BLASTX nr result

ID: Dioscorea21_contig00004655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004655
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465737.1| hypothetical protein SORBIDRAFT_01g044720 [S...    94   2e-34
gb|AFW89429.1| hypothetical protein ZEAMMB73_884336 [Zea mays]         94   2e-32
ref|NP_001169310.1| uncharacterized protein LOC100383174 [Zea ma...    94   2e-32
ref|XP_003523780.1| PREDICTED: transport inhibitor response 1-li...   138   7e-31
gb|ACV87282.1| TIR1/AFB auxin receptor protein PintaAFB6 [Pinus ...    93   4e-30

>ref|XP_002465737.1| hypothetical protein SORBIDRAFT_01g044720 [Sorghum bicolor]
           gi|241919591|gb|EER92735.1| hypothetical protein
           SORBIDRAFT_01g044720 [Sorghum bicolor]
          Length = 602

 Score = 94.0 bits (232), Expect(2) = 2e-34
 Identities = 47/92 (51%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = -1

Query: 270 FVNA--SKSLVCLSGFRELGPEFLPAILPACPNLISLNLSYAEITADQLRPVILHCHNLR 97
           FV+A  +++LV LSGFR+L  E+LP I   C +L SL+LSY  +T +Q+   I  C+NL 
Sbjct: 287 FVSAGRARTLVSLSGFRDLAQEYLPTIAVVCAHLKSLDLSYTAVTPNQILMFIGQCYNLE 346

Query: 96  TFWVLDTVGDEGLKAVAKTCKELRELRVFPLD 1
           T WVLD+V DEGL++V  +CK+L+ LRV PL+
Sbjct: 347 TLWVLDSVRDEGLESVGMSCKKLQSLRVLPLN 378



 Score = 77.8 bits (190), Expect(2) = 2e-34
 Identities = 38/57 (66%), Positives = 44/57 (77%)
 Frame = -2

Query: 557 WISKFPDSPTSLESLIFDCVRLAVNFDALEALVARSPSLRRLRVNQHVSVEQLRRLM 387
           W++ FP  PT+LESL F+C    V+FDALEALVARSP L RL VN HVS+ QLRRLM
Sbjct: 198 WVAAFPPEPTNLESLSFECYEPPVDFDALEALVARSPLLNRLGVNMHVSLGQLRRLM 254


>gb|AFW89429.1| hypothetical protein ZEAMMB73_884336 [Zea mays]
          Length = 598

 Score = 94.0 bits (232), Expect(2) = 2e-32
 Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
 Frame = -1

Query: 270 FVNA--SKSLVCLSGFRELGPEFLPAILPACPNLISLNLSYAEITADQLRPVILHCHNLR 97
           FV+A  +++LV LSGFR+L  E+LP I   C +L SL+LSYA +T +Q+   I  C+NL 
Sbjct: 283 FVSAGRARTLVSLSGFRDLAQEYLPIIDVVCSHLKSLDLSYAAVTPNQILMFIGQCYNLE 342

Query: 96  TFWVLDTVGDEGLKAVAKTCKELRELRVFPLD 1
           T WVLD+V DEGL AV   CK+L+ LRV PLD
Sbjct: 343 TLWVLDSVRDEGLDAVGIYCKKLQTLRVLPLD 374



 Score = 71.2 bits (173), Expect(2) = 2e-32
 Identities = 36/57 (63%), Positives = 41/57 (71%)
 Frame = -2

Query: 557 WISKFPDSPTSLESLIFDCVRLAVNFDALEALVARSPSLRRLRVNQHVSVEQLRRLM 387
           W++ FP  PT+LESL F+C    V F  LEALVARSP L RL VN HVS+ QLRRLM
Sbjct: 194 WVAAFPPEPTNLESLSFECYEPPVAFATLEALVARSPRLSRLGVNLHVSLGQLRRLM 250


>ref|NP_001169310.1| uncharacterized protein LOC100383174 [Zea mays]
           gi|224028563|gb|ACN33357.1| unknown [Zea mays]
          Length = 594

 Score = 94.0 bits (232), Expect(2) = 2e-32
 Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
 Frame = -1

