BLASTX nr result

ID: Dioscorea21_contig00004321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004321
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564812.1| PREDICTED: signal recognition particle 72 kD...    99   5e-19
tpg|DAA56439.1| TPA: hypothetical protein ZEAMMB73_436994 [Zea m...    98   8e-19
ref|XP_002456764.1| hypothetical protein SORBIDRAFT_03g042250 [S...    98   8e-19
ref|NP_001169083.1| uncharacterized protein LOC100382925 [Zea ma...    98   8e-19
ref|XP_002514972.1| Signal recognition particle subunit srp72, p...    98   8e-19

>ref|XP_003564812.1| PREDICTED: signal recognition particle 72 kDa protein-like
           [Brachypodium distachyon]
          Length = 665

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/98 (55%), Positives = 60/98 (61%)
 Frame = +3

Query: 6   GLKGINVESLEKTSGAKHVEGAHAGKTEVSEEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
           GLKGIN ESLEKTSGA+HV+   A K EV EEV                           
Sbjct: 531 GLKGINAESLEKTSGARHVD--QAMKVEVPEEVKKQKAKKRKRKPKYPKSFDPANPGPPP 588

Query: 186 XXERWLPKRERSSYRPRRKDKRGQVRGSQGAVAKEKHE 299
             ERWLPKRERSSYRP+RKDKR QVRG+QGAV +EKH+
Sbjct: 589 DPERWLPKRERSSYRPKRKDKRAQVRGAQGAVTREKHD 626


>tpg|DAA56439.1| TPA: hypothetical protein ZEAMMB73_436994 [Zea mays]
          Length = 660

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/95 (53%), Positives = 59/95 (62%)
 Frame = +3

Query: 6   GLKGINVESLEKTSGAKHVEGAHAGKTEVSEEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
           GLKG+NVESLEKTSGA+HVEG    K +V EEV                           
Sbjct: 524 GLKGVNVESLEKTSGARHVEGPQDMKVDVPEEVKKQKAKKRKRKPRYPKGFDPANPGPPP 583

Query: 186 XXERWLPKRERSSYRPRRKDKRGQVRGSQGAVAKE 290
             ERWLP+RERSSYRP+RKDKR QVRG+QGAV++E
Sbjct: 584 DPERWLPRRERSSYRPKRKDKRAQVRGAQGAVSRE 618


>ref|XP_002456764.1| hypothetical protein SORBIDRAFT_03g042250 [Sorghum bicolor]
           gi|241928739|gb|EES01884.1| hypothetical protein
           SORBIDRAFT_03g042250 [Sorghum bicolor]
          Length = 667

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/95 (53%), Positives = 59/95 (62%)
 Frame = +3

Query: 6   GLKGINVESLEKTSGAKHVEGAHAGKTEVSEEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
           GLKG+NVESLEKTSGA+HVEG    K +V EEV                           
Sbjct: 531 GLKGVNVESLEKTSGARHVEGPQDMKVDVPEEVKKQKAKKRKRKPRYPKGFDPANPGPPP 590

Query: 186 XXERWLPKRERSSYRPRRKDKRGQVRGSQGAVAKE 290
             ERWLP+RERSSYRP+RKDKR QVRG+QGAV++E
Sbjct: 591 DPERWLPRRERSSYRPKRKDKRAQVRGAQGAVSRE 625


>ref|NP_001169083.1| uncharacterized protein LOC100382925 [Zea mays]
           gi|223974839|gb|ACN31607.1| unknown [Zea mays]
          Length = 666

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/95 (53%), Positives = 59/95 (62%)
 Frame = +3

Query: 6   GLKGINVESLEKTSGAKHVEGAHAGKTEVSEEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
           GLKG+NVESLEKTSGA+HVEG    K +V EEV                           
Sbjct: 530 GLKGVNVESLEKTSGARHVEGPQDMKVDVPEEVKKQKAKKRKRKPRYPKGFDPANPGPPP 589

Query: 186 XXERWLPKRERSSYRPRRKDKRGQVRGSQGAVAKE 290
             ERWLP+RERSSYRP+RKDKR QVRG+QGAV++E
Sbjct: 590 DPERWLPRRERSSYRPKRKDKRAQVRGAQGAVSRE 624


>ref|XP_002514972.1| Signal recognition particle subunit srp72, putative [Ricinus
           communis] gi|223546023|gb|EEF47526.1| Signal recognition
           particle subunit srp72, putative [Ricinus communis]
          Length = 664

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 56/100 (56%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
 Frame = +3

Query: 6   GLKGINVESLEKTSGAKHVEGAHAGKTEVSEE-VXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           GLKGI+V+SLEKTSGAKHVEG+H    EV EE                            
Sbjct: 524 GLKGIDVDSLEKTSGAKHVEGSHVSVAEVHEEGKKEKPKKKRKRKPRYPKGFDPANPGPP 583

Query: 183 XXXERWLPKRERSSYRPRRKDKR-GQVRGSQGAVAKEKHE 299
              ERWLPKRERSSYRP+RKDKR  QVRGSQGAV +EKHE
Sbjct: 584 PDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKHE 623


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