BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004408
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06449.1| small nuclear ribonucleoprotein-like protein [Ela...   211   2e-52
ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis...   205   9e-51
ref|XP_002880318.1| hypothetical protein ARALYDRAFT_483945 [Arab...   205   9e-51
ref|NP_001055168.2| Os05g0314100 [Oryza sativa Japonica Group] g...   203   3e-50
gb|AFW58868.1| hypothetical protein ZEAMMB73_850141 [Zea mays]        202   4e-50

>gb|ACF06449.1| small nuclear ribonucleoprotein-like protein [Elaeis guineensis]
          Length = 105

 Score =  211 bits (536), Expect = 2e-52
 Identities = 102/105 (97%), Positives = 104/105 (99%)
 Frame = -1

Query: 590 MEEDANGGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 411
           ME+DAN GKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEDDANAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 60

Query: 410 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 276
           VREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105


>ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145331435|ref|NP_001078076.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145339793|ref|NP_567134.3| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|20196966|gb|AAM14847.1| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|20197310|gb|AAC63620.2| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255773|gb|AEC10867.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255776|gb|AEC10870.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|332646879|gb|AEE80400.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
          Length = 109

 Score =  205 bits (521), Expect = 9e-51
 Identities = 99/105 (94%), Positives = 102/105 (97%)
 Frame = -1

Query: 590 MEEDANGGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 411
           MEED N GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 5   MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 64

Query: 410 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 276
           VREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 65  VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_002880318.1| hypothetical protein ARALYDRAFT_483945 [Arabidopsis lyrata subsp.
           lyrata] gi|21554692|gb|AAM63661.1| small nuclear
           ribonucleoprotein-like protein [Arabidopsis thaliana]
           gi|21592784|gb|AAM64733.1| small nuclear
           ribonucleoprotein-like protein [Arabidopsis thaliana]
           gi|297326157|gb|EFH56577.1| hypothetical protein
           ARALYDRAFT_483945 [Arabidopsis lyrata subsp. lyrata]
          Length = 105

 Score =  205 bits (521), Expect = 9e-51
 Identities = 99/105 (94%), Positives = 102/105 (97%)
 Frame = -1

Query: 590 MEEDANGGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 411
           MEED N GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 60

Query: 410 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 276
           VREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 105


>ref|NP_001055168.2| Os05g0314100 [Oryza sativa Japonica Group]
           gi|54291778|gb|AAV32147.1| putative small nuclear
           ribonucleoprotein D2 [Oryza sativa Japonica Group]
           gi|215768148|dbj|BAH00377.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215768714|dbj|BAH00943.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218196532|gb|EEC78959.1| hypothetical protein
           OsI_19425 [Oryza sativa Indica Group]
           gi|222631079|gb|EEE63211.1| hypothetical protein
           OsJ_18021 [Oryza sativa Japonica Group]
           gi|255676234|dbj|BAF17082.2| Os05g0314100 [Oryza sativa
           Japonica Group]
          Length = 105

 Score =  203 bits (516), Expect = 3e-50
 Identities = 99/105 (94%), Positives = 102/105 (97%)
 Frame = -1

Query: 590 MEEDANGGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 411
           M E+A  GKKEEEEF+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 1   MAEEATQGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 60

Query: 410 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 276
           VREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105


>gb|AFW58868.1| hypothetical protein ZEAMMB73_850141 [Zea mays]
          Length = 104

 Score =  202 bits (515), Expect = 4e-50
 Identities = 99/102 (97%), Positives = 100/102 (98%)
 Frame = -1

Query: 581 DANGGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVRE 402
           D N GKKEEEEF+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVRE
Sbjct: 3   DENAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVRE 62

Query: 401 MWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 276
           MWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 63  MWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 104