BLASTX nr result

ID: Dioscorea21_contig00004396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004396
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteo...    76   3e-12
ref|XP_004149447.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...    76   3e-12
ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteo...    74   1e-11
ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteo...    72   6e-11
gb|ACU19554.1| unknown [Glycine max]                                   72   6e-11

>ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Cucumis sativus]
          Length = 339

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/56 (64%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = +2

Query: 2   PPKTKVWSLWKVEGSRKAKKNLPSEQNISRYGY-EGSDGSDGEKGPPQTEEASTPV 166
           PPKT++W LWKVEGSRKAKKNLPSE  I + GY EG  GSD E+G  Q  E  +PV
Sbjct: 284 PPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339


>ref|XP_004149447.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
           proteolytic subunit 3, chloroplastic-like [Cucumis
           sativus]
          Length = 339

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/56 (64%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = +2

Query: 2   PPKTKVWSLWKVEGSRKAKKNLPSEQNISRYGY-EGSDGSDGEKGPPQTEEASTPV 166
           PPKT++W LWKVEGSRKAKKNLPSE  I + GY EG  GSD E+G  Q  E  +PV
Sbjct: 284 PPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339


>ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic [Vitis vinifera]
          Length = 320

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/55 (63%), Positives = 42/55 (76%)
 Frame = +2

Query: 2   PPKTKVWSLWKVEGSRKAKKNLPSEQNISRYGYEGSDGSDGEKGPPQTEEASTPV 166
           PPKT+VW LWKVEGSRKAKKNLPSE  + + G++   G D EKG  Q +EAS+PV
Sbjct: 269 PPKTRVWGLWKVEGSRKAKKNLPSEHKLLQNGHQ---GGDDEKGTEQEKEASSPV 320


>ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 322

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/55 (61%), Positives = 39/55 (70%)
 Frame = +2

Query: 2   PPKTKVWSLWKVEGSRKAKKNLPSEQNISRYGYEGSDGSDGEKGPPQTEEASTPV 166
           PPKT+VW  WK+EGSRKAKKNLPSE    +   +GS GSDG+KG  Q  E  TPV
Sbjct: 268 PPKTRVWDQWKIEGSRKAKKNLPSEHKFLQNASKGSQGSDGDKGTVQ--EGETPV 320


>gb|ACU19554.1| unknown [Glycine max]
          Length = 322

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/55 (61%), Positives = 39/55 (70%)
 Frame = +2

Query: 2   PPKTKVWSLWKVEGSRKAKKNLPSEQNISRYGYEGSDGSDGEKGPPQTEEASTPV 166
           PPKT+VW  WK+EGSRKAKKNLPSE    +   +GS GSDG+KG  Q  E  TPV
Sbjct: 268 PPKTRVWDQWKIEGSRKAKKNLPSEHKFLQNASKGSQGSDGDKGTVQ--EGETPV 320


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