BLASTX nr result

ID: Dioscorea21_contig00004320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004320
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43189.1| unknown [Lotus japonicus]                              456   e-126
gb|ABF69972.1| aminomethyltransferase, mitochondrial (glycine cl...   454   e-125
sp|P54260.1|GCST_SOLTU RecName: Full=Aminomethyltransferase, mit...   453   e-125
ref|XP_003546157.1| PREDICTED: aminomethyltransferase, mitochond...   452   e-125
ref|XP_004145120.1| PREDICTED: aminomethyltransferase, mitochond...   452   e-125

>gb|AFK43189.1| unknown [Lotus japonicus]
          Length = 407

 Score =  456 bits (1172), Expect = e-126
 Identities = 218/252 (86%), Positives = 231/252 (91%)
 Frame = +2

Query: 2   LAHIGSHMEAFKAKGGDVNWHIHDERSLLALQGPLSAPVLQHLTKDDLSKFYFGEFRKLD 181
           LAHI  HM+AFKAKGGDV+WHIHDERSLLALQGPL+ PVLQHLTKDDLSKFYFGEFR LD
Sbjct: 155 LAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAGPVLQHLTKDDLSKFYFGEFRVLD 214

Query: 182 INGSHCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSLRLEAAL 361
           INGS CFLTRTGYTGEDGFEISVPSENA+DL KAILEKSEGK+RLTGLGARDSLRLEA L
Sbjct: 215 INGSQCFLTRTGYTGEDGFEISVPSENALDLTKAILEKSEGKIRLTGLGARDSLRLEAGL 274

Query: 362 CLYGNDMEQHVTPVEAGLTWAIGKRRRVEGGFLGADVILKQLEEGPAIRRAGFFSSGPPP 541
           CLYGNDMEQH+TPVEAGLTWAIGKRRR EGGFLGA+VILKQL EGP IRR GFFSSGPPP
Sbjct: 275 CLYGNDMEQHITPVEAGLTWAIGKRRRAEGGFLGAEVILKQLAEGPKIRRVGFFSSGPPP 334

Query: 542 RGHSEILSSSGEKIGEVTSGGFSPCLKKNIAMGYVKTGYHKPGTEVKIVIRGKSNDGAVT 721
           R HSE+    G  IGEVTSGGFSPCLKKNIAMGYVK+G HK GT+VKI+IRGK+N+G VT
Sbjct: 335 RSHSEVQDEGGNNIGEVTSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIIIRGKANEGVVT 394

Query: 722 KMPFVPTKYYKP 757
           KMPFVPTKYYKP
Sbjct: 395 KMPFVPTKYYKP 406


>gb|ABF69972.1| aminomethyltransferase, mitochondrial (glycine cleavage system T
           protein), putative [Musa acuminata]
          Length = 424

 Score =  454 bits (1167), Expect = e-125
 Identities = 224/264 (84%), Positives = 239/264 (90%), Gaps = 12/264 (4%)
 Frame = +2

Query: 2   LAHIGSHMEAFKAKGGDVNWHIHDERSLLALQGPLSAPVLQHLTKDDLSKFYFGEFRKLD 181
           LAHIG+H+EAFKAKGGDV WHIHDERSLLALQGP++APVLQ L KDDLSK YFGEFR L+
Sbjct: 160 LAHIGAHLEAFKAKGGDVEWHIHDERSLLALQGPMAAPVLQLLMKDDLSKIYFGEFRTLN 219

Query: 182 INGSHCFLTRTG-----------YTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLG 328
           ING+HCFLTRTG           YTGEDGFEISVPSE+AVDL KAILEKSEGKVRLTGLG
Sbjct: 220 INGAHCFLTRTGNPVSNLPEIISYTGEDGFEISVPSEHAVDLTKAILEKSEGKVRLTGLG 279

