BLASTX nr result

ID: Dioscorea21_contig00004317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004317
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056162.1| Os05g0536200 [Oryza sativa Japonica Group] g...    71   1e-10
ref|NP_001104949.1| voltage-dependent anion channel protein2 [Ze...    70   1e-10
ref|XP_002440144.1| hypothetical protein SORBIDRAFT_09g026790 [S...    70   1e-10
ref|XP_004146750.1| PREDICTED: mitochondrial outer membrane prot...    70   2e-10
gb|AAA96275.1| voltage-dependent anion channel protein [Spinacia...    70   2e-10

>ref|NP_001056162.1| Os05g0536200 [Oryza sativa Japonica Group]
           gi|75126768|sp|Q6L5I5.1|VDAC2_ORYSJ RecName:
           Full=Mitochondrial outer membrane protein porin 2;
           AltName: Full=Voltage-dependent anion-selective channel
           protein 2; Short=OsVDAC2 gi|18076158|emb|CAC80850.1|
           voltage-dependent anion channel [Oryza sativa Japonica
           Group] gi|47900420|gb|AAT39214.1| voltage-dependent
           anion-selective channel (VDAC) protein [Oryza sativa
           Japonica Group] gi|113579713|dbj|BAF18076.1|
           Os05g0536200 [Oryza sativa Japonica Group]
           gi|215701294|dbj|BAG92718.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218197165|gb|EEC79592.1| hypothetical protein
           OsI_20774 [Oryza sativa Indica Group]
           gi|222632367|gb|EEE64499.1| hypothetical protein
           OsJ_19349 [Oryza sativa Japonica Group]
          Length = 280

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +3

Query: 111 GPGLYSDIGKKARDLLYKDFITDQKFTVTTYTANGVAI 224
           GPGLYSDIGKKARDLLY+D+ TDQKFT+TTY ANG AI
Sbjct: 9   GPGLYSDIGKKARDLLYRDYHTDQKFTLTTYAANGAAI 46


>ref|NP_001104949.1| voltage-dependent anion channel protein2 [Zea mays]
           gi|5929932|gb|AAD56653.1|AF178952_1 voltage-dependent
           anion channel protein 2 [Zea mays]
           gi|194701966|gb|ACF85067.1| unknown [Zea mays]
           gi|195624836|gb|ACG34248.1| outer mitochondrial membrane
           protein porin [Zea mays] gi|413946245|gb|AFW78894.1|
           outer membrane protein porinVoltage-dependent anion
           channel protein 2 [Zea mays]
          Length = 276

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +3

Query: 111 GPGLYSDIGKKARDLLYKDFITDQKFTVTTYTANGVAI 224
           GPGLYS+IGKKARDLLYKD+ TDQKFT+TTY ANG AI
Sbjct: 5   GPGLYSEIGKKARDLLYKDYHTDQKFTLTTYAANGAAI 42


>ref|XP_002440144.1| hypothetical protein SORBIDRAFT_09g026790 [Sorghum bicolor]
           gi|241945429|gb|EES18574.1| hypothetical protein
           SORBIDRAFT_09g026790 [Sorghum bicolor]
          Length = 276

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +3

Query: 111 GPGLYSDIGKKARDLLYKDFITDQKFTVTTYTANGVAI 224
           GPGLYS+IGKKARDLLYKD+ TDQKFT+TTY ANG AI
Sbjct: 5   GPGLYSEIGKKARDLLYKDYHTDQKFTLTTYAANGAAI 42


>ref|XP_004146750.1| PREDICTED: mitochondrial outer membrane protein porin of 36
           kDa-like [Cucumis sativus]
           gi|449505663|ref|XP_004162535.1| PREDICTED:
           mitochondrial outer membrane protein porin of 36
           kDa-like [Cucumis sativus]
          Length = 276

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +3

Query: 111 GPGLYSDIGKKARDLLYKDFITDQKFTVTTYTANGVAI 224
           GPGLYSDIGKKARDLLYKD+ +D KFTVTTYT+ GVAI
Sbjct: 4   GPGLYSDIGKKARDLLYKDYQSDHKFTVTTYTSGGVAI 41


>gb|AAA96275.1| voltage-dependent anion channel protein [Spinacia oleracea]
          Length = 276

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +3

Query: 111 GPGLYSDIGKKARDLLYKDFITDQKFTVTTYTANGVAI 224
           GPGLYSDIGK+ARDLLY+D+ +D KFT+TTYTANGVAI
Sbjct: 4   GPGLYSDIGKRARDLLYRDYQSDHKFTLTTYTANGVAI 41


Top