BLASTX nr result

ID: Dioscorea21_contig00004444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004444
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatul...   427   e-117
ref|XP_002513493.1| 40S ribosomal protein S2, putative [Ricinus ...   426   e-117
ref|XP_002513481.1| 40S ribosomal protein S2, putative [Ricinus ...   426   e-117
ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [...   425   e-116
ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [...   424   e-116

>ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatula]
            gi|355524971|gb|AET05425.1| 40S ribosomal protein S2
            [Medicago truncatula]
          Length = 279

 Score =  427 bits (1098), Expect = e-117
 Identities = 213/239 (89%), Positives = 227/239 (94%), Gaps = 1/239 (0%)
 Frame = -3

Query: 1091 EEEEKWVPVTKLGRLVKEGKIKSLEQIYLHSLPVKEHQIIETLIGGPGSGLKDEVMKIMP 912
            EEEEKWVPVTKLGRLVKEGKI+SLEQIYLHSLP+KEHQII+TL+G     LKDEVMKIMP
Sbjct: 44   EEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPT---LKDEVMKIMP 100

Query: 911  VQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWG 732
            VQKQTRAGQRTRFKAFVVVGD+NGHVGLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWG
Sbjct: 101  VQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWG 160

Query: 731  NKIGLPHTVPCKVTGKCGSVTVRLVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK 552
            NKIG PHTVPCKVTGKCGSVTVR+VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK
Sbjct: 161  NKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK 220

Query: 551  TLGNFVKATFDCLMKTYGFLTPDLWTETRFTRSPFQEFTDLLAKPT-KTIIEEPERLEA 378
            TLGNFVKATFDCLMKTYGFLTP+ W ETRF++SPFQE+TDLLAKPT K +I E ER+EA
Sbjct: 221  TLGNFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTAKALILEEERVEA 279


>ref|XP_002513493.1| 40S ribosomal protein S2, putative [Ricinus communis]
            gi|223547401|gb|EEF48896.1| 40S ribosomal protein S2,
            putative [Ricinus communis]
          Length = 270

 Score =  426 bits (1095), Expect = e-117
 Identities = 208/238 (87%), Positives = 224/238 (94%)
 Frame = -3

Query: 1091 EEEEKWVPVTKLGRLVKEGKIKSLEQIYLHSLPVKEHQIIETLIGGPGSGLKDEVMKIMP 912
            EEEEKWVPVTKLGRLVKEGKI+SLEQIYLHSLP+KEHQII+TL+G     LKDEVMKI P
Sbjct: 36   EEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVG---PSLKDEVMKITP 92

Query: 911  VQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWG 732
            VQKQTRAGQRTRFKAFVVVGD NGHVGLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWG
Sbjct: 93   VQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWG 152

Query: 731  NKIGLPHTVPCKVTGKCGSVTVRLVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK 552
            NKIG PHTVPCKVTGKCGSVTVR+VPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTK
Sbjct: 153  NKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTK 212

Query: 551  TLGNFVKATFDCLMKTYGFLTPDLWTETRFTRSPFQEFTDLLAKPTKTIIEEPERLEA 378
            TLGNFVKATFDCL+KTYGFLTPD W ET FT+SPFQE+TDLL KPTK +IE+ ER++A
Sbjct: 213  TLGNFVKATFDCLLKTYGFLTPDFWRETHFTKSPFQEYTDLLGKPTKVLIEDVERVDA 270


>ref|XP_002513481.1| 40S ribosomal protein S2, putative [Ricinus communis]
            gi|223547389|gb|EEF48884.1| 40S ribosomal protein S2,
            putative [Ricinus communis]
          Length = 273

 Score =  426 bits (1095), Expect = e-117
 Identities = 208/238 (87%), Positives = 224/238 (94%)
 Frame = -3

