BLASTX nr result

ID: Dioscorea21_contig00004529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004529
         (1456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276691.1| PREDICTED: putative RNA-binding protein Luc7...   445   e-131
emb|CAN71034.1| hypothetical protein VITISV_000356 [Vitis vinifera]   442   e-131
ref|NP_001239802.1| uncharacterized protein LOC100793888 [Glycin...   428   e-126
ref|XP_003534502.1| PREDICTED: putative RNA-binding protein Luc7...   427   e-126
ref|XP_003624200.1| Luc7-like protein [Medicago truncatula] gi|3...   424   e-125

>ref|XP_002276691.1| PREDICTED: putative RNA-binding protein Luc7-like 2 [Vitis vinifera]
            gi|297735244|emb|CBI17606.3| unnamed protein product
            [Vitis vinifera]
          Length = 419

 Score =  445 bits (1144), Expect(2) = e-131
 Identities = 230/284 (80%), Positives = 249/284 (87%), Gaps = 4/284 (1%)
 Frame = -2

Query: 1395 MDALRKQLDVLMGANRNGDVAEVNRKYSDRDVCRLYLAGLCPHDLFQLTKMDLGPCSKIH 1216
            MDA+RKQLDVLMGANRNGDV EVNRKY DRDVCRL+L GLCPH+LFQLTKMD+GPC K+H
Sbjct: 1    MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLFLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 1215 SLQLRKEYEEAKAKGLCNYSRELEDMIERLILECERKIQRALKRLEDEDAKAAVAISVSE 1036
            SLQLRKEYEEAKAKG+ NY R+LED+I+RLI+EC+RKI RALKRLEDEDAKAA+AISVSE
Sbjct: 61   SLQLRKEYEEAKAKGVHNYDRDLEDVIDRLIVECDRKIARALKRLEDEDAKAAIAISVSE 120

Query: 1035 VTQTPEILELSKQIKEKLKEVDAFDLEGKTDNKIQALEVVEELRAKRADKQSVLLLDAFN 856
            VTQTPE+LELSKQIKEKLKE D FDLEGKTD+KI+ALEVVEELR KRADKQS+LLLDAFN
Sbjct: 121  VTQTPEVLELSKQIKEKLKEADQFDLEGKTDSKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 855  KDRASLPQ----PSQLAPVPVLTPPDPRTQEIINEKLKKAEDLGEKGMIDXXXXXXXXXX 688
            KDRASLPQ    P  LAP+PVL  PDPRTQE+INEKLKKAEDLGE+GMID          
Sbjct: 181  KDRASLPQPLPNPPPLAPLPVLA-PDPRTQEMINEKLKKAEDLGEQGMIDEAQKALEEAE 239

Query: 687  XXXXLGGRPEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD 556
                L  R EPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD
Sbjct: 240  ALKKLAPRQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD 283



 Score = 52.0 bits (123), Expect(2) = e-131
 Identities = 30/70 (42%), Positives = 35/70 (50%)
 Frame = -1

Query: 505 LADHFGGKLHLGYMQIREKLAEFQXXXXXXXXXXXXXXXXXXXXXXXXXXRAGSRDRERD 326
           LADHFGGKLHLGYMQIREKLAE Q                             S++R RD
Sbjct: 288 LADHFGGKLHLGYMQIREKLAELQEERNKSRKVDRHENDRR------------SKERSRD 335

Query: 325 RDDHGSREKA 296
            D   S+++A
Sbjct: 336 HDREASKDRA 345


>emb|CAN71034.1| hypothetical protein VITISV_000356 [Vitis vinifera]
          Length = 419

 Score =  442 bits (1137), Expect(2) = e-131
 Identities = 229/284 (80%), Positives = 249/284 (87%), Gaps = 4/284 (1%)
 Frame = -2

Query: 1395 MDALRKQLDVLMGANRNGDVAEVNRKYSDRDVCRLYLAGLCPHDLFQLTKMDLGPCSKIH 1216
            MDA+RKQLDVLMGANRNGDV EVNRKY DRDVCRL+L GLCPH+LFQLTKMD+GPC K+H
Sbjct: 1    MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLFLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 1215 SLQLRKEYEEAKAKGLCNYSRELEDMIERLILECERKIQRALKRLEDEDAKAAVAISVSE 1036
            SLQLRKEYEEAKAKG+ NY R+LED+I+RLI+EC+RKI RALKRLEDEDAKAA+AISVSE
Sbjct: 61   SLQLRKEYEEAKAKGVHNYDRDLEDVIDRLIVECDRKIARALKRLEDEDAKAAIAISVSE 120

