BLASTX nr result
ID: Dioscorea21_contig00004370
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00004370
(946 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFJ79551.1| double stranded RNA binding protein 3 [Oryza sati... 325 1e-86
gb|EEE62351.1| hypothetical protein OsJ_17140 [Oryza sativa Japo... 325 1e-86
ref|NP_001054665.1| Os05g0150400 [Oryza sativa Japonica Group] g... 325 1e-86
ref|XP_002440600.1| hypothetical protein SORBIDRAFT_09g003860 [S... 315 1e-83
ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding prote... 310 4e-82
>gb|AFJ79551.1| double stranded RNA binding protein 3 [Oryza sativa Indica Group]
Length = 593
Score = 325 bits (833), Expect = 1e-86
Identities = 175/318 (55%), Positives = 210/318 (66%), Gaps = 6/318 (1%)
Frame = -3
Query: 944 KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPTFCTTLRQAEHAAAE 765
KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESP FC+TLR AEHAAAE
Sbjct: 3 KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAAAE 62
Query: 764 VALNTLSKRGPSKSLASRVLDETGVYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFSCT 585
VALN LSKRGPS SLA++VLDETG+YKNLLQETAHRAGLKLPVYTTIRSGPGHTPVF+CT
Sbjct: 63 VALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFTCT 122
Query: 584 VELAGLSFDGDPSXXXXXXXXXXXXXXXXALKKLPNLXXXXXXXXXXXXXXXXXXQVVIA 405
VELAG++F G+P LK+LP + Q+++A
Sbjct: 123 VELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQIIVA 182
Query: 404 RALASLCQTEENKSSSQSDRQHLRQKPASVRRDTRSIFNASFHAK-HYEGVAYPNLSPEV 228
R LASL QT K+ Q ++Q +P+S RR + NASF+ + H + AYP++ PE
Sbjct: 183 RTLASLNQTNGGKTPQQKEKQQSSNRPSS-RRPSYPKSNASFYGRLHLQKHAYPSVPPEQ 241
Query: 227 MMYQMWQQEQAS-----LLTIPTPDMSDPRLLPFFLSTFQPSQGQYFLRIEQDLINPAPC 63
MY MW Q QA+ +PT + P L + P +GQ+ + QD + PC
Sbjct: 242 AMYHMWHQVQATQQKPHFPMVPTMGSTGFPPPPTVLHMYPPPRGQFTMPSSQDGLGLIPC 301
Query: 62 FSKPSLGMPLYFSEYPLS 9
+ + S +P YFS YP S
Sbjct: 302 YPEASPVLPRYFSPYPAS 319
>gb|EEE62351.1| hypothetical protein OsJ_17140 [Oryza sativa Japonica Group]
Length = 606
Score = 325 bits (833), Expect = 1e-86
Identities = 175/318 (55%), Positives = 210/318 (66%), Gaps = 6/318 (1%)
Frame = -3
Query: 944 KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPTFCTTLRQAEHAAAE 765
KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESP FC+TLR AEHAAAE
Sbjct: 16 KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAAAE 75
Query: 764 VALNTLSKRGPSKSLASRVLDETGVYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFSCT 585
VALN LSKRGPS SLA++VLDETG+YKNLLQETAHRAGLKLPVYTTIRSGPGHTPVF+CT
Sbjct: 76 VALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFTCT 135
