BLASTX nr result
ID: Dioscorea21_contig00004344
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00004344
(566 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34644.3| unnamed protein product [Vitis vinifera] 115 6e-32
gb|AAK39576.1|AC025296_11 putative transcription factor [Oryza s... 123 1e-31
gb|EEC67312.1| hypothetical protein OsI_34323 [Oryza sativa Indi... 123 1e-31
gb|AAP54624.2| expressed protein [Oryza sativa Japonica Group] 123 1e-31
gb|AER42647.1| GTL1 [Populus tremula x Populus alba] 118 4e-31
>emb|CBI34644.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 115 bits (288), Expect(2) = 6e-32
Identities = 56/86 (65%), Positives = 69/86 (80%), Gaps = 3/86 (3%)
Frame = +3
Query: 18 LVLVPE---PSHEIAVTGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPLWEE 188
++ +PE P +I+ GG E+ +SSRWPK EV ALI LRSGL+S+Y EAGPKGPLWEE
Sbjct: 317 VMAIPEQQVPPQDISSGGGSLES-SSSRWPKTEVLALINLRSGLDSRYQEAGPKGPLWEE 375
Query: 189 ISSEMQRLGYNRSSKRCKEKWENINK 266
IS+ MQ++GY RS+KRCKEKWENINK
Sbjct: 376 ISAGMQQMGYKRSAKRCKEKWENINK 401
Score = 47.4 bits (111), Expect(2) = 6e-32
Identities = 25/44 (56%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = +1
Query: 376 CPYFHQLDALYRKKHGGSSSNL----RSTTVEPETTSAQQQERP 495
CPYFHQLDALYRKK GS+S ST V P QQQ++P
Sbjct: 420 CPYFHQLDALYRKKLLGSTSGSGGSGGSTYVNPNRPEEQQQQQP 463
Score = 73.9 bits (180), Expect = 2e-11
Identities = 29/62 (46%), Positives = 49/62 (79%)
Frame = +3
Query: 81 ASSRWPKAEVHALIQLRSGLESKYTEAGPKGPLWEEISSEMQRLGYNRSSKRCKEKWENI 260
+ +RWP+ E AL+++RS ++ + +A KGPLWE++S ++ LGY+RS+K+CKEK+EN+
Sbjct: 99 SGNRWPRQETLALLKIRSEMDVAFRDATLKGPLWEDVSRKLAELGYSRSAKKCKEKFENV 158
Query: 261 NK 266
+K
Sbjct: 159 HK 160
>gb|AAK39576.1|AC025296_11 putative transcription factor [Oryza sativa Japonica Group]
gi|110289412|gb|ABB47886.2| expressed protein [Oryza
sativa Japonica Group]
Length = 822
Score = 123 bits (309), Expect(2) = 1e-31
Identities = 59/89 (66%), Positives = 72/89 (80%), Gaps = 2/89 (2%)
Frame = +3
Query: 6 SSSELVLVPEPSHEIAV--TGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPL 179
SS ++V+ +H+ +GGG +SSRWPKAEVHALIQLRS L+++Y EAGPKGPL
Sbjct: 480 SSMDIVMTAAEAHDAGYDGSGGGGGQPSSSRWPKAEVHALIQLRSNLDNRYQEAGPKGPL 539
Query: 180 WEEISSEMQRLGYNRSSKRCKEKWENINK 266
WEEIS+ M+RLGY+RSSKRCKEKWENINK
Sbjct: 540 WEEISAGMRRLGYSRSSKRCKEKWENINK 568
Score = 38.1 bits (87), Expect(2) = 1e-31
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 376 CPYFHQLDALYRKKHGGSSSNLRSTTVEPETTSAQQQERPLAI 504
CPYFHQLDALYR K +SS+ + P + E + +
Sbjct: 587 CPYFHQLDALYRNKAALNSSSSSAAAAAPALPPPEHAEPAVTV 629
Score = 73.6 bits (179), Expect = 2e-11
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 16/85 (18%)
Frame = +3
Query: 60 GGGFETVA----------------SSRWPKAEVHALIQLRSGLESKYTEAGPKGPLWEEI 191
GGGF+ A +RWP+ E AL+++RS +++ + +A KGPLWEE+
Sbjct: 171 GGGFDAEALAAAAVGEEGASGGAGGNRWPRQETLALLKIRSDMDAAFRDATLKGPLWEEV 230
Query: 192 SSEMQRLGYNRSSKRCKEKWENINK 266
S ++ GY RS+K+CKEK+EN++K
Sbjct: 231 SRKLAEEGYRRSAKKCKEKFENVHK 255
>gb|EEC67312.1| hypothetical protein OsI_34323 [Oryza sativa Indica Group]