Query: 270 FVNA--SKSLVCLSGFRELGPEFLPAILPACPNLISLNLSYAEITADQLRPVILHCHNLR 97
           FV+A  +++LV LSGFR+L  E+LP I   C +L SL+LSYA +T +Q+   I  C+NL 
Sbjct: 283 FVSAGRARTLVSLSGFRDLAQEYLPIIDVVCSHLKSLDLSYAAVTPNQILMFIGQCYNLE 342

Query: 96  TFWVLDTVGDEGLKAVAKTCKELRELRVFPLD 1
           T WVLD+V DEGL AV   CK+L+ LRV PLD
Sbjct: 343 TLWVLDSVRDEGLDAVGIYCKKLQTLRVLPLD 374



 Score = 71.2 bits (173), Expect(2) = 2e-32
 Identities = 36/57 (63%), Positives = 41/57 (71%)
 Frame = -2

Query: 557 WISKFPDSPTSLESLIFDCVRLAVNFDALEALVARSPSLRRLRVNQHVSVEQLRRLM 387
           W++ FP  PT+LESL F+C    V F  LEALVARSP L RL VN HVS+ QLRRLM
Sbjct: 194 WVAAFPPEPTNLESLSFECYEPPVAFATLEALVARSPRLSRLGVNLHVSLGQLRRLM 250


>ref|XP_003523780.1| PREDICTED: transport inhibitor response 1-like protein-like
           [Glycine max]
          Length = 583

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/87 (74%), Positives = 77/87 (88%)
 Frame = -1

Query: 261 ASKSLVCLSGFRELGPEFLPAILPACPNLISLNLSYAEITADQLRPVILHCHNLRTFWVL 82
           A KSLVCLSGFRE+ P++LPAI PAC NLISLN SYA+I+ADQL  VI HCH L+TFWVL
Sbjct: 275 ACKSLVCLSGFREIWPDYLPAIYPACANLISLNFSYADISADQLISVIRHCHKLQTFWVL 334

Query: 81  DTVGDEGLKAVAKTCKELRELRVFPLD 1
           DT+ DEGL+AVA+TCK+LRELRVFP++
Sbjct: 335 DTICDEGLQAVAETCKDLRELRVFPVN 361



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
 Frame = -2

Query: 557 WISKFP--DSPTSLESLIFDCVRLAVNFDALEALVARSPSLRRLRVNQHVSVEQLRRLM 387
           WIS FP  D+ T LESL+FDCV   +N +ALE LVARSPSLR+LR+N++VS+ QL RLM
Sbjct: 186 WISCFPEIDAQTYLESLVFDCVECPINLEALERLVARSPSLRKLRLNRYVSMSQLHRLM 244


>gb|ACV87282.1| TIR1/AFB auxin receptor protein PintaAFB6 [Pinus taeda]
          Length = 575

 Score = 93.2 bits (230), Expect(2) = 4e-30
 Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
 Frame = -1

Query: 270 FVNASKSLVCLSGFRELGPEFLPAILPACPNLISLNLSYA-EITADQLRPVILHCHNLRT 94
           F N +K L  LSG  E+ P +LPA+   C NL  LNLSYA  I + +L  ++ HC  LR 
Sbjct: 265 FKNCNK-LRTLSGMWEVAPLYLPALYSVCSNLTFLNLSYAANIRSMELGRLVSHCPQLRR 323

Query: 93  FWVLDTVGDEGLKAVAKTCKELRELRVFPLD 1
            WVLDTVGD+GL+ V+  CK LRELRVFPLD
Sbjct: 324 LWVLDTVGDKGLETVSSNCKNLRELRVFPLD 354



 Score = 63.9 bits (154), Expect(2) = 4e-30
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = -2

Query: 557 WISKFPDSPTSLESLIFDCVRLAVNFDALEALVARSPSLRRLRVNQHVSVEQLRRLM 387
           W+S FP+S  SL SL F C++  VNFDAL+ LVAR  SLR L++N+ +S+EQL+RL+
Sbjct: 178 WLSCFPESCVSLVSLNFACLQSEVNFDALQRLVARCISLRSLKLNKTLSLEQLKRLL 234


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