BLASTX nr result
ID: Dioscorea21_contig00004695
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00004695
(1123 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517275.1| DNA binding protein, putative [Ricinus commu... 114 1e-36
ref|XP_004136626.1| PREDICTED: uncharacterized protein LOC101216... 99 4e-32
ref|XP_002871136.1| myb family transcription factor [Arabidopsis... 94 1e-30
gb|AAM61358.1| unknown [Arabidopsis thaliana] 92 2e-30
ref|NP_196128.1| myb family transcription factor [Arabidopsis th... 92 2e-30
>ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
gi|223543538|gb|EEF45068.1| DNA binding protein, putative
[Ricinus communis]
Length = 315
Score = 114 bits (285), Expect(2) = 1e-36
Identities = 86/228 (37%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Frame = +1
Query: 442 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQXXXXXXXXXXXXD-------- 597
GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ
Sbjct: 125 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGAAGVNGSAGGGGGAA 184
Query: 598 ------DQLFASAPVPHHFLXXXXXXXXXXXXXXXXXXXXXXPVPHHFLSRGPADPFVXX 759
+ LFAS+PVP HFL P HFL P P
Sbjct: 185 ASDAATEHLFASSPVPAHFL------------------HPGRPNSDHFL---PFVPVAAL 223
Query: 760 XXXXXXXXXXXXXXXXXXXXXXXXXXXRHLGYLGSPPGSGYDRGFLARAVPPPALHRMVD 939
R +G+ GSPP +D FLAR P +HR+
Sbjct: 224 QHHHHQQQMAAAAAAAVAHPQLQSQYHRQMGHFGSPPNGQFDHPFLARQSQQP-VHRIGA 282
Query: 940 PVGVGAVRXXXXXXXXXXXSVGFYPEDFETGAGGGERRVLTLFPTKEE 1083
PV +V Y ED E+ G G R+VLTLFPT ++
Sbjct: 283 PV---------------HNTVPGYVEDLESANGNGGRKVLTLFPTGDD 315
Score = 66.2 bits (160), Expect(2) = 1e-36
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +2
Query: 272 VAGADGADEPARTLKRPRLVWTPQLHKRFVDAVAHL 379
+ A DEPARTLKRPRLVWTPQLHKRFVDAVAHL
Sbjct: 89 LGSAGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHL 124
Score = 60.5 bits (145), Expect = 8e-07
Identities = 25/37 (67%), Positives = 33/37 (89%)
Frame = +1
Query: 1 ENPRWFSRWEDQLPSPDELMPLSQSLITADLARAFDL 111
++ WFS+WE++LPSP+ELMPLSQ+LIT DLA AFD+
Sbjct: 4 DDSNWFSKWEEELPSPEELMPLSQTLITPDLAIAFDI 40
>ref|XP_004136626.1| PREDICTED: uncharacterized protein LOC101216059 [Cucumis sativus]
gi|449533272|ref|XP_004173600.1| PREDICTED:
uncharacterized LOC101216059 [Cucumis sativus]
Length = 286
Score = 98.6 bits (244), Expect(2) = 4e-32
Identities = 83/225 (36%), Positives = 96/225 (42%), Gaps = 14/225 (6%)
Frame = +1
Query: 442 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ------------XXXXXXXXX 585
GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ
Sbjct: 110 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGANGGAGLVSTAS 169
Query: 586 XXXDDQLFASAPVPHHFLXXXXXXXXXXXXXXXXXXXXXXPVPHHFLSRGPADPFVXXXX 765
D LFAS+PVP HFL +RG +D F+
Sbjct: 170 DPATDHLFASSPVPPHFLHS---------------------------ARGNSDHFL---- 198
Query: 766 XXXXXXXXXXXXXXXXXXXXXXXXXRHLGYLG-SPPGSG-YDRGFLARAVPPPALHRMVD 939
R + + G SPP +G ++ FLAR V HR+
Sbjct: 199 PFVPVGALQHHHHQMAAAAAAAQYHRQVAHFGSSPPTNGQFENTFLARPV-----HRVGA 253
Query: 940 PVGVGAVRXXXXXXXXXXXSVGFYPEDFETGAGGGERRVLTLFPT 1074
P V Y ED ++G G G R+VLTLFPT
Sbjct: 254 PAST---------------PVTNYSEDLDSGNGTGGRKVLTLFPT 283
Score = 67.0 bits (162), Expect(2) = 4e-32
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +2
Query: 278 GADGADEPARTLKRPRLVWTPQLHKRFVDAVAHL 379
G+ DEPARTLKRPRLVWTPQLHKRFVDAVAHL
Sbjct: 76 GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHL 109
Score = 63.5 bits (153), Expect = 9e-08
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +1
