BLASTX nr result

ID: Dioscorea21_contig00004330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004330
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP54624.2| expressed protein [Oryza sativa Japonica Group]        115   6e-24
gb|AAK39576.1|AC025296_11 putative transcription factor [Oryza s...   115   6e-24
gb|EEC67312.1| hypothetical protein OsI_34323 [Oryza sativa Indi...   115   6e-24
gb|AER42647.1| GTL1 [Populus tremula x Populus alba]                  113   2e-23
gb|EEE51268.1| hypothetical protein OsJ_32161 [Oryza sativa Japo...   108   4e-22

>gb|AAP54624.2| expressed protein [Oryza sativa Japonica Group]
          Length = 596

 Score =  115 bits (287), Expect = 6e-24
 Identities = 69/178 (38%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
 Frame = -3

Query: 554 SSSELVLVPEPSHEMAV--TGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPL 381
           SS ++V+    +H+     +GGG    +SSRWPKAEVHALIQLRS L+++Y EAGPKGPL
Sbjct: 254 SSMDIVMTAAEAHDAGYDGSGGGGGQPSSSRWPKAEVHALIQLRSNLDNRYQEAGPKGPL 313

Query: 380 WEEISLEMQRLGYNRSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           WEEIS  M+RLGY+RSSK                                          
Sbjct: 314 WEEISAGMRRLGYSRSSK-------------------------RCKEKWENINKYFKKVK 348

Query: 200 XXXXXXXXXAKTCPYFHQLDALYRKKHGGSSSNLRSTTVEPETTSTQQQERPLAIMAP 27
                    +KTCPYFHQLDALYR K   +SS+  +    P     +  E  + + AP
Sbjct: 349 ESNKKRPEDSKTCPYFHQLDALYRNKAALNSSSSSAAAAAPALPPPEHAEPAVTVAAP 406


>gb|AAK39576.1|AC025296_11 putative transcription factor [Oryza sativa Japonica Group]
           gi|110289412|gb|ABB47886.2| expressed protein [Oryza
           sativa Japonica Group]
          Length = 822

 Score =  115 bits (287), Expect = 6e-24
 Identities = 69/178 (38%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
 Frame = -3

Query: 554 SSSELVLVPEPSHEMAV--TGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPL 381
           SS ++V+    +H+     +GGG    +SSRWPKAEVHALIQLRS L+++Y EAGPKGPL
Sbjct: 480 SSMDIVMTAAEAHDAGYDGSGGGGGQPSSSRWPKAEVHALIQLRSNLDNRYQEAGPKGPL 539

Query: 380 WEEISLEMQRLGYNRSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           WEEIS  M+RLGY+RSSK                                          
Sbjct: 540 WEEISAGMRRLGYSRSSK-------------------------RCKEKWENINKYFKKVK 574

Query: 200 XXXXXXXXXAKTCPYFHQLDALYRKKHGGSSSNLRSTTVEPETTSTQQQERPLAIMAP 27
                    +KTCPYFHQLDALYR K   +SS+  +    P     +  E  + + AP
Sbjct: 575 ESNKKRPEDSKTCPYFHQLDALYRNKAALNSSSSSAAAAAPALPPPEHAEPAVTVAAP 632



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 16/74 (21%)
 Frame = -3

Query: 500 GGGFETVA----------------SSRWPKAEVHALIQLRSGLESKYTEAGPKGPLWEEI 369
           GGGF+  A                 +RWP+ E  AL+++RS +++ + +A  KGPLWEE+
Sbjct: 171 GGGFDAEALAAAAVGEEGASGGAGGNRWPRQETLALLKIRSDMDAAFRDATLKGPLWEEV 230

Query: 368 SLEMQRLGYNRSSK 327
           S ++   GY RS+K
Sbjct: 231 SRKLAEEGYRRSAK 244


>gb|EEC67312.1| hypothetical protein OsI_34323 [Oryza sativa Indica Group]
          Length = 692

 Score =  115 bits (287), Expect = 6e-24
 Identities = 69/178 (38%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
 Frame = -3

Query: 554 SSSELVLVPEPSHEMAV--TGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPL 381
           SS ++V+    +H+     +GGG    +SSRWPKAEVHALIQLRS L+++Y EAGPKGPL
Sbjct: 350 SSMDIVMTAAEAHDAGYDGSGGGGGQPSSSRWPKAEVHALIQLRSNLDNRYQEAGPKGPL 409

Query: 380 WEEISLEMQRLGYNRSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           WEEIS  M+RLGY+RSSK                                          
Sbjct: 410 WEEISAGMRRLGYSRSSK-------------------------RCKEKWENINKYFKKVK 444

