BLASTX nr result
ID: Dioscorea21_contig00004364
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00004364
(650 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea ma... 152 2e-43
gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| un... 152 2e-43
emb|CBI20846.3| unnamed protein product [Vitis vinifera] 158 3e-42
ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2... 158 1e-36
dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgar... 157 2e-36
>ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea mays]
gi|194690372|gb|ACF79270.1| unknown [Zea mays]
gi|219884485|gb|ACL52617.1| unknown [Zea mays]
gi|219885259|gb|ACL53004.1| unknown [Zea mays]
gi|219885461|gb|ACL53105.1| unknown [Zea mays]
gi|238010394|gb|ACR36232.1| unknown [Zea mays]
gi|414880676|tpg|DAA57807.1| TPA: putative regulator of
chromosome condensation (RCC1) family protein [Zea mays]
Length = 556
Score = 152 bits (383), Expect(2) = 2e-43
Identities = 72/116 (62%), Positives = 87/116 (75%), Gaps = 7/116 (6%)
Frame = -3
Query: 636 CWTFGLGENGQLGHGTTASECLPRAVKGLSEDAVLVSLDCGLFHTSVVSAAGDVLSWGME 457
CWTFGLG+ GQLGHGTTA+ C P+ V GL + L+SLDCGLFHT+VVS+ G+V WGME
Sbjct: 275 CWTFGLGDKGQLGHGTTATICSPQPVDGLPTGSFLISLDCGLFHTTVVSSDGEVWCWGME 334
Query: 456 KGLGLCPDASFTGDDAGDALSPIRMHRAE-------GVKQVACGAAHTLVVTDDGH 310
+GLGLCPDASF+G D GDAL PIR+ E G Q+ACGAAHT++V DG+
Sbjct: 335 RGLGLCPDASFSGVDEGDALYPIRVQSPETNGFKFLGPVQIACGAAHTVLVAGDGY 390
Score = 50.1 bits (118), Expect(2) = 2e-43
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 34/128 (26%)
Frame = -1
Query: 305 ENNMDAENARTEPHNREA--GKLTGTSEEIEFLRSKLS---------------------- 198
E+ M +R H KL+ SEE++FLRSKL+
Sbjct: 428 EDQMGGSTSRVNDHTSTELEQKLSAASEELQFLRSKLTLMERYANILHISIFRKPLDERA 487
Query: 197 ---GMHHCCMFWMIGTFLNLYKAG-------MRMFYSSMLASVKDRLLKRRVQKMVKETL 48
+ +F + F N+ A + +FY SML+ VKD+LLKRRV++MV++ +
Sbjct: 488 LPRSLQESSVFDIRKEFENILDAADTDELNRLEIFYRSMLSGVKDKLLKRRVREMVQQCI 547
Query: 47 KSLSAGTK 24
SLS K
Sbjct: 548 ISLSREAK 555
>gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| unknown [Zea mays]
gi|414880673|tpg|DAA57804.1| TPA: putative regulator of
chromosome condensation (RCC1) family protein isoform 1
[Zea mays] gi|414880674|tpg|DAA57805.1| TPA: putative
regulator of chromosome condensation (RCC1) family
protein isoform 2 [Zea mays]
Length = 416
Score = 152 bits (383), Expect(2) = 2e-43
Identities = 72/116 (62%), Positives = 87/116 (75%), Gaps = 7/116 (6%)
Frame = -3
Query: 636 CWTFGLGENGQLGHGTTASECLPRAVKGLSEDAVLVSLDCGLFHTSVVSAAGDVLSWGME 457
CWTFGLG+ GQLGHGTTA+ C P+ V GL + L+SLDCGLFHT+VVS+ G+V WGME
Sbjct: 135 CWTFGLGDKGQLGHGTTATICSPQPVDGLPTGSFLISLDCGLFHTTVVSSDGEVWCWGME 194
Query: 456 KGLGLCPDASFTGDDAGDALSPIRMHRAE-------GVKQVACGAAHTLVVTDDGH 310
+GLGLCPDASF+G D GDAL PIR+ E G Q+ACGAAHT++V DG+
