BLASTX nr result
ID: Dioscorea21_contig00004321
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00004321 (438 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003564812.1| PREDICTED: signal recognition particle 72 kD... 99 5e-19 tpg|DAA56439.1| TPA: hypothetical protein ZEAMMB73_436994 [Zea m... 98 8e-19 ref|XP_002456764.1| hypothetical protein SORBIDRAFT_03g042250 [S... 98 8e-19 ref|NP_001169083.1| uncharacterized protein LOC100382925 [Zea ma... 98 8e-19 ref|XP_002514972.1| Signal recognition particle subunit srp72, p... 98 8e-19 >ref|XP_003564812.1| PREDICTED: signal recognition particle 72 kDa protein-like [Brachypodium distachyon] Length = 665 Score = 98.6 bits (244), Expect = 5e-19 Identities = 54/98 (55%), Positives = 60/98 (61%) Frame = +3 Query: 6 GLKGINVESLEKTSGAKHVEGAHAGKTEVSEEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 185 GLKGIN ESLEKTSGA+HV+ A K EV EEV Sbjct: 531 GLKGINAESLEKTSGARHVD--QAMKVEVPEEVKKQKAKKRKRKPKYPKSFDPANPGPPP 588 Query: 186 XXERWLPKRERSSYRPRRKDKRGQVRGSQGAVAKEKHE 299 ERWLPKRERSSYRP+RKDKR QVRG+QGAV +EKH+ Sbjct: 589 DPERWLPKRERSSYRPKRKDKRAQVRGAQGAVTREKHD 626 >tpg|DAA56439.1| TPA: hypothetical protein ZEAMMB73_436994 [Zea mays] Length = 660 Score = 97.8 bits (242), Expect = 8e-19 Identities = 51/95 (53%), Positives = 59/95 (62%) Frame = +3 Query: 6 GLKGINVESLEKTSGAKHVEGAHAGKTEVSEEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 185 GLKG+NVESLEKTSGA+HVEG K +V EEV Sbjct: 524 GLKGVNVESLEKTSGARHVEGPQDMKVDVPEEVKKQKAKKRKRKPRYPKGFDPANPGPPP 583 Query: 186 XXERWLPKRERSSYRPRRKDKRGQVRGSQGAVAKE 290 ERWLP+RERSSYRP+RKDKR QVRG+QGAV++E Sbjct: 584 DPERWLPRRERSSYRPKRKDKRAQVRGAQGAVSRE 618 >ref|XP_002456764.1| hypothetical protein SORBIDRAFT_03g042250 [Sorghum bicolor] gi|241928739|gb|EES01884.1| hypothetical protein SORBIDRAFT_03g042250 [Sorghum bicolor] Length = 667 Score = 97.8 bits (242), Expect = 8e-19 Identities = 51/95 (53%), Positives = 59/95 (62%) Frame = +3 Query: 6 GLKGINVESLEKTSGAKHVEGAHAGKTEVSEEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 185 GLKG+NVESLEKTSGA+HVEG K +V EEV Sbjct: 531 GLKGVNVESLEKTSGARHVEGPQDMKVDVPEEVKKQKAKKRKRKPRYPKGFDPANPGPPP 590 Query: 186 XXERWLPKRERSSYRPRRKDKRGQVRGSQGAVAKE 290 ERWLP+RERSSYRP+RKDKR QVRG+QGAV++E Sbjct: 591 DPERWLPRRERSSYRPKRKDKRAQVRGAQGAVSRE 625 >ref|NP_001169083.1| uncharacterized protein LOC100382925 [Zea mays] gi|223974839|gb|ACN31607.1| unknown [Zea mays] Length = 666 Score = 97.8 bits (242), Expect = 8e-19 Identities = 51/95 (53%), Positives = 59/95 (62%) Frame = +3 Query: 6 GLKGINVESLEKTSGAKHVEGAHAGKTEVSEEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 185 GLKG+NVESLEKTSGA+HVEG K +V EEV Sbjct: 530 GLKGVNVESLEKTSGARHVEGPQDMKVDVPEEVKKQKAKKRKRKPRYPKGFDPANPGPPP 589 Query: 186 XXERWLPKRERSSYRPRRKDKRGQVRGSQGAVAKE 290 ERWLP+RERSSYRP+RKDKR QVRG+QGAV++E Sbjct: 590 DPERWLPRRERSSYRPKRKDKRAQVRGAQGAVSRE 624 >ref|XP_002514972.1| Signal recognition particle subunit srp72, putative [Ricinus communis] gi|223546023|gb|EEF47526.1| Signal recognition particle subunit srp72, putative [Ricinus communis] Length = 664 Score = 97.8 bits (242), Expect = 8e-19 Identities = 56/100 (56%), Positives = 61/100 (61%), Gaps = 2/100 (2%) Frame = +3 Query: 6 GLKGINVESLEKTSGAKHVEGAHAGKTEVSEE-VXXXXXXXXXXXXXXXXXXXXXXXXXX 182 GLKGI+V+SLEKTSGAKHVEG+H EV EE Sbjct: 524 GLKGIDVDSLEKTSGAKHVEGSHVSVAEVHEEGKKEKPKKKRKRKPRYPKGFDPANPGPP 583 Query: 183 XXXERWLPKRERSSYRPRRKDKR-GQVRGSQGAVAKEKHE 299 ERWLPKRERSSYRP+RKDKR QVRGSQGAV +EKHE Sbjct: 584 PDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKHE 623