Query: 200 XXXXXXXXXAKTCPYFHQLDALYRKKHGGSSSNLRSTTVEPETTSTQQQERPLAIMAP 27
                    +KTCPYFHQLDALYR K   +SS+  +    P     +  E  + + AP
Sbjct: 445 ESNKKRPEDSKTCPYFHQLDALYRNKAALNSSSSAAAAAAPALPPPEHAEPAVTVAAP 502



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 16/74 (21%)
 Frame = -3

Query: 500 GGGFETVA----------------SSRWPKAEVHALIQLRSGLESKYTEAGPKGPLWEEI 369
           GGGF+  A                 +RWP+ E  AL+++RS +++ + +A  KGPLWEE+
Sbjct: 69  GGGFDAEALAAAAVGEEGASGGAVGNRWPRQETLALLKIRSDMDAAFRDATLKGPLWEEV 128

Query: 368 SLEMQRLGYNRSSK 327
           S ++   GY RS+K
Sbjct: 129 SRKLAEEGYRRSAK 142


>gb|AER42647.1| GTL1 [Populus tremula x Populus alba]
          Length = 795

 Score =  113 bits (282), Expect = 2e-23
 Identities = 76/191 (39%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
 Frame = -3

Query: 557 VSSSELVLVPEPSHEMAVTGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPLW 378
           +SS  ++ VPE        G G    ASSRWPK EV ALI+LRSGLE++Y EAGPKGPLW
Sbjct: 494 ISSDIVMAVPEQQIAPLELGSGGSEPASSRWPKPEVLALIKLRSGLETRYQEAGPKGPLW 553

Query: 377 EEISLEMQRLGYNRSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           EEIS  M RLGY RSSK                                           
Sbjct: 554 EEISAGMLRLGYKRSSK-------------------------RCKEKWENINKYFKKVKE 588

Query: 197 XXXXXXXXAKTCPYFHQLDALYRKKHGGSSS----NLRSTTVEPETTSTQQQERPLAIM- 33
                   AKTCPYFH+LDALYRKK  GSSS    N  ++  + +    +QQ +P   + 
Sbjct: 589 SNKKRPEDAKTCPYFHELDALYRKKILGSSSGGAGNTSTSGFDSQNRPQKQQHQPQESLE 648

Query: 32  ---APPPVATA 9
               PPP+  A
Sbjct: 649 LDPMPPPMQQA 659



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/59 (42%), Positives = 41/59 (69%)
 Frame = -3

Query: 503 TGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPLWEEISLEMQRLGYNRSSK 327
           TGG     + +RWP+ E  AL+Q+RS +++ + +A  KGPLWE++S ++  +GY RS+K
Sbjct: 100 TGG---IASGNRWPRQETLALLQIRSEMDAAFRDATLKGPLWEDVSRKLAEMGYKRSAK 155


>gb|EEE51268.1| hypothetical protein OsJ_32161 [Oryza sativa Japonica Group]
          Length = 746

 Score =  108 bits (271), Expect = 4e-22
 Identities = 65/153 (42%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
 Frame = -3

Query: 554 SSSELVLVPEPSHEMAV--TGGGFETVASSRWPKAEVHALIQLRSGLESKYTEAGPKGPL 381
           SS ++V+    +H+     +GGG    +SSRWPKAEVHALIQLRS L+++Y EAGPKGPL
Sbjct: 405 SSMDIVMTAAEAHDAGYDGSGGGGGQPSSSRWPKAEVHALIQLRSNLDNRYQEAGPKGPL 464

Query: 380 WEEISLEMQRLGYNRSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           WEEIS  M+RLGY+RSSK                                          
Sbjct: 465 WEEISAGMRRLGYSRSSK-------------------------RCKEKWENINKYFKKVK 499

Query: 200 XXXXXXXXXAKTCPYFHQLDALYRKKHGGSSSN 102
                    +KTCPYFHQLDALYR K   +SS+
Sbjct: 500 ESNKKRPEDSKTCPYFHQLDALYRNKAALNSSS 532



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 16/74 (21%)
 Frame = -3

Query: 500 GGGFETVA----------------SSRWPKAEVHALIQLRSGLESKYTEAGPKGPLWEEI 369
           GGGF+  A                 +RWP+ E  AL+++RS +++ + +A  KGPLWEE+
Sbjct: 31  GGGFDAEALAAAAVGEEGASGGAGGNRWPRQETLALLKIRSDMDAAFRDATLKGPLWEEV 90

Query: 368 SLEMQRLGYNRSSK 327
           S ++   GY RS+K
Sbjct: 91  SRKLAEEGYRRSAK 104


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