BLASTX nr result
ID: Dioscorea21_contig00004309
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00004309
(2393 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270418.1| PREDICTED: uncharacterized protein LOC100253... 595 e-167
ref|XP_003634701.1| PREDICTED: uncharacterized protein LOC100255... 594 e-167
ref|XP_002279683.2| PREDICTED: uncharacterized protein LOC100255... 592 e-166
dbj|BAE46412.1| Pre-mRNA splicing factor [Solanum tuberosum] 551 e-154
ref|XP_002332106.1| predicted protein [Populus trichocarpa] gi|2... 531 e-148
>ref|XP_002270418.1| PREDICTED: uncharacterized protein LOC100253849 isoform 1 [Vitis
vinifera]
Length = 693
Score = 595 bits (1533), Expect = e-167
Identities = 331/556 (59%), Positives = 372/556 (66%), Gaps = 17/556 (3%)
Frame = +3
Query: 540 ELQKRIDKSVEYAAKNGPEFEAMIREKQHDNPAYSFLFGGEGHAYYRYKLWLSTRPPGSA 719
EL KRIDK VEYAAKNGPEFE MIREKQ DNPAYSFLFGGEGH YYRYKLWLSTR G
Sbjct: 124 ELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGP 183
Query: 720 FN-PAYPSSMQMMSSPHNPMLNPSALSP-SPLGGAQASMM-VXXXXXXXXXXXXXXXXXX 890
FN P PSS+ MM SP NPM+NPS +P + GA ASM+
Sbjct: 184 FNSPFPPSSIPMMHSPMNPMMNPSLNAPPAAAAGASASMLGTPQMHQPPYLPFYDQQQQQ 243
Query: 891 XXXXXXMMGQARTDYDTSAKSFKGLSGPLPSDVAAEXXXXXXXXXGTKESIKGAKIWFMQ 1070
+G R D+D S+KSFKGLSGPLPSDVA E GTKESIKGAKIWFMQ
Sbjct: 244 HQHPQPFLGHGRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQ 303
Query: 1071 RSPFAPALAEALRDRIFALDDSERQLHIVFLANDILFDSLQRRVNLRELDNEAHAFKPVL 1250
RSPFAPALAEALRDR+FA+DDSERQLHI++LANDILFDSLQRR+N ELDNEA AFKPVL
Sbjct: 304 RSPFAPALAEALRDRVFAVDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVL 363
Query: 1251 GAMLARIYNNPHNKDANQSRLEKILQFWASKEVYDPETIGRLEHEMTGG---LSLRLPRE 1421
G+MLARIY+NP NK+ NQSRL+KILQFWASKEVYD +TI LE EM GG S P +
Sbjct: 364 GSMLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGEMIGGPPSNSFSGPHK 423
Query: 1422 ESTA--LDPSGL--------HQTLSQWQPEKQHSTPGSLEEQEAEMQLPHSAVXXXXXXX 1571
E +A +DPS + H + WQPEK S P LE+++ + Q+P A
Sbjct: 424 ELSAVPVDPSAVSGGLPQSAHHNIPHWQPEKPCSMPSLLEQEQPDKQMPSLAAMPPSLAT 483
Query: 1572 XXXXXYHQVPAGMY-PPVXXXXXXXXXXXXXXXXXXXXXXXDKTXXXXXXXXXXXXXXMV 1748
+ VPAG + + + MV
Sbjct: 484 QQFLP-NAVPAGPFLGSMPIPSSVQPANQQPALHLPTAAGLGEKLPPYPLFPPGLIPGMV 542
Query: 1749 RKMQIGSGVPYSPMSPLDIPTVIPPSTVPQSEILEQVSKFFKDIGEVNPSEGPMKRSESN 1928
RKMQIGSGVPYSPMSPLDIPTVIPPS V SEILE+VSKFFK+IGEVNPSEGPM+ S+S
Sbjct: 543 RKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSK 602
Query: 1929 DEDDEYEHEAPVRKGGACIPPPPNLQQVDPETGMFADGSIDRKXXXXXXXXXXXXATANP 2108
DEDDEYE ++PVRKGGACIPPPPNL QVDPETG +ADGS++RK ATANP
Sbjct: 603 DEDDEYERDSPVRKGGACIPPPPNL-QVDPETGTYADGSVERKPGSSGSARLGLGATANP 661
Query: 2109 NEVSQYDDVYTSYRKQ 2156
NEVSQYDDVYTSYRKQ
Sbjct: 662 NEVSQYDDVYTSYRKQ 677
>ref|XP_003634701.1| PREDICTED: uncharacterized protein LOC100255482 isoform 2 [Vitis
vinifera]
Length = 674
Score = 594 bits (1531), Expect = e-167
Identities = 323/541 (59%), Positives = 362/541 (66%), Gaps = 2/541 (0%)
Frame = +3
Query: 540 ELQKRIDKSVEYAAKNGPEFEAMIREKQHDNPAYSFLFGGEGHAYYRYKLWLSTRPPGSA 719
