BLASTX nr result

ID: Dioscorea21_contig00004522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004522
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531628.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    62   5e-08
dbj|BAK04456.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07
dbj|BAJ87752.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07

>ref|XP_002531628.1| conserved hypothetical protein [Ricinus communis]
           gi|223528746|gb|EEF30756.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 468

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 28/132 (21%)
 Frame = -3

Query: 321 PAWHQAITRKARTPRPKPG---VITSVKSE-------PVVPDL---EAVSADENNVGEED 181
           P+WHQ  TRKARTPR   G   +++ +K E       P+VP++   + +S ++NN  EE+
Sbjct: 82  PSWHQGFTRKARTPRNGHGNKPLLSLLKIEEKSRNPIPLVPEVGSDDQISHEDNN--EEE 139

Query: 180 QLVYHRVPEFDPLLAEFCSPDPVGGLDDM---------HGFGSKTEE------GELPESG 46
           QL+Y RVP FDP +AE C+P  +    D           G G+ T++      G   ++ 
Sbjct: 140 QLLY-RVPIFDPFVAELCTPTTISNEADQTTTAPFTAGGGNGNDTDQTVAGANGIESKAS 198

Query: 45  SLAGFLPVDDDV 10
            L GFLP + D+
Sbjct: 199 YLHGFLPSETDL 210


>ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|222851278|gb|EEE88825.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
 Frame = -3

Query: 321 PAWHQAITRKARTPRPKPGVITSVKSEPV----VPDLEAVSADE--NNVGEEDQLVYHRV 160
           P+WH   TRKARTPR    V  S  +E +    +P +  V +DE  +   EE+ L+Y RV
Sbjct: 76  PSWHGGFTRKARTPRHGKPVSQSKIAETIRNIPIPLVPEVGSDEISHEDNEEEHLLY-RV 134

Query: 159 PEFDPLLAEFCSPDPV---GGLDDMHGFGSKTEEGELPESGSLAGFLPVDDDV 10
           P FDP +A+ C+   +    G     G    T++     +GSL GFLP D D+
Sbjct: 135 PIFDPFVADLCASTTISNEAGAIVPAGGNDGTDQRVADSNGSLPGFLPSDMDL 187


>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 16/120 (13%)
 Frame = -3

Query: 321 PAWHQAITRKARTPRP-KPGVITSVKSEPV----VPDLEAVSADENNVGEEDQLVYHRVP 157
           P+WHQ  TRKARTPR  KP    + KS+ +    +P +  + ADE +  + ++ + +RVP
Sbjct: 79  PSWHQGFTRKARTPRHGKPAAHPAFKSDELTRNPLPFVPEIGADETSYDDNEEQLLYRVP 138

Query: 156 EFDPLLAEFCS--------PDPVGGLDDMHGFGSKTE---EGELPESGSLAGFLPVDDDV 10
            FDP +AE C+               +     GS+T+    G   +  SL GFLP D D+
Sbjct: 139 IFDPFVAELCASTNSNEAVTTVANDTETADVTGSETKALVAGRGHDVDSLHGFLPSDMDL 198


>dbj|BAK04456.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 410

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
 Frame = -3

Query: 327 DGPAWHQAITRKARTPRPKPGVITS------VKSEPVVPDLEAVSADENNVGE------- 187
           D PAW   + R+ RTPR KPG ++         +   VPDLEA  +    VG+       
Sbjct: 76  DEPAWVHGLKRRPRTPRSKPGTVSKHCAPAKAAAASAVPDLEAEDSGSGIVGDNDDGHGI 135

Query: 186 --EDQLVYHRVPEFDPLLAEFCSPDPV 112
             ED+ + +RVP FDP+LAE  +P PV
Sbjct: 136 EVEDEDLLYRVPVFDPMLAELYNPMPV 162


>dbj|BAJ87752.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 498

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
 Frame = -3

Query: 333 LDDGPAWHQAITRKARTPRPKPGVITSVKSEP-VVPDL---EAVSADENNVGEEDQLVYH 166
           LD  PAW +   RKART RP    +  + S   VVP++   E+ ++DE    EE+QL+Y 
Sbjct: 156 LDVAPAWPK---RKARTRRPTVKSVGQLLSRRLVVPEVGAGESSTSDERRAPEEEQLLY- 211

Query: 165 RVPEFDPLLAEFCSPDPV 112
           RVP FDP L EFCSP P+
Sbjct: 212 RVPVFDPALGEFCSPPPI 229


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