Query: 1035 VTQTPEILELSKQIKEKLKEVDAFDLEGKTDNKIQALEVVEELRAKRADKQSVLLLDAFN 856
            VTQT E+LELSKQIKEKLKE D FDLEGKTD+KI+ALEVVEELR KRADKQS+LLLDAFN
Sbjct: 121  VTQTAEVLELSKQIKEKLKEADQFDLEGKTDSKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 855  KDRASLPQ----PSQLAPVPVLTPPDPRTQEIINEKLKKAEDLGEKGMIDXXXXXXXXXX 688
            KDRASLPQ    P  LAP+PVL+ PDPRTQE+INEKLKKAEDLGE+GMID          
Sbjct: 181  KDRASLPQPLPNPPPLAPLPVLS-PDPRTQEMINEKLKKAEDLGEQGMIDEAQKALEEAE 239

Query: 687  XXXXLGGRPEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD 556
                L  R EPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD
Sbjct: 240  ALKKLAPRQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD 283



 Score = 53.9 bits (128), Expect(2) = e-131
 Identities = 31/70 (44%), Positives = 36/70 (51%)
 Frame = -1

Query: 505 LADHFGGKLHLGYMQIREKLAEFQXXXXXXXXXXXXXXXXXXXXXXXXXXRAGSRDRERD 326
           LADHFGGKLHLGYMQIREKLAE Q                             S++R RD
Sbjct: 288 LADHFGGKLHLGYMQIREKLAELQEERNKSRKVDRHENDRR------------SKERSRD 335

Query: 325 RDDHGSREKA 296
           RD   S+++A
Sbjct: 336 RDREASKDRA 345


>ref|NP_001239802.1| uncharacterized protein LOC100793888 [Glycine max]
            gi|255636477|gb|ACU18577.1| unknown [Glycine max]
          Length = 414

 Score =  428 bits (1101), Expect(2) = e-126
 Identities = 223/284 (78%), Positives = 243/284 (85%), Gaps = 4/284 (1%)
 Frame = -2

Query: 1395 MDALRKQLDVLMGANRNGDVAEVNRKYSDRDVCRLYLAGLCPHDLFQLTKMDLGPCSKIH 1216
            MDA+RKQLDVLMGANRNGDV EVNRKY DRDVCRLYL GLCPH+LFQLTKMD+GPC K+H
Sbjct: 1    MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 1215 SLQLRKEYEEAKAKGLCNYSRELEDMIERLILECERKIQRALKRLEDEDAKAAVAISVSE 1036
            SLQLRKEYEEAKAKG  NY RELED+I++LI EC+RKI RALKRLED+DAKAA+AISVSE
Sbjct: 61   SLQLRKEYEEAKAKGTDNYDRELEDVIDKLIGECDRKIGRALKRLEDDDAKAAIAISVSE 120

Query: 1035 VTQTPEILELSKQIKEKLKEVDAFDLEGKTDNKIQALEVVEELRAKRADKQSVLLLDAFN 856
            VTQT E+LELSKQIKEKLKE D +DLEGK+D KI+ALEVVEELR KRADKQS+LLLDAFN
Sbjct: 121  VTQTDEVLELSKQIKEKLKEADQYDLEGKSDLKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 855  KDRAS----LPQPSQLAPVPVLTPPDPRTQEIINEKLKKAEDLGEKGMIDXXXXXXXXXX 688
            KDRAS    LP P  LAP+PV+  PD RTQE+INEKLKKAEDLGE+GM+D          
Sbjct: 181  KDRASLPTPLPNPPPLAPLPVVA-PDARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAE 239

Query: 687  XXXXLGGRPEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD 556
                L  R EPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD
Sbjct: 240  ALKKLPARQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD 283



 Score = 52.8 bits (125), Expect(2) = e-126
 Identities = 31/68 (45%), Positives = 34/68 (50%)
 Frame = -1

Query: 505 LADHFGGKLHLGYMQIREKLAEFQXXXXXXXXXXXXXXXXXXXXXXXXXXRAGSRDRERD 326
           LADHFGGKLHLGYMQIREKLAE Q                             S++R RD
Sbjct: 288 LADHFGGKLHLGYMQIREKLAELQEERNKSRKTDRLDDRR-------------SKERSRD 334

Query: 325 RDDHGSRE 302
           RD   SR+
Sbjct: 335 RDRESSRD 342


>ref|XP_003534502.1| PREDICTED: putative RNA-binding protein Luc7-like 2-like [Glycine
            max]
          Length = 414

 Score =  427 bits (1097), Expect(2) = e-126
 Identities = 222/284 (78%), Positives = 242/284 (85%), Gaps = 4/284 (1%)
 Frame = -2

Query: 1395 MDALRKQLDVLMGANRNGDVAEVNRKYSDRDVCRLYLAGLCPHDLFQLTKMDLGPCSKIH 1216
            MDA+RKQLDVLMGANRNGDV EVNRKY DRDVCRLYL GLCPH+LFQLTKMD+GPC K+H
Sbjct: 1    MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 1215 SLQLRKEYEEAKAKGLCNYSRELEDMIERLILECERKIQRALKRLEDEDAKAAVAISVSE 1036
            SLQLRKEYEEAKAKG  NY RELED+I++LI EC+RKI RALKRLED+DAKAA+AISVSE
Sbjct: 61   SLQLRKEYEEAKAKGTDNYDRELEDVIDKLIGECDRKIGRALKRLEDDDAKAAIAISVSE 120

