BLASTX nr result

ID: Dioscorea21_contig00004474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004474
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569645.1| PREDICTED: pleiotropic drug resistance prote...   234   6e-60
sp|Q8GU87.3|PDR6_ORYSJ RecName: Full=Pleiotropic drug resistance...   230   1e-58
gb|EEE53977.1| hypothetical protein OsJ_00597 [Oryza sativa Japo...   230   1e-58
gb|EEC70041.1| hypothetical protein OsI_00628 [Oryza sativa Indi...   230   1e-58
emb|CAD59571.1| PDR-like ABC transporter [Oryza sativa Japonica ...   230   1e-58

>ref|XP_003569645.1| PREDICTED: pleiotropic drug resistance protein 6-like [Brachypodium
           distachyon]
          Length = 1437

 Score =  234 bits (597), Expect = 6e-60
 Identities = 114/131 (87%), Positives = 122/131 (93%)
 Frame = +3

Query: 3   LVGSARVLFMDEISTGLDSSTTYQIIKYLRHSTHALDGTTIISLLQPPPETYELFDDVIL 182
           LVGSARVLFMDEISTGLDS+TTYQIIKYLRHSTHALDGTTIISLLQPPPETYELFDDVIL
Sbjct: 339 LVGSARVLFMDEISTGLDSATTYQIIKYLRHSTHALDGTTIISLLQPPPETYELFDDVIL 398

Query: 183 ISEGRIVYQGPRDDALDFFAAMGFKCPERKNVADFLQEVTSKKDQRQYWYDYDRPYRYVP 362
           ISEG+IVYQGPR+ A+DFFAAMGF+CPERKNVADFLQEV SKKDQ+QYW  YD PY++V 
Sbjct: 399 ISEGQIVYQGPREHAVDFFAAMGFRCPERKNVADFLQEVLSKKDQQQYWCQYDYPYQFVS 458

Query: 363 VVKFAEAFHLF 395
           V KFAEAF  F
Sbjct: 459 VSKFAEAFKTF 469


>sp|Q8GU87.3|PDR6_ORYSJ RecName: Full=Pleiotropic drug resistance protein 6
          Length = 1426

 Score =  230 bits (586), Expect = 1e-58
 Identities = 113/131 (86%), Positives = 120/131 (91%)
 Frame = +3

Query: 3   LVGSARVLFMDEISTGLDSSTTYQIIKYLRHSTHALDGTTIISLLQPPPETYELFDDVIL 182
           LVGSARVLFMDEISTGLDS+TTYQIIKYLRHSTHALDGTTIISLLQP PETYELFDDVIL
Sbjct: 328 LVGSARVLFMDEISTGLDSATTYQIIKYLRHSTHALDGTTIISLLQPAPETYELFDDVIL 387

Query: 183 ISEGRIVYQGPRDDALDFFAAMGFKCPERKNVADFLQEVTSKKDQRQYWYDYDRPYRYVP 362
           ISEG+IVYQGPR+ A+DFFA MGF+CPERKNVADFLQEV SKKDQ+QYW  YD PY+YV 
Sbjct: 388 ISEGQIVYQGPREYAVDFFAGMGFRCPERKNVADFLQEVLSKKDQQQYWCHYDYPYQYVS 447

Query: 363 VVKFAEAFHLF 395
           V KFAEAF  F
Sbjct: 448 VSKFAEAFKTF 458


>gb|EEE53977.1| hypothetical protein OsJ_00597 [Oryza sativa Japonica Group]
          Length = 1406

 Score =  230 bits (586), Expect = 1e-58
 Identities = 113/131 (86%), Positives = 120/131 (91%)
 Frame = +3

Query: 3   LVGSARVLFMDEISTGLDSSTTYQIIKYLRHSTHALDGTTIISLLQPPPETYELFDDVIL 182
           LVGSARVLFMDEISTGLDS+TTYQIIKYLRHSTHALDGTTIISLLQP PETYELFDDVIL
Sbjct: 281 LVGSARVLFMDEISTGLDSATTYQIIKYLRHSTHALDGTTIISLLQPAPETYELFDDVIL 340

Query: 183 ISEGRIVYQGPRDDALDFFAAMGFKCPERKNVADFLQEVTSKKDQRQYWYDYDRPYRYVP 362
           ISEG+IVYQGPR+ A+DFFA MGF+CPERKNVADFLQEV SKKDQ+QYW  YD PY+YV 
Sbjct: 341 ISEGQIVYQGPREYAVDFFAGMGFRCPERKNVADFLQEVLSKKDQQQYWCHYDYPYQYVS 400

Query: 363 VVKFAEAFHLF 395
           V KFAEAF  F
Sbjct: 401 VSKFAEAFKTF 411


>gb|EEC70041.1| hypothetical protein OsI_00628 [Oryza sativa Indica Group]
          Length = 1453

 Score =  230 bits (586), Expect = 1e-58
 Identities = 113/131 (86%), Positives = 120/131 (91%)
 Frame = +3

Query: 3   LVGSARVLFMDEISTGLDSSTTYQIIKYLRHSTHALDGTTIISLLQPPPETYELFDDVIL 182
           LVGSARVLFMDEISTGLDS+TTYQIIKYLRHSTHALDGTTIISLLQP PETYELFDDVIL
Sbjct: 328 LVGSARVLFMDEISTGLDSATTYQIIKYLRHSTHALDGTTIISLLQPAPETYELFDDVIL 387

Query: 183 ISEGRIVYQGPRDDALDFFAAMGFKCPERKNVADFLQEVTSKKDQRQYWYDYDRPYRYVP 362
           ISEG+IVYQGPR+ A+DFFA MGF+CPERKNVADFLQEV SKKDQ+QYW  YD PY+YV 
Sbjct: 388 ISEGQIVYQGPREYAVDFFAGMGFRCPERKNVADFLQEVLSKKDQQQYWCHYDYPYQYVS 447

Query: 363 VVKFAEAFHLF 395
           V KFAEAF  F
Sbjct: 448 VSKFAEAFKTF 458


>emb|CAD59571.1| PDR-like ABC transporter [Oryza sativa Japonica Group]
          Length = 1336

 Score =  230 bits (586), Expect = 1e-58
 Identities = 113/131 (86%), Positives = 120/131 (91%)
 Frame = +3

Query: 3   LVGSARVLFMDEISTGLDSSTTYQIIKYLRHSTHALDGTTIISLLQPPPETYELFDDVIL 182
           LVGSARVLFMDEISTGLDS+TTYQIIKYLRHSTHALDGTTIISLLQP PETYELFDDVIL
Sbjct: 328 LVGSARVLFMDEISTGLDSATTYQIIKYLRHSTHALDGTTIISLLQPAPETYELFDDVIL 387

Query: 183 ISEGRIVYQGPRDDALDFFAAMGFKCPERKNVADFLQEVTSKKDQRQYWYDYDRPYRYVP 362
           ISEG+IVYQGPR+ A+DFFA MGF+CPERKNVADFLQEV SKKDQ+QYW  YD PY+YV 
Sbjct: 388 ISEGQIVYQGPREYAVDFFAGMGFRCPERKNVADFLQEVLSKKDQQQYWCHYDYPYQYVS 447

Query: 363 VVKFAEAFHLF 395
           V KFAEAF  F
Sbjct: 448 VSKFAEAFKTF 458


Top