Sbjct: 195 RGLGLCPDASFSGVDEGDALYPIRVQSPETNGFKFLGPVQIACGAAHTVLVAGDGY 250
Score = 50.1 bits (118), Expect(2) = 2e-43
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 34/128 (26%)
Frame = -1
Query: 305 ENNMDAENARTEPHNREA--GKLTGTSEEIEFLRSKLS---------------------- 198
E+ M +R H KL+ SEE++FLRSKL+
Sbjct: 288 EDQMGGSTSRVNDHTSTELEQKLSAASEELQFLRSKLTLMERYANILHISIFRKPLDERA 347
Query: 197 ---GMHHCCMFWMIGTFLNLYKAG-------MRMFYSSMLASVKDRLLKRRVQKMVKETL 48
+ +F + F N+ A + +FY SML+ VKD+LLKRRV++MV++ +
Sbjct: 348 LPRSLQESSVFDIRKEFENILDAADTDELNRLEIFYRSMLSGVKDKLLKRRVREMVQQCI 407
Query: 47 KSLSAGTK 24
SLS K
Sbjct: 408 ISLSREAK 415
>emb|CBI20846.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 158 bits (399), Expect(2) = 3e-42
Identities = 77/112 (68%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Frame = -3
Query: 639 MCWTFGLGENGQLGHGTTASECLPRAVKGLSEDAVLVSLDCGLFHTSVVSAAGDVLSWGM 460
MCWTFGLG+NGQLGHGTT LP VK L E LVS+DCGLFHTSVVS+AG+V SWGM
Sbjct: 187 MCWTFGLGDNGQLGHGTTKGISLPEPVKDLPEHRFLVSVDCGLFHTSVVSSAGEVWSWGM 246
Query: 459 EKGLGLCPDASFTGDDAGDALSPIRM-HRAEGVKQVACGAAHTLVVTDDGHE 307
EKGLGLCPDASFTG D GDA SP+ + QVACGAAHT++V DDG++
Sbjct: 247 EKGLGLCPDASFTGTDPGDAPSPLLYGSKFRDPVQVACGAAHTVLVADDGYK 298
Score = 39.7 bits (91), Expect(2) = 3e-42
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 32/103 (31%)
Frame = -1
Query: 242 TGTSEEIEFLRSKLSGMHHCCMFWMIGTF----------LNLYKAG-------------- 135
+GT++E++ L SKLS M F ++L +G
Sbjct: 338 SGTTKEMKLLHSKLSTMERYASILHGSIFGKPFEEQDIPISLQNSGFFDIAKEWENMLES 397
Query: 134 --------MRMFYSSMLASVKDRLLKRRVQKMVKETLKSLSAG 30
+ FY +MLA VKD+L+KRR+Q+++KE L + G
Sbjct: 398 ADRGKLVMLEKFYRNMLAGVKDKLMKRRIQEIIKECLPPPATG 440
>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 564
Score = 158 bits (399), Expect = 1e-36
Identities = 77/112 (68%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Frame = -3
Query: 639 MCWTFGLGENGQLGHGTTASECLPRAVKGLSEDAVLVSLDCGLFHTSVVSAAGDVLSWGM 460
MCWTFGLG+NGQLGHGTT LP VK L E LVS+DCGLFHTSVVS+AG+V SWGM
Sbjct: 285 MCWTFGLGDNGQLGHGTTKGISLPEPVKDLPEHRFLVSVDCGLFHTSVVSSAGEVWSWGM 344
Query: 459 EKGLGLCPDASFTGDDAGDALSPIRM-HRAEGVKQVACGAAHTLVVTDDGHE 307
EKGLGLCPDASFTG D GDA SP+ + QVACGAAHT++V DDG++
Sbjct: 345 EKGLGLCPDASFTGTDPGDAPSPLLYGSKFRDPVQVACGAAHTVLVADDGYK 396
>dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 566
Score = 157 bits (396), Expect = 2e-36
Identities = 74/116 (63%), Positives = 89/116 (76%), Gaps = 7/116 (6%)
Frame = -3
Query: 636 CWTFGLGENGQLGHGTTASECLPRAVKGLSEDAVLVSLDCGLFHTSVVSAAGDVLSWGME 457
CWTFG+G+NGQLGHGTTA+ C P+ V GL + L+SLDCGLFHT+VVS+ G+V WGME
Sbjct: 278 CWTFGIGDNGQLGHGTTATTCSPQPVDGLPTGSFLISLDCGLFHTAVVSSDGEVWCWGME 337
Query: 456 KGLGLCPDASFTGDDAGDALSPIRMHRAE-------GVKQVACGAAHTLVVTDDGH 310
+GLGLCPDASF+G DAGDAL PIR+ E G QVACGAAHT++V DG+
Sbjct: 338 RGLGLCPDASFSGMDAGDALHPIRVQSPETNGFKFLGPVQVACGAAHTVLVAGDGY 393