BLASTX nr result

ID: Dioscorea21_contig00004528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004528
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275515.1| PREDICTED: auxin-responsive protein IAA31 [V...   150   1e-34
ref|XP_003609909.1| Auxin-responsive protein IAA4 [Medicago trun...   149   2e-34
ref|XP_002281145.1| PREDICTED: auxin-responsive protein IAA4 [Vi...   139   2e-31
ref|XP_003567500.1| PREDICTED: auxin-responsive protein IAA4-lik...   133   2e-29
ref|XP_002320253.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29

>ref|XP_002275515.1| PREDICTED: auxin-responsive protein IAA31 [Vitis vinifera]
           gi|297736834|emb|CBI26035.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  150 bits (378), Expect = 1e-34
 Identities = 78/130 (60%), Positives = 89/130 (68%), Gaps = 3/130 (2%)
 Frame = +1

Query: 7   SSSSSIARDQGTDWPPIKQLLRSTLEDKRSHHLHPTTFFVKVNMDGIPIGRKLDLFTLNS 186
           SSS+   RDQ  DWPPIK LLRSTL  K  +    T  FVKV M+GI IGRKLDLF  + 
Sbjct: 69  SSSAPSPRDQRVDWPPIKPLLRSTLTGKADNQRQATNLFVKVYMEGISIGRKLDLFAYSG 128

Query: 187 YETLTKTLCKMFRTSILRPDLAQVPSKNS---HVLIYEDKEGDWMMVGDVPWEMFLATVK 357
           Y+ L  TL  MF+T+I   D     + +S   H+L YEDKEGDWMMVGDVPWEMFL TVK
Sbjct: 129 YDGLVATLSHMFKTTIFCSDPHVGGADHSGKYHILTYEDKEGDWMMVGDVPWEMFLTTVK 188

Query: 358 RVKITRADNC 387
           R+KITRAD C
Sbjct: 189 RLKITRADRC 198


>ref|XP_003609909.1| Auxin-responsive protein IAA4 [Medicago truncatula]
           gi|355510964|gb|AES92106.1| Auxin-responsive protein
           IAA4 [Medicago truncatula]
          Length = 184

 Score =  149 bits (377), Expect = 2e-34
 Identities = 78/130 (60%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1   SLSSSSSIARDQGTDWPPI-KQLLRSTLEDKRSHHLHPTTFFVKVNMDGIPIGRKLDLFT 177
           S SS S + R++  DWPPI K +LRSTL +K+   L     FVKV M+GIPIGRKL+L  
Sbjct: 60  SPSSQSQLPREETCDWPPINKSILRSTLAEKQRPSL-----FVKVYMEGIPIGRKLNLLE 114

Query: 178 LNSYETLTKTLCKMFRTSILRPDLAQVPSKNSHVLIYEDKEGDWMMVGDVPWEMFLATVK 357
            +SY+ L K LC MFRT+IL P+   + S N HVL YED+EGDWMMVGDVPWEMFL++VK
Sbjct: 115 HHSYDGLIKALCHMFRTTILCPNSQPLNSWNFHVLTYEDQEGDWMMVGDVPWEMFLSSVK 174

Query: 358 RVKITRADNC 387
           R+KITRA++C
Sbjct: 175 RLKITRANSC 184


>ref|XP_002281145.1| PREDICTED: auxin-responsive protein IAA4 [Vitis vinifera]
           gi|297744081|emb|CBI37051.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  139 bits (351), Expect = 2e-31
 Identities = 73/122 (59%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
 Frame = +1

Query: 19  SIARDQGTDWPPIKQLLRSTLEDKRSHHLHPTTFFVKVNMDGIPIGRKLDLFTLNSYETL 198
           S  R+Q +DWPPIK LLR  L  +  +  +  TFFVKV M+GIPIGRKLDLF  + Y  L
Sbjct: 53  STPREQQSDWPPIKTLLRKALAGE-GNKCNDATFFVKVYMEGIPIGRKLDLFAHDGYHAL 111

Query: 199 TKTLCKMFRTSILRPDLAQV-PSKNSHVLIYEDKEGDWMMVGDVPWEMFLATVKRVKITR 375
            +TL  MF T+IL  ++  V  S+  HVL YEDKEGDWMMVGDVPWE+FL TVKR+KITR
Sbjct: 112 IRTLDHMFSTTILWAEVDGVLHSEKCHVLTYEDKEGDWMMVGDVPWELFLTTVKRLKITR 171

Query: 376 AD 381
            D
Sbjct: 172 VD 173


>ref|XP_003567500.1| PREDICTED: auxin-responsive protein IAA4-like [Brachypodium
           distachyon]
          Length = 192

 Score =  133 bits (334), Expect = 2e-29
 Identities = 71/143 (49%), Positives = 88/143 (61%), Gaps = 14/143 (9%)
 Frame = +1

Query: 1   SLSSSSSIARDQGT-----------DWPPIKQLLRSTLEDKRSHHLHPTTFFVKVNMDGI 147
           SLSSSSS+   +              WPPIK  LRS L    S      T FVKV M+G+
Sbjct: 50  SLSSSSSLQAAESIPSMPSRNQVLLSWPPIKPFLRSALAASASRRRRQQTLFVKVYMEGL 109

Query: 148 PIGRKLDLFTLNSYETLTKTLCKMFRTSILRPDL--AQVPS-KNSHVLIYEDKEGDWMMV 318
           PIGRKLDL  L+ Y++L   LC MF+T I   D+   QVP  K +H L YED++GDWMMV
Sbjct: 110 PIGRKLDLLLLDGYDSLLVKLCNMFKTPITYADVYQQQVPGVKAAHFLTYEDQDGDWMMV 169

Query: 319 GDVPWEMFLATVKRVKITRADNC 387
           GDVPW +FL +VK+++ITR D C
Sbjct: 170 GDVPWNLFLTSVKKIRITRTDKC 192


>ref|XP_002320253.1| predicted protein [Populus trichocarpa] gi|222861026|gb|EEE98568.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/123 (55%), Positives = 86/123 (69%)
 Frame = +1

Query: 16  SSIARDQGTDWPPIKQLLRSTLEDKRSHHLHPTTFFVKVNMDGIPIGRKLDLFTLNSYET 195
           S+ +  Q +DWPPIK  LR  L  + +      TFFVKV M+GIPIGRKL+L   + Y  
Sbjct: 53  STPSDQQLSDWPPIKPFLRKALASEENE-CSSATFFVKVYMEGIPIGRKLNLLAHDGYHD 111

Query: 196 LTKTLCKMFRTSILRPDLAQVPSKNSHVLIYEDKEGDWMMVGDVPWEMFLATVKRVKITR 375
           L +TL +MF TSIL P++    S   HVL YEDKEGDW++VGDVPWEMFL +V+R+KITR
Sbjct: 112 LIQTLDQMFNTSILWPEMDIEHSGQCHVLTYEDKEGDWLIVGDVPWEMFLPSVRRLKITR 171

Query: 376 ADN 384
           AD+
Sbjct: 172 ADS 174


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