BLASTX nr result

ID: Dioscorea21_contig00004628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004628
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]                    344   5e-93
ref|XP_004143417.1| PREDICTED: tubulin alpha chain-like [Cucumis...   344   5e-93
ref|XP_004136930.1| PREDICTED: tubulin alpha-4 chain-like [Cucum...   344   5e-93
ref|XP_002301128.1| tubulin alpha-1 chain [Populus trichocarpa] ...   344   5e-93
gb|AFR42054.1| alpha-tubulin, partial [Populus fremontii]             344   5e-93

>gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]
          Length = 451

 Score =  344 bits (882), Expect = 5e-93
 Identities = 166/166 (100%), Positives = 166/166 (100%)
 Frame = -3

Query: 500 SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 321
           SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA
Sbjct: 271 SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 330

Query: 320 AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 141
           AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR
Sbjct: 331 AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 390

Query: 140 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 3
           IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 391 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436


>ref|XP_004143417.1| PREDICTED: tubulin alpha chain-like [Cucumis sativus]
           gi|449499840|ref|XP_004160931.1| PREDICTED: tubulin
           alpha chain-like [Cucumis sativus]
          Length = 450

 Score =  344 bits (882), Expect = 5e-93
 Identities = 166/166 (100%), Positives = 166/166 (100%)
 Frame = -3

Query: 500 SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 321
           SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA
Sbjct: 271 SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 330

Query: 320 AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 141
           AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR
Sbjct: 331 AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 390

Query: 140 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 3
           IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 391 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436


>ref|XP_004136930.1| PREDICTED: tubulin alpha-4 chain-like [Cucumis sativus]
           gi|449478777|ref|XP_004155416.1| PREDICTED: tubulin
           alpha-4 chain-like [Cucumis sativus]
          Length = 450

 Score =  344 bits (882), Expect = 5e-93
 Identities = 166/166 (100%), Positives = 166/166 (100%)
 Frame = -3

Query: 500 SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 321
           SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA
Sbjct: 271 SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 330

Query: 320 AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 141
           AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR
Sbjct: 331 AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 390

Query: 140 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 3
           IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 391 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436


>ref|XP_002301128.1| tubulin alpha-1 chain [Populus trichocarpa]
           gi|29124983|gb|AAO63781.1| alpha-tubulin 1 [Populus
           tremuloides] gi|118488366|gb|ABK96001.1| unknown
           [Populus trichocarpa] gi|222842854|gb|EEE80401.1|
           tubulin alpha-1 chain [Populus trichocarpa]
          Length = 451

 Score =  344 bits (882), Expect = 5e-93
 Identities = 166/166 (100%), Positives = 166/166 (100%)
 Frame = -3

Query: 500 SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 321
           SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA
Sbjct: 271 SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 330

Query: 320 AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 141
           AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR
Sbjct: 331 AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 390

Query: 140 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 3
           IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 391 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436


>gb|AFR42054.1| alpha-tubulin, partial [Populus fremontii]
          Length = 196

 Score =  344 bits (882), Expect = 5e-93
 Identities = 166/166 (100%), Positives = 166/166 (100%)
 Frame = -3

Query: 500 SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 321
           SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA
Sbjct: 31  SYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA 90

Query: 320 AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 141
           AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR
Sbjct: 91  AVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSR 150

Query: 140 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 3
           IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 151 IDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 196


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