Query: 584 VELAGLSFDGDPSXXXXXXXXXXXXXXXXALKKLPNLXXXXXXXXXXXXXXXXXXQVVIA 405
VELAG++F G+P LK+LP + Q+++A
Sbjct: 136 VELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQIIVA 195
Query: 404 RALASLCQTEENKSSSQSDRQHLRQKPASVRRDTRSIFNASFHAK-HYEGVAYPNLSPEV 228
R LASL QT K+ Q ++Q +P+S RR + NASF+ + H + AYP++ PE
Sbjct: 196 RTLASLNQTNGGKTPQQKEKQQSSNRPSS-RRPSYPKSNASFYGRLHLQKHAYPSVPPEQ 254
Query: 227 MMYQMWQQEQAS-----LLTIPTPDMSDPRLLPFFLSTFQPSQGQYFLRIEQDLINPAPC 63
MY MW Q QA+ +PT + P L + P +GQ+ + QD + PC
Sbjct: 255 AMYHMWHQVQATQQKPHFPMVPTMGSTGFPPPPTVLHMYPPPRGQFTMPSSQDGLGLIPC 314
Query: 62 FSKPSLGMPLYFSEYPLS 9
+ + S +P YFS YP S
Sbjct: 315 YPEASPVLPRYFSPYPAS 332
>ref|NP_001054665.1| Os05g0150400 [Oryza sativa Japonica Group]
gi|122169532|sp|Q0DKP4.1|DRB2_ORYSJ RecName:
Full=Double-stranded RNA-binding protein 2; AltName:
Full=dsRNA-binding protein 2; AltName:
Full=dsRNA-binding protein 3; Short=OsDRB3
gi|113578216|dbj|BAF16579.1| Os05g0150400 [Oryza sativa
Japonica Group]
Length = 593
Score = 325 bits (833), Expect = 1e-86
Identities = 175/318 (55%), Positives = 210/318 (66%), Gaps = 6/318 (1%)
Frame = -3
Query: 944 KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPTFCTTLRQAEHAAAE 765
KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESP FC+TLR AEHAAAE
Sbjct: 3 KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAAAE 62
Query: 764 VALNTLSKRGPSKSLASRVLDETGVYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFSCT 585
VALN LSKRGPS SLA++VLDETG+YKNLLQETAHRAGLKLPVYTTIRSGPGHTPVF+CT
Sbjct: 63 VALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFTCT 122
Query: 584 VELAGLSFDGDPSXXXXXXXXXXXXXXXXALKKLPNLXXXXXXXXXXXXXXXXXXQVVIA 405
VELAG++F G+P LK+LP + Q+++A
Sbjct: 123 VELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQIIVA 182
Query: 404 RALASLCQTEENKSSSQSDRQHLRQKPASVRRDTRSIFNASFHAK-HYEGVAYPNLSPEV 228
R LASL QT K+ Q ++Q +P+S RR + NASF+ + H + AYP++ PE
Sbjct: 183 RTLASLNQTNGGKTPQQKEKQQSSNRPSS-RRPSYPKSNASFYGRLHLQKHAYPSVPPEQ 241
Query: 227 MMYQMWQQEQAS-----LLTIPTPDMSDPRLLPFFLSTFQPSQGQYFLRIEQDLINPAPC 63
MY MW Q QA+ +PT + P L + P +GQ+ + QD + PC
Sbjct: 242 AMYHMWHQVQATQQKPHFPMVPTMGSTGFPPPPTVLHMYPPPRGQFTMPSSQDGLGLIPC 301
Query: 62 FSKPSLGMPLYFSEYPLS 9
+ + S +P YFS YP S
Sbjct: 302 YPEASPVLPRYFSPYPAS 319
>ref|XP_002440600.1| hypothetical protein SORBIDRAFT_09g003860 [Sorghum bicolor]
gi|241945885|gb|EES19030.1| hypothetical protein
SORBIDRAFT_09g003860 [Sorghum bicolor]
Length = 573
Score = 315 bits (807), Expect = 1e-83
Identities = 168/317 (52%), Positives = 205/317 (64%), Gaps = 5/317 (1%)
