BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004338
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloropl...   281   2e-73
ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloropl...   268   2e-69
ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloropl...   261   1e-67
ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloropl...   261   2e-67
ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|2...   259   5e-67

>ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
           gi|297736206|emb|CBI24844.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  281 bits (719), Expect = 2e-73
 Identities = 160/251 (63%), Positives = 187/251 (74%), Gaps = 6/251 (2%)
 Frame = -2

Query: 957 MVAISSLFTPNLVQSPTNLLKIPKSSRSIPALASFQISRPLDSCSFACRPRMRTMRILAA 778
           M AISSLF+  L+  PT  L +  S  SI  L  F     L+S +F      R + + A 
Sbjct: 1   MAAISSLFSQTLLHHPTKTLTL-HSKPSIQPLKPFHF---LNSVTFKAIKPKRPIAVSAV 56

Query: 777 STEAPPST-----RRLYVGNIPRTVTNEQLSKIFEEHGAVEKAEVMHDKYSGRSRRFAFV 613
           + EAP +T     RRLYVGNIPRT+ + +L++I EEHGAVEKAEVM+DKYSGRSRRFAFV
Sbjct: 57  TAEAPVATSDVAARRLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRFAFV 116

Query: 612 TMSTVEDANAAIEKLNETEIGGRKIKVNITEKPLATIDLSITQDDESKFIDSPYKVYVGN 433
           TM TVEDANAAIEKLN TEIGGR+IKVNITEKPL T+D+S+ Q +ES+FIDSP+KVYVGN
Sbjct: 117 TMKTVEDANAAIEKLNGTEIGGREIKVNITEKPLLTLDMSLLQAEESQFIDSPHKVYVGN 176

Query: 432 LAKTVTTELLTKFFSEK-GKVLSAKVSRVPXXXXXXXXXXXXXSAEEDVEAAISSCNNVL 256
           LA+TVTT+ LT+FFSEK GKVLSAKVSRVP             S+EEDVEAAISSCNN  
Sbjct: 177 LARTVTTDTLTQFFSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAISSCNNAF 236

Query: 255 LEGQRIRVNKA 223
           L+GQRIRVNKA
Sbjct: 237 LDGQRIRVNKA 247


>ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
           sativus] gi|449489082|ref|XP_004158209.1| PREDICTED: 30S
           ribosomal protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 251

 Score =  268 bits (684), Expect = 2e-69
 Identities = 151/257 (58%), Positives = 178/257 (69%), Gaps = 12/257 (4%)
 Frame = -2

Query: 957 MVAISSLFTPNLVQSPTNLLKIPKSSRSIPALASFQISRPLDS---------CSFACRPR 805
           M +ISS+ TP      TNL+   K    IP   S Q  RP+              A +P 
Sbjct: 1   MASISSILTP------TNLIHSSKKPTDIPQTLSSQFLRPISFHPPHILLRISPVAAKPP 54

Query: 804 MRTMRILAASTEAPPST--RRLYVGNIPRTVTNEQLSKIFEEHGAVEKAEVMHDKYSGRS 631
            R   +   +T+   S   R+LY+GNIPR V NE+L++I +EHGAVEKAEVM+DKYSGRS
Sbjct: 55  TRLFAVAEVATQGASSVAERKLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRS 114

Query: 630 RRFAFVTMSTVEDANAAIEKLNETEIGGRKIKVNITEKPLA-TIDLSITQDDESKFIDSP 454
           RRFAFVTM TVEDANAAIEKLNETE+GGRKIKVNITEKP+  T+D+S  Q +ES+FIDSP
Sbjct: 115 RRFAFVTMKTVEDANAAIEKLNETEVGGRKIKVNITEKPVVNTVDMSFLQAEESQFIDSP 174

Query: 453 YKVYVGNLAKTVTTELLTKFFSEKGKVLSAKVSRVPXXXXXXXXXXXXXSAEEDVEAAIS 274
           YKVYVGN++ TV+TE L  FFSEKGKVLSAKVSRVP             S+EE+V+AAIS
Sbjct: 175 YKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVDAAIS 234

Query: 273 SCNNVLLEGQRIRVNKA 223
           S NN LLEGQ IRVNKA
Sbjct: 235 SFNNALLEGQPIRVNKA 251


>ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
           max]
          Length = 246

 Score =  261 bits (668), Expect = 1e-67
 Identities = 146/231 (63%), Positives = 168/231 (72%), Gaps = 11/231 (4%)
 Frame = -2

Query: 882 SRSIPALASFQISRPLDSCSFACRPRMRTMR-----------ILAASTEAPPSTRRLYVG 736
           S + P+ +S  +  P+   +   RP + T R              A+T    S RRLYVG
Sbjct: 16  SLTTPSSSSTHVLFPMRLSTTHLRPLLLTTRHGFGRPPFAAVAEQAATATEASARRLYVG 75