Length = 692
Score = 123 bits (309), Expect(2) = 1e-31
Identities = 59/89 (66%), Positives = 72/89 (80%), Gaps = 2/89 (2%)
Frame = +3
Query: 6 SSSELVLVPEPSHEIAV--TGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPL 179
SS ++V+ +H+ +GGG +SSRWPKAEVHALIQLRS L+++Y EAGPKGPL
Sbjct: 350 SSMDIVMTAAEAHDAGYDGSGGGGGQPSSSRWPKAEVHALIQLRSNLDNRYQEAGPKGPL 409
Query: 180 WEEISSEMQRLGYNRSSKRCKEKWENINK 266
WEEIS+ M+RLGY+RSSKRCKEKWENINK
Sbjct: 410 WEEISAGMRRLGYSRSSKRCKEKWENINK 438
Score = 38.1 bits (87), Expect(2) = 1e-31
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 376 CPYFHQLDALYRKKHGGSSSNLRSTTVEPETTSAQQQERPLAI 504
CPYFHQLDALYR K +SS+ + P + E + +
Sbjct: 457 CPYFHQLDALYRNKAALNSSSSAAAAAAPALPPPEHAEPAVTV 499
Score = 73.6 bits (179), Expect = 2e-11
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 16/85 (18%)
Frame = +3
Query: 60 GGGFETVA----------------SSRWPKAEVHALIQLRSGLESKYTEAGPKGPLWEEI 191
GGGF+ A +RWP+ E AL+++RS +++ + +A KGPLWEE+
Sbjct: 69 GGGFDAEALAAAAVGEEGASGGAVGNRWPRQETLALLKIRSDMDAAFRDATLKGPLWEEV 128
Query: 192 SSEMQRLGYNRSSKRCKEKWENINK 266
S ++ GY RS+K+CKEK+EN++K
Sbjct: 129 SRKLAEEGYRRSAKKCKEKFENVHK 153
>gb|AAP54624.2| expressed protein [Oryza sativa Japonica Group]
Length = 596
Score = 123 bits (309), Expect(2) = 1e-31
Identities = 59/89 (66%), Positives = 72/89 (80%), Gaps = 2/89 (2%)
Frame = +3
Query: 6 SSSELVLVPEPSHEIAV--TGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPL 179
SS ++V+ +H+ +GGG +SSRWPKAEVHALIQLRS L+++Y EAGPKGPL
Sbjct: 254 SSMDIVMTAAEAHDAGYDGSGGGGGQPSSSRWPKAEVHALIQLRSNLDNRYQEAGPKGPL 313
Query: 180 WEEISSEMQRLGYNRSSKRCKEKWENINK 266
WEEIS+ M+RLGY+RSSKRCKEKWENINK
Sbjct: 314 WEEISAGMRRLGYSRSSKRCKEKWENINK 342
Score = 38.1 bits (87), Expect(2) = 1e-31
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 376 CPYFHQLDALYRKKHGGSSSNLRSTTVEPETTSAQQQERPLAI 504
CPYFHQLDALYR K +SS+ + P + E + +
Sbjct: 361 CPYFHQLDALYRNKAALNSSSSSAAAAAPALPPPEHAEPAVTV 403
>gb|AER42647.1| GTL1 [Populus tremula x Populus alba]
Length = 795
Score = 118 bits (295), Expect(2) = 4e-31
Identities = 59/88 (67%), Positives = 66/88 (75%)
Frame = +3
Query: 3 VSSSELVLVPEPSHEIAVTGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPLW 182
+SS ++ VPE G G ASSRWPK EV ALI+LRSGLE++Y EAGPKGPLW
Sbjct: 494 ISSDIVMAVPEQQIAPLELGSGGSEPASSRWPKPEVLALIKLRSGLETRYQEAGPKGPLW 553
Query: 183 EEISSEMQRLGYNRSSKRCKEKWENINK 266
EEIS+ M RLGY RSSKRCKEKWENINK
Sbjct: 554 EEISAGMLRLGYKRSSKRCKEKWENINK 581
Score = 42.0 bits (97), Expect(2) = 4e-31
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = +1
Query: 376 CPYFHQLDALYRKKHGGSSSNLRSTTVEPETTSAQQQERP 495
CPYFH+LDALYRKK GSSS T T+ Q RP
Sbjct: 600 CPYFHELDALYRKKILGSSSGGAGNT---STSGFDSQNRP 636
Score = 76.3 bits (186), Expect = 3e-12
Identities = 32/70 (45%), Positives = 52/70 (74%)
Frame = +3
Query: 57 TGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPLWEEISSEMQRLGYNRSSKR 236
TGG + +RWP+ E AL+Q+RS +++ + +A KGPLWE++S ++ +GY RS+K+
Sbjct: 100 TGG---IASGNRWPRQETLALLQIRSEMDAAFRDATLKGPLWEDVSRKLAEMGYKRSAKK 156
Query: 237 CKEKWENINK 266
CKEK+EN++K
Sbjct: 157 CKEKFENVHK 166