Query: 1 ENPRWFSRWEDQLPSPDELMPLSQSLITADLARAFDLT 114
++ WFS+WE +LPSPDELMPLSQ+LIT DLA AFD+T
Sbjct: 4 DDSNWFSKWEQELPSPDELMPLSQTLITPDLALAFDIT 41
>ref|XP_002871136.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297316973|gb|EFH47395.1| myb family transcription
factor [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 93.6 bits (231), Expect(2) = 1e-30
Identities = 50/66 (75%), Positives = 51/66 (77%)
Frame = +1
Query: 442 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQXXXXXXXXXXXXDDQLFASAP 621
GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ D LFAS+P
Sbjct: 101 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ--SGGGGGGGGDSDHLFASSP 158
Query: 622 VPHHFL 639
VP HFL
Sbjct: 159 VPPHFL 164
Score = 67.0 bits (162), Expect(2) = 1e-30
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +2
Query: 275 AGADGADEPARTLKRPRLVWTPQLHKRFVDAVAHL 379
AG DEPARTLKRPRLVWTPQLHKRFVDAVAHL
Sbjct: 66 AGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHL 100
Score = 60.8 bits (146), Expect = 6e-07
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +1
Query: 1 ENPRWFSRWEDQLPSPDELMPLSQSLITADLARAFDL 111
E+ WF++WE++LPSP+EL+PLSQSLIT DLA AFDL
Sbjct: 4 EDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDL 40
>gb|AAM61358.1| unknown [Arabidopsis thaliana]
Length = 266
Score = 92.0 bits (227), Expect(2) = 2e-30
Identities = 49/66 (74%), Positives = 51/66 (77%)
Frame = +1
Query: 442 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQXXXXXXXXXXXXDDQLFASAP 621
GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM+ D LFAS+P
Sbjct: 102 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK--SGGGGGGSGDSDHLFASSP 159
Query: 622 VPHHFL 639
VP HFL
Sbjct: 160 VPPHFL 165
Score = 68.2 bits (165), Expect(2) = 2e-30
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +2
Query: 272 VAGADGADEPARTLKRPRLVWTPQLHKRFVDAVAHL 379
+AG DEPARTLKRPRLVWTPQLHKRFVDAVAHL
Sbjct: 66 IAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHL 101
Score = 60.8 bits (146), Expect = 6e-07
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +1
Query: 1 ENPRWFSRWEDQLPSPDELMPLSQSLITADLARAFDL 111
E+ WF++WE++LPSP+EL+PLSQSLIT DLA AFDL
Sbjct: 4 EDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDL 40
>ref|NP_196128.1| myb family transcription factor [Arabidopsis thaliana]
gi|10178048|dbj|BAB11531.1| unnamed protein product
[Arabidopsis thaliana] gi|20260578|gb|AAM13187.1|
unknown protein [Arabidopsis thaliana]
gi|30023728|gb|AAP13397.1| At5g05090 [Arabidopsis
thaliana] gi|332003444|gb|AED90827.1| myb family
transcription factor [Arabidopsis thaliana]
Length = 266
Score = 92.0 bits (227), Expect(2) = 2e-30
Identities = 49/66 (74%), Positives = 51/66 (77%)
Frame = +1
Query: 442 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQXXXXXXXXXXXXDDQLFASAP 621
GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM+ D LFAS+P
Sbjct: 102 GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK--SGGGGGGSGDSDHLFASSP 159
Query: 622 VPHHFL 639
VP HFL
Sbjct: 160 VPPHFL 165
Score = 68.2 bits (165), Expect(2) = 2e-30
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +2
Query: 272 VAGADGADEPARTLKRPRLVWTPQLHKRFVDAVAHL 379
+AG DEPARTLKRPRLVWTPQLHKRFVDAVAHL
Sbjct: 66 IAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHL 101
Score = 60.8 bits (146), Expect = 6e-07
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +1
Query: 1 ENPRWFSRWEDQLPSPDELMPLSQSLITADLARAFDL 111
E+ WF++WE++LPSP+EL+PLSQSLIT DLA AFDL
Sbjct: 4 EDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDL 40