Frame = -3
Query: 944 KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPTFCTTLRQAEHAAAE 765
KNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE FESP FC+TLRQAEHAAAE
Sbjct: 3 KNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEMFESPAFCSTLRQAEHAAAE 62
Query: 764 VALNTLSKRGPSKSLASRVLDETGVYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFSCT 585
VALN LSKRGPS +LA++VLDETG+YKNLLQETAHRAGLKLP+YTTIRSGPGHTPVF+CT
Sbjct: 63 VALNELSKRGPSSTLAAKVLDETGIYKNLLQETAHRAGLKLPIYTTIRSGPGHTPVFTCT 122
Query: 584 VELAGLSFDGDPSXXXXXXXXXXXXXXXXALKKLPNLXXXXXXXXXXXXXXXXXXQVVIA 405
VELAG +F G+P LK+LP + QV++
Sbjct: 123 VELAGKTFTGNPGKTKKQAQKNAAMAAWSDLKQLPRIGEPSSSSCPADQDDEEQEQVIVT 182
Query: 404 RALASLCQTEENKSSSQSDRQHLRQKPASVRRDTRSIFNASFHAKHYEGVAYPNLSPEVM 225
R LASL Q K Q ++Q +P+S R + N SF+ + + AYP++ P+
Sbjct: 183 RTLASLNQANIGKVPHQKEKQQTNNRPSSQRSYPKP--NTSFYRPYMQNQAYPSVPPDQA 240
Query: 224 MYQMWQQEQASLLT--IP-TPDMSDPRLLP--FFLSTFQPSQGQYFLRIEQDLINPAPCF 60
MY +W + QA+ T P P M + R P L + P +GQ+ QD + PCF
Sbjct: 241 MYHLWDRMQATQPTPRFPVVPTMGNTRFPPPAAMLPMYPPPRGQFSNPANQDALGLLPCF 300
Query: 59 SKPSLGMPLYFSEYPLS 9
+ + +P YFS YP+S
Sbjct: 301 PEAAPAVPRYFSPYPVS 317
>ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding protein 2 [Vitis vinifera]
Length = 532
Score = 310 bits (793), Expect = 4e-82
Identities = 175/316 (55%), Positives = 205/316 (64%), Gaps = 7/316 (2%)
Frame = -3
Query: 944 KNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPTFCTTLRQAEHAAAE 765
KNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGETFESP+FC+TLRQAEHAAAE
Sbjct: 3 KNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGETFESPSFCSTLRQAEHAAAE 62
Query: 764 VALNTLSKRGPSKSLASRVLDETGVYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFSCT 585
VALNTL+ RGPSK+LA+RVLDETGVYKNLLQETAHRAGL LPVYTTIRSGPGH PVFSCT
Sbjct: 63 VALNTLANRGPSKALAARVLDETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHVPVFSCT 122
Query: 584 VELAGLSFDGDPSXXXXXXXXXXXXXXXXALKKLPNLXXXXXXXXXXXXXXXXXXQVVIA 405
VE+AG+SF G+ + AL+KL + QV+IA
Sbjct: 123 VEIAGMSFTGEAAKTKKQAQKNAAMTAWSALRKLES------------ECNEEQEQVIIA 170
Query: 404 RALASLCQTEENKSSSQSDRQHLRQKPASVRRDTRSIFNASFHAKHYEGVAYPNLSPEVM 225
R LASL ++ N + Q+DRQH +Q+ S+ RD+ S + Y+ P+ PE+
Sbjct: 171 RVLASLRPSKSN--NKQNDRQHGQQRSGSICRDSTPQTPISC-SMQYQSTVDPSFFPEMA 227
Query: 224 MYQMWQQEQAS-----LLTIPTP--DMSDPRLLPFFLSTFQPSQGQYFLRIEQDLINPAP 66
MYQMWQQEQ + LL +P P P PF S F+P YF Q I P
Sbjct: 228 MYQMWQQEQLAQLQNRLLALPVPLAPQPSPHFFPFMQSMFRPDHCLYFPTEVQQPITMGP 287
Query: 65 CFSKPSLGMPLYFSEY 18
FS + G Y S +
Sbjct: 288 RFSIAASGSSFYLSNH 303