Query: 1035 VTQTPEILELSKQIKEKLKEVDAFDLEGKTDNKIQALEVVEELRAKRADKQSVLLLDAFN 856
            VTQT E+LELSKQIKEKLKE D +DLEGK+D KI+ALEVVEELR KRADKQS+LLLDAFN
Sbjct: 121  VTQTDEVLELSKQIKEKLKEADQYDLEGKSDLKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 855  KDRAS----LPQPSQLAPVPVLTPPDPRTQEIINEKLKKAEDLGEKGMIDXXXXXXXXXX 688
            KDRAS    LP P  LAP+PV+  PD RTQE+INEKLKKAEDLGE+GM+D          
Sbjct: 181  KDRASLPTPLPNPPPLAPLPVVA-PDARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAE 239

Query: 687  XXXXLGGRPEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD 556
                L  R EPVLDSSKYTA DVRITDQKLRVCDICGAFLSVYD
Sbjct: 240  ALKKLPARQEPVLDSSKYTAVDVRITDQKLRVCDICGAFLSVYD 283



 Score = 53.5 bits (127), Expect(2) = e-126
 Identities = 31/69 (44%), Positives = 35/69 (50%)
 Frame = -1

Query: 505 LADHFGGKLHLGYMQIREKLAEFQXXXXXXXXXXXXXXXXXXXXXXXXXXRAGSRDRERD 326
           LADHFGGKLHLGYMQIREKLAE Q                             S++R RD
Sbjct: 288 LADHFGGKLHLGYMQIREKLAELQEERNKSRKTDRLDDRR-------------SKERSRD 334

Query: 325 RDDHGSREK 299
           RD   SR++
Sbjct: 335 RDRESSRDR 343


>ref|XP_003624200.1| Luc7-like protein [Medicago truncatula] gi|355499215|gb|AES80418.1|
            Luc7-like protein [Medicago truncatula]
          Length = 410

 Score =  424 bits (1090), Expect(2) = e-125
 Identities = 220/284 (77%), Positives = 243/284 (85%), Gaps = 4/284 (1%)
 Frame = -2

Query: 1395 MDALRKQLDVLMGANRNGDVAEVNRKYSDRDVCRLYLAGLCPHDLFQLTKMDLGPCSKIH 1216
            MDA+RKQLDVLMGANRNGDV EVNRKY DRDVCRLYL GLCPH+LFQLTKMD+GPC K+H
Sbjct: 1    MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 1215 SLQLRKEYEEAKAKGLCNYSRELEDMIERLILECERKIQRALKRLEDEDAKAAVAISVSE 1036
            SLQLRKEYEEAK+KG  +Y RELED+I++LI EC+RKI RALKRLED+DAKAA+AISVSE
Sbjct: 61   SLQLRKEYEEAKSKGTDSYERELEDVIDKLIGECDRKIGRALKRLEDDDAKAAIAISVSE 120

Query: 1035 VTQTPEILELSKQIKEKLKEVDAFDLEGKTDNKIQALEVVEELRAKRADKQSVLLLDAFN 856
            VTQTPEI+ELSK+I+EKLKE D FDLEG +D KI+ALE+VEELR KRADKQS LLLDAFN
Sbjct: 121  VTQTPEIIELSKEIREKLKEADKFDLEGLSDMKIRALEIVEELRIKRADKQSTLLLDAFN 180

Query: 855  KDRASLPQ----PSQLAPVPVLTPPDPRTQEIINEKLKKAEDLGEKGMIDXXXXXXXXXX 688
            KDRASLPQ    P  LAP+PV+T PD RTQE+INEKLKKAEDLGE+G+ID          
Sbjct: 181  KDRASLPQPLPNPPPLAPLPVVT-PDARTQEMINEKLKKAEDLGEQGLIDEAQKALEEAE 239

Query: 687  XXXXLGGRPEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYD 556
                L  R EP LDSSKYTAADVRITDQKLRVCDICGAFLSVYD
Sbjct: 240  ALKKLPSRQEPPLDSSKYTAADVRITDQKLRVCDICGAFLSVYD 283



 Score = 52.8 bits (125), Expect(2) = e-125
 Identities = 31/69 (44%), Positives = 35/69 (50%)
 Frame = -1

Query: 505 LADHFGGKLHLGYMQIREKLAEFQXXXXXXXXXXXXXXXXXXXXXXXXXXRAGSRDRERD 326
           LADHFGGKLHLGYMQIREKLAE Q                             S++R RD
Sbjct: 288 LADHFGGKLHLGYMQIREKLAELQEERNKSRKIDRLDDRR-------------SKERSRD 334

Query: 325 RDDHGSREK 299
           RD   SR++
Sbjct: 335 RDREPSRDR 343


Top