BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004677
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI57844.1| polyA binding protein, partial [Cocos nucifera]        138   5e-31
emb|CBI32381.3| unnamed protein product [Vitis vinifera]              137   1e-30
gb|ABK94932.1| unknown [Populus trichocarpa]                          137   1e-30
ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [...   137   1e-30
ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30

>gb|AFI57844.1| polyA binding protein, partial [Cocos nucifera]
          Length = 352

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/87 (75%), Positives = 78/87 (89%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           LYLKNLDDSIGD  L++LFS+FG++TSCKVMRDPNG SRG+GFV+F SP++AS+ALA+M 
Sbjct: 152 LYLKNLDDSIGDDKLRELFSEFGSITSCKVMRDPNGVSRGSGFVAFQSPDDASKALAEMN 211

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
           GK IG K LYVALAQRKEDRRA LQ+Q
Sbjct: 212 GKMIGSKPLYVALAQRKEDRRARLQAQ 238



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/87 (39%), Positives = 58/87 (66%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           +++KNL +S  +  L ++F ++G +TS  VMR+ +GKS+  GFV+F  PE A++A+ ++ 
Sbjct: 49  VFVKNLSESTTEDNLLEIFGEYGNITSAVVMREGDGKSKCFGFVNFEDPEHAAKAVKELN 108

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
           GK+  GK  YV  AQ+K +R   L+ +
Sbjct: 109 GKKFDGKEWYVGKAQKKSEREMELKGR 135


>emb|CBI32381.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/87 (77%), Positives = 76/87 (87%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           LY+KNLDDSIGD  LK+LF+ FGT+TSCKVMRDPNG SRG+GFV+FSSPEEASRALA+M 
Sbjct: 453 LYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMN 512

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
            K +  K LYVALAQRKEDRRA LQ+Q
Sbjct: 513 SKMVVSKPLYVALAQRKEDRRARLQAQ 539



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/87 (37%), Positives = 51/87 (58%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           +++KNLD  I    L D FS FG + SCKV  D +G S+G GFV F S E A +A+ ++ 
Sbjct: 259 IFIKNLDKGIDHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLN 318

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
           G  +  K ++V    RK++R + +  +
Sbjct: 319 GMLLNDKQVFVGPFVRKQERESTINKE 345



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/87 (34%), Positives = 56/87 (64%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           +++KN+ + + +  L  +F +FG +TS  VMRD +GKS+  GFV+F + ++A+ ++  + 
Sbjct: 350 VFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALN 409

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
           G++   K  YV  AQ+K +R   L+S+
Sbjct: 410 GQKFDDKEWYVGKAQKKSEREIELKSR 436


>gb|ABK94932.1| unknown [Populus trichocarpa]
          Length = 408

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/87 (75%), Positives = 76/87 (87%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           LY+KNLDDSIGD  +K+LFS FGT+TSCKVMRDPNG SRG+GFV+FS+PEEASRAL +M 
Sbjct: 74  LYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 133

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
           GK +  K LYVALAQRKEDRRA LQ+Q
Sbjct: 134 GKMVASKPLYVALAQRKEDRRARLQAQ 160


>ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|147839912|emb|CAN65906.1| hypothetical protein
           VITISV_004873 [Vitis vinifera]
          Length = 648

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/87 (77%), Positives = 76/87 (87%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           LY+KNLDDSIGD  LK+LF+ FGT+TSCKVMRDPNG SRG+GFV+FSSPEEASRALA+M 
Sbjct: 314 LYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMN 373

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
            K +  K LYVALAQRKEDRRA LQ+Q
Sbjct: 374 SKMVVSKPLYVALAQRKEDRRARLQAQ 400



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/87 (37%), Positives = 51/87 (58%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           +++KNLD  I    L D FS FG + SCKV  D +G S+G GFV F S E A +A+ ++ 
Sbjct: 120 IFIKNLDKGIDHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLN 179

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
           G  +  K ++V    RK++R + +  +
Sbjct: 180 GMLLNDKQVFVGPFVRKQERESTINKE 206



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/87 (34%), Positives = 56/87 (64%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           +++KN+ + + +  L  +F +FG +TS  VMRD +GKS+  GFV+F + ++A+ ++  + 
Sbjct: 211 VFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALN 270

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
           G++   K  YV  AQ+K +R   L+S+
Sbjct: 271 GQKFDDKEWYVGKAQKKSEREIELKSR 297



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRD-PNGKSRGTGFVSFSSPEEASRALAQM 179
           LY+ +L+ ++ DS L DLFS  G V S +V RD    +S G G+V++S+P++A+RAL  +
Sbjct: 32  LYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 91

Query: 180 QGKQIGGKFLYVALAQR 230
               + GK + +  + R
Sbjct: 92  NFTPLNGKPIRIMYSHR 108


>ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|222847485|gb|EEE85032.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/87 (77%), Positives = 76/87 (87%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           LY+KNLDDSIGD  LK+LFS FGT+TSCKVMRDPNG SRG+GFV+FS+PEEASRAL +M 
Sbjct: 309 LYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 368

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
           GK +  K LYVALAQRKEDRRA LQ+Q
Sbjct: 369 GKIVVSKPLYVALAQRKEDRRARLQAQ 395



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/80 (43%), Positives = 51/80 (63%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           +++KNLD +I    L D FS FG + SCKV  DP+G+S+G GFV F S E A +A+ ++ 
Sbjct: 115 IFIKNLDKAIDHKALHDTFSAFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLN 174

Query: 183 GKQIGGKFLYVALAQRKEDR 242
           G  +  K +YV    RK++R
Sbjct: 175 GMLLNDKQVYVGPFLRKQER 194



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/87 (39%), Positives = 57/87 (65%)
 Frame = +3

Query: 3   LYLKNLDDSIGDSTLKDLFSDFGTVTSCKVMRDPNGKSRGTGFVSFSSPEEASRALAQMQ 182
           +++KNL ++  +  L   F +FGT+TS  VMRD +GKS+  GFV+F + E+A++A+  + 
Sbjct: 206 VFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVNFENAEDAAKAVEALN 265

Query: 183 GKQIGGKFLYVALAQRKEDRRAMLQSQ 263
           GK+I  K  +V  AQ+K +R   L+ +
Sbjct: 266 GKKIDDKEWFVGKAQKKYEREVELKQR 292