BLASTX nr result
ID: Dioscorea21_contig00004706
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00004706
(1789 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 632 0.0
gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptid... 631 0.0
gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japo... 631 0.0
ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II su... 630 0.0
ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [S... 623 0.0
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 632 bits (1631), Expect(2) = 0.0
Identities = 309/313 (98%), Positives = 312/313 (99%)
Frame = +1
Query: 1 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 180
QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 727 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 786
Query: 181 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGKPNRENT 360
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG+PNRENT
Sbjct: 787 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENT 846
Query: 361 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDESQGQASRYTRRDHSTSLRHS 540
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI QD+SQGQASRYTRRDHSTSLRHS
Sbjct: 847 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDSQGQASRYTRRDHSTSLRHS 906
Query: 541 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 720
ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE
Sbjct: 907 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 966
Query: 721 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 900
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 967 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1026
Query: 901 QMRGFETMYNGHT 939
QMRGFETMYNGHT
Sbjct: 1027 QMRGFETMYNGHT 1039
Score = 234 bits (598), Expect(2) = 0.0
Identities = 112/113 (99%), Positives = 113/113 (100%)
Frame = +2
Query: 1034 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC 1213
HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC
Sbjct: 1066 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC 1125
Query: 1214 EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1372
E+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1126 ERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1178
>gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|125545063|gb|EAY91202.1| hypothetical protein
OsI_12811 [Oryza sativa Indica Group]
Length = 1222
Score = 631 bits (1628), Expect(2) = 0.0
Identities = 306/313 (97%), Positives = 313/313 (100%)
Frame = +1
Query: 1 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 180
QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 758 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 817
Query: 181 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGKPNRENT 360
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FG+PNRENT
Sbjct: 818 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENT 877
Query: 361 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDESQGQASRYTRRDHSTSLRHS 540
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQD++QGQA+RYT+RDHSTSLRHS
Sbjct: 878 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHS 937
Query: 541 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 720
ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 938 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIE 997
Query: 721 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 900
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 998 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1057
Query: 901 QMRGFETMYNGHT 939
QMRGFETMYNGHT
Sbjct: 1058 QMRGFETMYNGHT 1070
Score = 232 bits (592), Expect(2) = 0.0
Identities = 112/113 (99%), Positives = 112/113 (99%)
Frame = +2
Query: 1034 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC 1213
HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVC
Sbjct: 1097 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVC 1156
Query: 1214 EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1372
EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1157 EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1209
>gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
Length = 1218
Score = 631 bits (1628), Expect(2) = 0.0
Identities = 306/313 (97%), Positives = 313/313 (100%)
Frame = +1
Query: 1 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 180
QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 754 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 813
Query: 181 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGKPNRENT 360
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FG+PNRENT
Sbjct: 814 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENT 873
Query: 361 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDESQGQASRYTRRDHSTSLRHS 540
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQD++QGQA+RYT+RDHSTSLRHS
Sbjct: 874 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHS 933
Query: 541 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 720
ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 934 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIE 993
Query: 721 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 900
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 994 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1053
Query: 901 QMRGFETMYNGHT 939
QMRGFETMYNGHT
Sbjct: 1054 QMRGFETMYNGHT 1066
Score = 232 bits (592), Expect(2) = 0.0
Identities = 112/113 (99%), Positives = 112/113 (99%)
Frame = +2
Query: 1034 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC 1213
HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVC
Sbjct: 1093 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVC 1152
Query: 1214 EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1372
EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1153 EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1205
>ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
[Brachypodium distachyon]
Length = 1228
Score = 630 bits (1624), Expect(2) = 0.0
Identities = 305/313 (97%), Positives = 313/313 (100%)
Frame = +1
Query: 1 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 180
QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 764 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 823
Query: 181 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGKPNRENT 360
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FG+PNRENT
Sbjct: 824 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENT 883
Query: 361 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDESQGQASRYTRRDHSTSLRHS 540
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQD++QGQA+RY++RDHSTSLRHS
Sbjct: 884 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHS 943
Query: 541 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 720
ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 944 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIE 1003
Query: 721 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 900
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 1004 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1063
Query: 901 QMRGFETMYNGHT 939
QMRGFETMYNGHT
Sbjct: 1064 QMRGFETMYNGHT 1076
Score = 232 bits (592), Expect(2) = 0.0
Identities = 112/113 (99%), Positives = 112/113 (99%)
Frame = +2
Query: 1034 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC 1213
HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVC
Sbjct: 1103 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVC 1162
Query: 1214 EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1372
EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1163 EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1215
>ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [Sorghum bicolor]
gi|241920604|gb|EER93748.1| hypothetical protein
SORBIDRAFT_01g013470 [Sorghum bicolor]
Length = 1218
Score = 623 bits (1607), Expect(2) = 0.0
Identities = 302/313 (96%), Positives = 311/313 (99%)
Frame = +1
Query: 1 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 180
QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 754 QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 813
Query: 181 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGKPNRENT 360
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FG+PNRENT
Sbjct: 814 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENT 873
Query: 361 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDESQGQASRYTRRDHSTSLRHS 540
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQD++QGQASRY++RDHSTSLRHS
Sbjct: 874 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTSLRHS 933
Query: 541 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 720
ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 934 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIE 993
Query: 721 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 900
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAA MG+EGDATPFTDVTVDNISKALH+C Y
Sbjct: 994 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAQMGREGDATPFTDVTVDNISKALHRCNY 1053
Query: 901 QMRGFETMYNGHT 939
QMRGFETMYNGHT
Sbjct: 1054 QMRGFETMYNGHT 1066
Score = 232 bits (592), Expect(2) = 0.0
Identities = 112/113 (99%), Positives = 112/113 (99%)
Frame = +2
Query: 1034 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVC 1213
HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVC
Sbjct: 1093 HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVC 1152
Query: 1214 EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1372
EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML
Sbjct: 1153 EKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1205