Query: 329 ARDSLRLEAALCLYGNDMEQHVTPVEAGLTWAIGKRRRVEGGFLGADVILKQLEEGPAIR 508
           ARDSLRLEA LCLYGNDMEQH TPVEAGL+WAIGKRRR EGGFLGA+VILKQL+EGP +R
Sbjct: 280 ARDSLRLEAGLCLYGNDMEQHTTPVEAGLSWAIGKRRRAEGGFLGAEVILKQLQEGPPVR 339

Query: 509 RAGFFSSGPPPRGHSEIL-SSSGEKIGEVTSGGFSPCLKKNIAMGYVKTGYHKPGTEVKI 685
           R GFFS+GPPPR HSEIL SSSGEKIGEVTSGGFSPCLKKNIAMGYVK+G+HKPGTEVKI
Sbjct: 340 RVGFFSNGPPPRSHSEILSSSSGEKIGEVTSGGFSPCLKKNIAMGYVKSGFHKPGTEVKI 399

Query: 686 VIRGKSNDGAVTKMPFVPTKYYKP 757
           VIRGK+NDG VTKMPFVPTKYYKP
Sbjct: 400 VIRGKANDGIVTKMPFVPTKYYKP 423


>sp|P54260.1|GCST_SOLTU RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
           Full=Glycine cleavage system T protein; Short=GCVT;
           Flags: Precursor gi|438254|emb|CAA81081.1| T-protein
           [Solanum tuberosum]
          Length = 406

 Score =  453 bits (1165), Expect = e-125
 Identities = 218/252 (86%), Positives = 233/252 (92%)
 Frame = +2

Query: 2   LAHIGSHMEAFKAKGGDVNWHIHDERSLLALQGPLSAPVLQHLTKDDLSKFYFGEFRKLD 181
           LAHI  HM++FK+KGGDV+WHIHDERSLLALQGPL+APVLQ+LTKDDLSK YFGEFR LD
Sbjct: 155 LAHIEEHMKSFKSKGGDVSWHIHDERSLLALQGPLAAPVLQYLTKDDLSKMYFGEFRVLD 214

Query: 182 INGSHCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSLRLEAAL 361
           ING+ CFLTRTGYTGEDGFEISVPSENA+DLAKA+LEKSEGK+RLTGLGARDSLRLEA L
Sbjct: 215 INGAPCFLTRTGYTGEDGFEISVPSENALDLAKALLEKSEGKIRLTGLGARDSLRLEAGL 274

Query: 362 CLYGNDMEQHVTPVEAGLTWAIGKRRRVEGGFLGADVILKQLEEGPAIRRAGFFSSGPPP 541
           CLYGNDMEQH TPVEAGLTWAIGKRRR EGGFLGA+VILKQ+EEGP IRR GFFSSGPPP
Sbjct: 275 CLYGNDMEQHTTPVEAGLTWAIGKRRRAEGGFLGAEVILKQIEEGPKIRRVGFFSSGPPP 334

Query: 542 RGHSEILSSSGEKIGEVTSGGFSPCLKKNIAMGYVKTGYHKPGTEVKIVIRGKSNDGAVT 721
           R HSEI  S+G+ IGE+TSGGFSPCLKKNIAMGYVKTG HK GT VKIVIRGKS DG VT
Sbjct: 335 RSHSEIQDSNGQNIGEITSGGFSPCLKKNIAMGYVKTGNHKAGTNVKIVIRGKSYDGVVT 394

Query: 722 KMPFVPTKYYKP 757
           KMPFVPTKYYKP
Sbjct: 395 KMPFVPTKYYKP 406


>ref|XP_003546157.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Glycine max]
          Length = 407

 Score =  452 bits (1163), Expect = e-125
 Identities = 216/252 (85%), Positives = 232/252 (92%)
 Frame = +2

