BLASTX nr result

ID: Dioscorea21_contig00004718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004718
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK4693...    61   8e-08
ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycin...    60   2e-07
ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycin...    60   2e-07
gb|AFK39838.1| unknown [Lotus japonicus]                               59   3e-07
ref|XP_003628554.1| 30S ribosomal protein S20 [Medicago truncatu...    59   3e-07

>gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK46938.1| unknown
           [Lotus japonicus]
          Length = 177

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/32 (84%), Positives = 27/32 (84%)
 Frame = +3

Query: 3   GALHRNTGAHRKSRLARSKKDVLIHHGWYTPV 98
           G LHRNTG HRKSRLAR KK V IHHGWYTPV
Sbjct: 141 GTLHRNTGGHRKSRLARRKKVVEIHHGWYTPV 172


>ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycine max]
           gi|255640470|gb|ACU20521.1| unknown [Glycine max]
          Length = 164

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   GALHRNTGAHRKSRLARSKKDVLIHHGWYTPVVSA 107
           G LHRNTGA+RKSRLAR KK V IHHGWYTP   A
Sbjct: 128 GTLHRNTGANRKSRLARRKKAVEIHHGWYTPTPEA 162


>ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycine max]
           gi|255625577|gb|ACU13133.1| unknown [Glycine max]
          Length = 180

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   GALHRNTGAHRKSRLARSKKDVLIHHGWYTPVVSA 107
           G LHRNTGA+RKSRLAR KK V IHHGWYTP   A
Sbjct: 144 GTLHRNTGANRKSRLARRKKAVEIHHGWYTPAPEA 178


>gb|AFK39838.1| unknown [Lotus japonicus]
          Length = 79

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/32 (81%), Positives = 26/32 (81%)
 Frame = +3

Query: 3   GALHRNTGAHRKSRLARSKKDVLIHHGWYTPV 98
           G LHRNTG HRK RLAR KK V IHHGWYTPV
Sbjct: 43  GTLHRNTGGHRKPRLARRKKVVEIHHGWYTPV 74


>ref|XP_003628554.1| 30S ribosomal protein S20 [Medicago truncatula]
           gi|355522576|gb|AET03030.1| 30S ribosomal protein S20
           [Medicago truncatula]
          Length = 173

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   GALHRNTGAHRKSRLARSKKDVLIHHGWYTPVVSA 107
           G LHRNTGA+RKSRLAR KK V IHHGWY PV  A
Sbjct: 137 GTLHRNTGANRKSRLARRKKAVEIHHGWYAPVPQA 171


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