Query: 1091 EEEEKWVPVTKLGRLVKEGKIKSLEQIYLHSLPVKEHQIIETLIGGPGSGLKDEVMKIMP 912
            EEEEKWVPVTKLGRLVKEGKI+SLEQIYLHSLP+KEHQII+TL+G     LKDEVMKI P
Sbjct: 36   EEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVG---PSLKDEVMKITP 92

Query: 911  VQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWG 732
            VQKQTRAGQRTRFKAFVVVGD NGHVGLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWG
Sbjct: 93   VQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWG 152

Query: 731  NKIGLPHTVPCKVTGKCGSVTVRLVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK 552
            NKIG PHTVPCKVTGKCGSVTVR+VPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTK
Sbjct: 153  NKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTK 212

Query: 551  TLGNFVKATFDCLMKTYGFLTPDLWTETRFTRSPFQEFTDLLAKPTKTIIEEPERLEA 378
            TLGNFVKATFDCL+KTYGFLTPD W ET FT+SPFQE+TDLL KPTK +IE+ ER++A
Sbjct: 213  TLGNFVKATFDCLLKTYGFLTPDFWRETHFTKSPFQEYTDLLGKPTKVLIEDVERVDA 270


>ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 272

 Score =  425 bits (1092), Expect = e-116
 Identities = 211/239 (88%), Positives = 227/239 (94%), Gaps = 1/239 (0%)
 Frame = -3

Query: 1091 EEEEKWVPVTKLGRLVKEGKIKSLEQIYLHSLPVKEHQIIETLIGGPGSGLKDEVMKIMP 912
            +EEEKWVPVTKLGRLVKEGKI+SLEQIYLHSLP+KEHQII+TL+G     LKDEVMKIMP
Sbjct: 37   DEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPT---LKDEVMKIMP 93

Query: 911  VQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWG 732
            VQKQTRAGQRTRFKAFVVVGD+NGHVGLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWG
Sbjct: 94   VQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWG 153

Query: 731  NKIGLPHTVPCKVTGKCGSVTVRLVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK 552
            NKIG PHTVPCKVTGKCGSVTVR+VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK
Sbjct: 154  NKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK 213

Query: 551  TLGNFVKATFDCLMKTYGFLTPDLWTETRFTRSPFQEFTDLLAKPT-KTIIEEPERLEA 378
            TLGNFVKATFDCL+KTYGFLTP+ W ETRF++SPFQE+TDLLAKPT K +I E ER+EA
Sbjct: 214  TLGNFVKATFDCLLKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTGKALILEEERVEA 272


>ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 275

 Score =  424 bits (1091), Expect = e-116
 Identities = 211/239 (88%), Positives = 227/239 (94%), Gaps = 1/239 (0%)
 Frame = -3

Query: 1091 EEEEKWVPVTKLGRLVKEGKIKSLEQIYLHSLPVKEHQIIETLIGGPGSGLKDEVMKIMP 912
            EEEEKWVPVTKLGRLVKEG+I+SLEQIYLHSLP+KEHQII+TL+G     LKDEVMKI P
Sbjct: 40   EEEEKWVPVTKLGRLVKEGRIRSLEQIYLHSLPIKEHQIIDTLVGPT---LKDEVMKITP 96

Query: 911  VQKQTRAGQRTRFKAFVVVGDSNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWG 732
            VQKQTRAGQRTRFKAFVVVGD+NGHVGLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWG
Sbjct: 97   VQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWG 156

Query: 731  NKIGLPHTVPCKVTGKCGSVTVRLVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK 552
            NKIG PHTVPCKVTGKCGSVTVR+VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK
Sbjct: 157  NKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTK 216

Query: 551  TLGNFVKATFDCLMKTYGFLTPDLWTETRFTRSPFQEFTDLLAKPT-KTIIEEPERLEA 378
            TLGNFVKATFDCLMKTYGFLTP+ W ETRF++SPFQE+TDLLAKPT KT+I E ER++A
Sbjct: 217  TLGNFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTGKTLILEEERVDA 275


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