Query: 2   LAHIGSHMEAFKAKGGDVNWHIHDERSLLALQGPLSAPVLQHLTKDDLSKFYFGEFRKLD 181
           LAHI  HM+AFKAKGGDV+WHIHDERSLLALQGPL+APVLQHLTK+DLSK YFGEFR LD
Sbjct: 155 LAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDLSKMYFGEFRVLD 214

Query: 182 INGSHCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSLRLEAAL 361
           ING  CFLTRTGYTGEDGFEIS+PSE+AVDLAKAILEKSEGK+RLTGLGARDSLRLEA L
Sbjct: 215 INGVQCFLTRTGYTGEDGFEISIPSESAVDLAKAILEKSEGKIRLTGLGARDSLRLEAGL 274

Query: 362 CLYGNDMEQHVTPVEAGLTWAIGKRRRVEGGFLGADVILKQLEEGPAIRRAGFFSSGPPP 541
           CLYGND+EQH+TP+EAGLTWAIGKRRR EGGFLGADVILKQLEEGP IRR GFFSSGPPP
Sbjct: 275 CLYGNDLEQHITPIEAGLTWAIGKRRRAEGGFLGADVILKQLEEGPKIRRVGFFSSGPPP 334

Query: 542 RGHSEILSSSGEKIGEVTSGGFSPCLKKNIAMGYVKTGYHKPGTEVKIVIRGKSNDGAVT 721
           R HSEI    G  IGEV+SGGFSPCLKKNIA+GYVK+G HK GT+VKI+IRGKSN+G VT
Sbjct: 335 RSHSEIQDEGGNNIGEVSSGGFSPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKSNEGVVT 394

Query: 722 KMPFVPTKYYKP 757
           KMPFVPTKYYKP
Sbjct: 395 KMPFVPTKYYKP 406


>ref|XP_004145120.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Cucumis
           sativus] gi|449472329|ref|XP_004153559.1| PREDICTED:
           aminomethyltransferase, mitochondrial-like [Cucumis
           sativus]
          Length = 407

 Score =  452 bits (1162), Expect = e-125
 Identities = 219/252 (86%), Positives = 233/252 (92%)
 Frame = +2

Query: 2   LAHIGSHMEAFKAKGGDVNWHIHDERSLLALQGPLSAPVLQHLTKDDLSKFYFGEFRKLD 181
           LAHI  HM+AFKAKGGDV+WHIHDERSLLALQGPL+APVLQ+LTKDDLSK YFGEFR LD
Sbjct: 155 LAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQYLTKDDLSKLYFGEFRILD 214

Query: 182 INGSHCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSLRLEAAL 361
           ING+ CFLTRTGYTGEDGFEISVPSENA+DLAKAILEKSEGKVRLTGLGARDSLRLEA L
Sbjct: 215 INGARCFLTRTGYTGEDGFEISVPSENALDLAKAILEKSEGKVRLTGLGARDSLRLEAGL 274

Query: 362 CLYGNDMEQHVTPVEAGLTWAIGKRRRVEGGFLGADVILKQLEEGPAIRRAGFFSSGPPP 541
           CLYGNDMEQH TPVEAGLTWAIGKRRR EGGFLGA+VILKQLEEGPAIRR GFFSSGPP 
Sbjct: 275 CLYGNDMEQHTTPVEAGLTWAIGKRRRAEGGFLGAEVILKQLEEGPAIRRVGFFSSGPPA 334

Query: 542 RGHSEILSSSGEKIGEVTSGGFSPCLKKNIAMGYVKTGYHKPGTEVKIVIRGKSNDGAVT 721
           R HSEI +  G+ IGEVTSGGFSPCLKKNIAMGYVK+G HK GT+VKI++RGK+ DG VT
Sbjct: 335 RSHSEIQNEDGKNIGEVTSGGFSPCLKKNIAMGYVKSGTHKAGTKVKIIVRGKAYDGVVT 394

Query: 722 KMPFVPTKYYKP 757
           KMPFVPTKYYKP
Sbjct: 395 KMPFVPTKYYKP 406


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