BLASTX nr result

ID: Dioscorea21_contig00004657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004657
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284266.1| PREDICTED: 60S ribosomal protein L26-1 [Viti...   233   2e-59
dbj|BAK04470.1| predicted protein [Hordeum vulgare subsp. vulgare]    229   4e-58
ref|XP_002457392.1| hypothetical protein SORBIDRAFT_03g006610 [S...   228   6e-58
ref|NP_001151634.1| LOC100285268 [Zea mays] gi|195639054|gb|ACG3...   228   1e-57
ref|XP_003565134.1| PREDICTED: 60S ribosomal protein L26-1-like ...   227   2e-57

>ref|XP_002284266.1| PREDICTED: 60S ribosomal protein L26-1 [Vitis vinifera]
           gi|147769559|emb|CAN72392.1| hypothetical protein
           VITISV_032611 [Vitis vinifera]
           gi|147786955|emb|CAN73296.1| hypothetical protein
           VITISV_001956 [Vitis vinifera]
          Length = 151

 Score =  233 bits (595), Expect = 2e-59
 Identities = 120/153 (78%), Positives = 133/153 (86%)
 Frame = -2

Query: 550 MKYNPRVSSSRRKCRKAHFTAPSSVRRVLMSAPLSIDLRNKYSVRSIPIRKDDEVQVVRG 371
           MKYNPRV+SSRRKCRKAHFTAPSSVRRVLMSAPLS DLRNKY+VRS+PIRKDDEVQVVRG
Sbjct: 1   MKYNPRVTSSRRKCRKAHFTAPSSVRRVLMSAPLSTDLRNKYNVRSVPIRKDDEVQVVRG 60

Query: 370 TYKGREGKVVQVYRRRWVIHVERITREKVTGSTVNVGLDPSKVVITKLKLDKDRKALIEX 191
           T+KGREGKVVQVYRR+WVIH+ERITREKV GSTVNVG++PSKVVI KLKLDKDRK+L++ 
Sbjct: 61  TFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVINKLKLDKDRKSLLDR 120

Query: 190 XXXXXXXXXXXXKFSAEDVAAAAGGVPSLGEVD 92
                       KF+AEDVAAAA   PSL E+D
Sbjct: 121 KAKGRAADKAKGKFTAEDVAAAA--APSLQEID 151


>dbj|BAK04470.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 157

 Score =  229 bits (584), Expect = 4e-58
 Identities = 118/150 (78%), Positives = 129/150 (86%)
 Frame = -2

Query: 550 MKYNPRVSSSRRKCRKAHFTAPSSVRRVLMSAPLSIDLRNKYSVRSIPIRKDDEVQVVRG 371
           MK NPRV+SSRRKCRKAHFTAPSSVRRVLMSA LS +LR+KY+VRSIPIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 370 TYKGREGKVVQVYRRRWVIHVERITREKVTGSTVNVGLDPSKVVITKLKLDKDRKALIEX 191
           TYKGREGKVVQVYRRRWVIHVERITREKV GSTVNVG+ PSKV++TKLKLDKDRKAL++ 
Sbjct: 61  TYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVIVTKLKLDKDRKALLDR 120

Query: 190 XXXXXXXXXXXXKFSAEDVAAAAGGVPSLG 101
                       KF+AEDVAAAAGG  + G
Sbjct: 121 KARGRAADKAKGKFTAEDVAAAAGGATATG 150


>ref|XP_002457392.1| hypothetical protein SORBIDRAFT_03g006610 [Sorghum bicolor]
           gi|241929367|gb|EES02512.1| hypothetical protein
           SORBIDRAFT_03g006610 [Sorghum bicolor]
          Length = 157

 Score =  228 bits (582), Expect = 6e-58
 Identities = 117/150 (78%), Positives = 129/150 (86%)
 Frame = -2

Query: 550 MKYNPRVSSSRRKCRKAHFTAPSSVRRVLMSAPLSIDLRNKYSVRSIPIRKDDEVQVVRG 371
           MK NPRV+SSRRKCRKAHFTAPSSVRRVLMSA LS +LR+KY+VRSIPIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 370 TYKGREGKVVQVYRRRWVIHVERITREKVTGSTVNVGLDPSKVVITKLKLDKDRKALIEX 191
           TYKGREGKVVQVYRRRWVIHVERITREKV GSTVNVG+ PSKV++TKLKLDKDRKAL++ 
Sbjct: 61  TYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVIVTKLKLDKDRKALLDR 120

Query: 190 XXXXXXXXXXXXKFSAEDVAAAAGGVPSLG 101
                       KF+A+DVAAAAGG  + G
Sbjct: 121 KARGRNADKAKGKFTADDVAAAAGGAAATG 150


>ref|NP_001151634.1| LOC100285268 [Zea mays] gi|195639054|gb|ACG38995.1| 60S ribosomal
           protein L26-1 [Zea mays] gi|195648244|gb|ACG43590.1| 60S
           ribosomal protein L26-1 [Zea mays]
           gi|238014090|gb|ACR38080.1| unknown [Zea mays]
           gi|413947360|gb|AFW80009.1| 60S ribosomal protein L26-1
           [Zea mays]
          Length = 157

 Score =  228 bits (580), Expect = 1e-57
 Identities = 117/150 (78%), Positives = 129/150 (86%)
 Frame = -2

Query: 550 MKYNPRVSSSRRKCRKAHFTAPSSVRRVLMSAPLSIDLRNKYSVRSIPIRKDDEVQVVRG 371
           MK NPRV+SSRRKCRKAHFTAPSSVRRVLMSA LS +LR+KY+VRSIPIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 370 TYKGREGKVVQVYRRRWVIHVERITREKVTGSTVNVGLDPSKVVITKLKLDKDRKALIEX 191
           TYKGREGKVVQVYRRRWVIHVERITREKV GSTVNVG+ PSKV++TKLKLDKDRKAL++ 
Sbjct: 61  TYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVMVTKLKLDKDRKALLDR 120

Query: 190 XXXXXXXXXXXXKFSAEDVAAAAGGVPSLG 101
                       KF+A+DVAAAAGG  + G
Sbjct: 121 KARGRAADKAKGKFTADDVAAAAGGAAATG 150


>ref|XP_003565134.1| PREDICTED: 60S ribosomal protein L26-1-like [Brachypodium
           distachyon]
          Length = 157

 Score =  227 bits (578), Expect = 2e-57
 Identities = 117/150 (78%), Positives = 129/150 (86%)
 Frame = -2

Query: 550 MKYNPRVSSSRRKCRKAHFTAPSSVRRVLMSAPLSIDLRNKYSVRSIPIRKDDEVQVVRG 371
           MK NPRV+SSRRKCRKAHFTAPSSVRRVLMSA LS +LR+KY+VRSIPIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 370 TYKGREGKVVQVYRRRWVIHVERITREKVTGSTVNVGLDPSKVVITKLKLDKDRKALIEX 191
           T+KGREGKVVQVYRRRWVIHVERITREKV GSTVNVG+ PSKVV+TKLKLDKDRKAL++ 
Sbjct: 61  TFKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKALLDR 120

Query: 190 XXXXXXXXXXXXKFSAEDVAAAAGGVPSLG 101
                       KF+A+DVAAAAGG  + G
Sbjct: 121 KARGRAADKAKGKFTADDVAAAAGGAAATG 150


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