BLASTX nr result

ID: Dioscorea21_contig00004713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004713
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565746.1| uncharacterized protein [Arabidopsis thaliana] ...    64   1e-08
gb|AAM62874.1| unknown [Arabidopsis thaliana]                          63   2e-08
ref|XP_002879399.1| hypothetical protein ARALYDRAFT_482183 [Arab...    60   2e-07
ref|XP_004144504.1| PREDICTED: uncharacterized protein LOC101202...    59   4e-07
dbj|BAJ98665.1| predicted protein [Hordeum vulgare subsp. vulgar...    57   2e-06

>ref|NP_565746.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197239|gb|AAC25940.2| expressed protein
           [Arabidopsis thaliana] gi|20259343|gb|AAM13996.1|
           unknown protein [Arabidopsis thaliana]
           gi|21689677|gb|AAM67460.1| unknown protein [Arabidopsis
           thaliana] gi|110743618|dbj|BAE99646.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330253607|gb|AEC08701.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 183

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 42/77 (54%)
 Frame = +3

Query: 57  ALNPSLVKVLLAVMAISIATYILGPPLYWHLAEALGXXXXXXXXXXXXXXXXXXXXXXXX 236
           A + + +KV LA++A+S+  YILGPPLYWHL EAL                         
Sbjct: 2   AKHTAALKVGLALLALSMIGYILGPPLYWHLTEALAVSATSCSACVCDCSSLPLLTIPTG 61

Query: 237 XGNVSFTDCAKRDPEVS 287
             N SFTDCAKRDPEV+
Sbjct: 62  LSNGSFTDCAKRDPEVN 78


>gb|AAM62874.1| unknown [Arabidopsis thaliana]
          Length = 183

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/71 (46%), Positives = 39/71 (54%)
 Frame = +3

Query: 75  VKVLLAVMAISIATYILGPPLYWHLAEALGXXXXXXXXXXXXXXXXXXXXXXXXXGNVSF 254
           +KV LA++A+S+  YILGPPLYWHL EAL                           N SF
Sbjct: 8   LKVGLALLALSMIGYILGPPLYWHLTEALAVSATSCSACVCDCSSLPLLTIPTGLSNGSF 67

Query: 255 TDCAKRDPEVS 287
           TDCAKRDPEV+
Sbjct: 68  TDCAKRDPEVN 78


>ref|XP_002879399.1| hypothetical protein ARALYDRAFT_482183 [Arabidopsis lyrata subsp.
           lyrata] gi|297325238|gb|EFH55658.1| hypothetical protein
           ARALYDRAFT_482183 [Arabidopsis lyrata subsp. lyrata]
          Length = 183

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/77 (41%), Positives = 40/77 (51%)
 Frame = +3

Query: 57  ALNPSLVKVLLAVMAISIATYILGPPLYWHLAEALGXXXXXXXXXXXXXXXXXXXXXXXX 236
           A + + +KV LA++A+S+  YILGPPLYWHL EAL                         
Sbjct: 2   AKHTAALKVGLALLALSMIGYILGPPLYWHLTEALAVSATSCSACVCDCSSSPLLTIPTG 61

Query: 237 XGNVSFTDCAKRDPEVS 287
             N SF DCAK DPEV+
Sbjct: 62  LSNGSFADCAKHDPEVN 78


>ref|XP_004144504.1| PREDICTED: uncharacterized protein LOC101202853 [Cucumis sativus]
           gi|449526760|ref|XP_004170381.1| PREDICTED:
           uncharacterized LOC101202853 [Cucumis sativus]
          Length = 193

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +3

Query: 51  PGALNPSLVKVLLAVMAISIATYILGPPLYWHLAEAL-----GXXXXXXXXXXXXXXXXX 215
           P + NPSL+K+ LA++AI+I  YILGPPLYWH  E L                       
Sbjct: 5   PSSCNPSLIKLGLALIAITIVGYILGPPLYWHFKEGLAVVTHSSSSSSCPPCFCDCPSHP 64

Query: 216 XXXXXXXXGNVSFTDCAKRDPEVS 287
                    N +F DC K DPEVS
Sbjct: 65  VISIPEELRNSTFADCVKHDPEVS 88


>dbj|BAJ98665.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326533762|dbj|BAK05412.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 207

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = +3

Query: 30  MAGGSASPGALNPSLVKVLLAVMAISIATYILGPPLYWHLAEALG 164
           MAGGS+     +P+ V  L+A++ + +A YI+GPPLYWH+AEALG
Sbjct: 34  MAGGSSLSWGPSPAAVMALVAMLGLGVAAYIVGPPLYWHVAEALG 78


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