BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004360
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD18921.1| RNA-binding protein precursor [Persea americana]      118   4e-25
ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like...   115   5e-24
gb|ACF22879.1| RNA-binding protein [Glycine max]                      115   5e-24
ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|1...   114   8e-24
emb|CBI14910.3| unnamed protein product [Vitis vinifera]              113   1e-23

>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
          Length = 300

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/71 (83%), Positives = 65/71 (91%)
 Frame = -1

Query: 232 RLEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVN 53
           RLEQVFSE+GKV EARVV DRETGRSRGFGFV M+TQTE+DDAIAALDG +LDGRA+RVN
Sbjct: 230 RLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAALDGQSLDGRAIRVN 289

Query: 52  VAEERPRPGSF 20
           VAE+RPR  SF
Sbjct: 290 VAEDRPRRASF 300



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = -1

Query: 229 LEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVNV 50
           L ++F + G VE A V+ +RET +SRGFGFV M+T  E + A+   + + ++GR L VN 
Sbjct: 137 LAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMFNRYDINGRLLTVNK 196

Query: 49  AEER 38
           A  R
Sbjct: 197 AAPR 200


>ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
           gi|255645622|gb|ACU23305.1| unknown [Glycine max]
          Length = 300

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/71 (76%), Positives = 66/71 (92%)
 Frame = -1

Query: 232 RLEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVN 53
           RLEQ+FSE+GKVE+ARVV DRETGRSRGFGFV M+++T+M+DAIAALDG +LDGRA+RVN
Sbjct: 230 RLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRVN 289

Query: 52  VAEERPRPGSF 20
           VA +RP+P SF
Sbjct: 290 VAAQRPKPSSF 300



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
 Frame = -1

Query: 232 RLEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVN 53
           +L  +F + G VE A V+ +R T RSRGFGFV M+T  E++ A+    G+ L+GR L VN
Sbjct: 137 KLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKMFSGYELNGRVLTVN 196

Query: 52  VA-------EERPRP 29
            A       E  PRP
Sbjct: 197 KAAPKGAQPERPPRP 211


>gb|ACF22879.1| RNA-binding protein [Glycine max]
          Length = 302

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/71 (76%), Positives = 66/71 (92%)
 Frame = -1

Query: 232 RLEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVN 53
           RLEQ+FSE+GKVE+ARVV DRETGRSRGFGFV M+++T+M+DAIAALDG +LDGRA+RVN
Sbjct: 232 RLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRVN 291

Query: 52  VAEERPRPGSF 20
           VA +RP+P SF
Sbjct: 292 VAAQRPKPSSF 302



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
 Frame = -1

Query: 232 RLEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVN 53
           +L  +F + G VE A V+ +R T RSRGFGFV M+T  E++ A+    G+ L+GR L VN
Sbjct: 139 KLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKMFSGYELNGRVLTVN 198

Query: 52  VA-------EERPRP 29
            A       E  PRP
Sbjct: 199 KAAPKGAQPERPPRP 213


>ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|118486956|gb|ABK95311.1|
           unknown [Populus trichocarpa]
           gi|222845826|gb|EEE83373.1| predicted protein [Populus
           trichocarpa]
          Length = 276

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/71 (76%), Positives = 65/71 (91%)
 Frame = -1

Query: 232 RLEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVN 53
           RLEQVFSE+G+V  ARVVCDRETGRSRGFGFV M+++TE++DAIAALDG +LDGRA+ VN
Sbjct: 206 RLEQVFSEHGQVVNARVVCDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAITVN 265

Query: 52  VAEERPRPGSF 20
           +A+ERPR GSF
Sbjct: 266 IAQERPRRGSF 276



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/64 (46%), Positives = 40/64 (62%)
 Frame = -1

Query: 229 LEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVNV 50
           L Q+F + G VE A ++ +RET +SRGFGFV M+T  E + AI     + L+GR L VN 
Sbjct: 114 LAQLFDQAGTVEVAEIIYNRETDQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGRFLTVNK 173

Query: 49  AEER 38
           A  R
Sbjct: 174 AAPR 177


>emb|CBI14910.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/71 (78%), Positives = 63/71 (88%)
 Frame = -1

Query: 232 RLEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVN 53
           RLEQVFSE+GKV EARVV DRETGRSRGFGFV M++QTE++DAIAA DG TLDGR +RVN
Sbjct: 236 RLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVN 295

Query: 52  VAEERPRPGSF 20
           VAEERPR  +F
Sbjct: 296 VAEERPRRSAF 306



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/65 (49%), Positives = 41/65 (63%)
 Frame = -1

Query: 232 RLEQVFSEYGKVEEARVVCDRETGRSRGFGFVKMATQTEMDDAIAALDGHTLDGRALRVN 53
           RL ++F + G VE A V+ +RET RSRGFGFV M+T  E + A+     + LDGR L VN
Sbjct: 142 RLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVN 201

Query: 52  VAEER 38
            A  R
Sbjct: 202 KAAPR 206