Query: 735 NIPRTVTNEQLSKIFEEHGAVEKAEVMHDKYSGRSRRFAFVTMSTVEDANAAIEKLNETE 556
           NIPRTVTNE+L+KI +EHGAVEKAEVM+DKYSGRSRRFAFVTM TVEDA A IEKLN TE
Sbjct: 76  NIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEKLNGTE 135

Query: 555 IGGRKIKVNITEKPLATIDLSITQDDESKFIDSPYKVYVGNLAKTVTTELLTKFFSEKGK 376
           IGGR++KVN+TEKPL+T DL + Q +ES+FIDSP+KVYVGNLAKTVTT+ L  FFSEKGK
Sbjct: 136 IGGREVKVNVTEKPLSTPDLPLLQAEESEFIDSPHKVYVGNLAKTVTTDTLKNFFSEKGK 195

Query: 375 VLSAKVSRVPXXXXXXXXXXXXXSAEEDVEAAISSCNNVLLEGQRIRVNKA 223
           VLSAKVSRVP             S+EEDVEAAISS NN LLEGQ IRVNKA
Sbjct: 196 VLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSLLEGQTIRVNKA 246


>ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
           max]
          Length = 246

 Score =  261 bits (666), Expect = 2e-67
 Identities = 139/197 (70%), Positives = 157/197 (79%)
 Frame = -2

Query: 813 RPRMRTMRILAASTEAPPSTRRLYVGNIPRTVTNEQLSKIFEEHGAVEKAEVMHDKYSGR 634
           RP        A +TEA  + RRLYVGNIPRTVTN++L+KI +EHGAVEKAEVM+DKYSGR
Sbjct: 52  RPFAAVAEQAATATEA--AARRLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGR 109

Query: 633 SRRFAFVTMSTVEDANAAIEKLNETEIGGRKIKVNITEKPLATIDLSITQDDESKFIDSP 454
           SRRFAFVTM TVEDA A IEKLN TE+GGR+IKVN+TEKPL+T+DL + Q +ES+FIDSP
Sbjct: 110 SRRFAFVTMKTVEDATAVIEKLNGTELGGREIKVNVTEKPLSTLDLPLLQAEESEFIDSP 169

Query: 453 YKVYVGNLAKTVTTELLTKFFSEKGKVLSAKVSRVPXXXXXXXXXXXXXSAEEDVEAAIS 274
           +KVYVGNLAKTVTT+ L  FFSEKGKVLSAKVSRVP              +EEDVEAAIS
Sbjct: 170 HKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEEDVEAAIS 229

Query: 273 SCNNVLLEGQRIRVNKA 223
           S NN LLEGQ IRVNKA
Sbjct: 230 SFNNSLLEGQTIRVNKA 246


>ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|222850427|gb|EEE87974.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  259 bits (663), Expect = 5e-67
 Identities = 156/264 (59%), Positives = 178/264 (67%), Gaps = 19/264 (7%)
 Frame = -2

Query: 957 MVAISSLFTPNLVQSPTNLLKIPKSSRSIPALASFQISRPLDSCSFACRPRMRTM----- 793
           M  ISSL TP     PT+       ++S P   SFQI +P +   F   P+   +     
Sbjct: 1   MATISSLTTP----LPTSTKLALSRNQSKP---SFQILKPANP--FNHFPKFTHLHKILN 51

Query: 792 -----RILAASTEAPPST---------RRLYVGNIPRTVTNEQLSKIFEEHGAVEKAEVM 655
                R+ A + E  P+          RRLYVGNIPRT+TNE+L+KI EEHGAVEKAEVM
Sbjct: 52  TKAPQRLFAVAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVM 111

Query: 654 HDKYSGRSRRFAFVTMSTVEDANAAIEKLNETEIGGRKIKVNITEKPLATIDLSITQDDE 475
           +DKYSGRSRRFAFVTM T EDANAAIEKLN TEIGGR+IKVNITEKPL ++DL   Q DE
Sbjct: 112 YDKYSGRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDE 171

Query: 474 SKFIDSPYKVYVGNLAKTVTTELLTKFFSEKGKVLSAKVSRVPXXXXXXXXXXXXXSAEE 295
           S+F+DSPYKVYVGNLAKTV T+ L  FFS+KG VLSAKVSRVP             S+EE
Sbjct: 172 SQFVDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEE 231

Query: 294 DVEAAISSCNNVLLEGQRIRVNKA 223
           DVE AISS NN LLEGQ IRVNKA
Sbjct: 232 DVEVAISSFNNSLLEGQPIRVNKA 255