKVEADSTNSISQALEVAL 249
           G   R ++  RPLL +++T+ TIV   ++  K+ N        V   S +S+ Q LE+ L
Sbjct: 248 GAITRVLVGTRPLLFLIVTNITIVFTLLMENKDPNVRSRP-VGVNLGSADSLGQMLEIGL 306

Query: 248 VLQKGLTAVTMDCSICAVIIICAFVF 171
           +LQK L A+ +DCS+CAVI+IC   F
Sbjct: 307 LLQKALGALLIDCSVCAVIMICFLGF 332


Top