EL KRIDK VEYAAKNGPEFE MIREKQ DNPAYSFLFGGEGH YYRYKLWLSTR G
Sbjct: 125 ELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGP 184
Query: 720 FN-PAYPSSMQMMSSPHNPMLNPSALSPSPLGGAQASMMVXXXXXXXXXXXXXXXXXXXX 896
FN P PSS+ M SP NPM+NPS +P GA ASM+
Sbjct: 185 FNSPFPPSSIPTMHSPMNPMMNPSLNAPPAAAGASASMLGTPQMHQQPSYLPFYDQQQQQ 244
Query: 897 XXXXMMGQARTDYDTSAKSFKGLSGPLPSDVAAEXXXXXXXXXGTKESIKGAKIWFMQRS 1076
+G R D+D S+KSFKGLSGPLPSDVA E GTKESIKGAKIWFMQRS
Sbjct: 245 HPQPFLGHGRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRS 304
Query: 1077 PFAPALAEALRDRIFALDDSERQLHIVFLANDILFDSLQRRVNLRELDNEAHAFKPVLGA 1256
PFAPALAEALRDR+FALDDSERQLHI++LANDILFDSLQRR+N ELDNEA AFKPVLG+
Sbjct: 305 PFAPALAEALRDRVFALDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGS 364
Query: 1257 MLARIYNNPHNKDANQSRLEKILQFWASKEVYDPETIGRLEHEMTGGLSLRLPREESTAL 1436
MLARIY+NP NK+ NQSRL+KILQFWASKEVYD +TI LE +M GG P S +
Sbjct: 365 MLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGDMIGG-----PPGNSFSG 419
Query: 1437 DPSGLHQTLSQWQPEKQHSTPGSLEEQEAEMQLPHSAVXXXXXXXXXXXXYHQVPAGMY- 1613
P H + QWQP+K S P LE+++ + Q+P A + VPAG +
Sbjct: 420 LPQTAHHNVPQWQPDKPSSMPSLLEQEQPDKQMPSLAAMPPSLATQQFLP-NAVPAGPFL 478
Query: 1614 PPVXXXXXXXXXXXXXXXXXXXXXXXDKTXXXXXXXXXXXXXXMVRKMQIGSGVPYSPMS 1793
+ + MVRKMQIGSGVPYSPMS
Sbjct: 479 GSMPIPSSVQPANQQPALHLPTATGLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMS 538
Query: 1794 PLDIPTVIPPSTVPQSEILEQVSKFFKDIGEVNPSEGPMKRSESNDEDDEYEHEAPVRKG 1973
PLDIPTVIP S V SEILE+VSKFFK+IGEVNPSEGPM+ S+S DEDDEYE + PVRKG
Sbjct: 539 PLDIPTVIPLSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDEDDEYERDPPVRKG 598
Query: 1974 GACIPPPPNLQQVDPETGMFADGSIDRKXXXXXXXXXXXXATANPNEVSQYDDVYTSYRK 2153
GACIPPPPNL QVDPETG ++DGS++RK ATANPNEVSQYDDVY+SYRK
Sbjct: 599 GACIPPPPNL-QVDPETGTYSDGSVERKPGSSGSARLGLGATANPNEVSQYDDVYSSYRK 657
Query: 2154 Q 2156
Q
Sbjct: 658 Q 658
>ref|XP_002279683.2| PREDICTED: uncharacterized protein LOC100255482 isoform 1 [Vitis
vinifera]
Length = 692
Score = 592 bits (1525), Expect = e-166
Identities = 325/554 (58%), Positives = 365/554 (65%), Gaps = 15/554 (2%)
Frame = +3
Query: 540 ELQKRIDKSVEYAAKNGPEFEAMIREKQHDNPAYSFLFGGEGHAYYRYKLWLSTRPPGSA 719
EL KRIDK VEYAAKNGPEFE MIREKQ DNPAYSFLFGGEGH YYRYKLWLSTR G
Sbjct: 125 ELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGP 184
Query: 720 FN-PAYPSSMQMMSSPHNPMLNPSALSPSPLGGAQASMMVXXXXXXXXXXXXXXXXXXXX 896
FN P PSS+ M SP NPM+NPS +P GA ASM+
Sbjct: 185 FNSPFPPSSIPTMHSPMNPMMNPSLNAPPAAAGASASMLGTPQMHQQPSYLPFYDQQQQQ 244
Query: 897 XXXXMMGQARTDYDTSAKSFKGLSGPLPSDVAAEXXXXXXXXXGTKESIKGAKIWFMQRS 1076
+G R D+D S+KSFKGLSGPLPSDVA E GTKESIKGAKIWFMQRS
Sbjct: 245 HPQPFLGHGRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRS 304
Query: 1077 PFAPALAEALRDRIFALDDSERQLHIVFLANDILFDSLQRRVNLRELDNEAHAFKPVLGA 1256
PFAPALAEALRDR+FALDDSERQLHI++LANDILFDSLQRR+N ELDNEA AFKPVLG+
Sbjct: 305 PFAPALAEALRDRVFALDDSERQLHIIYLANDILFDSLQRRINPHELDNEALAFKPVLGS 364
Query: 1257 MLARIYNNPHNKDANQSRLEKILQFWASKEVYDPETIGRLEHEMTGG-----LSLRLPRE 1421
MLARIY+NP NK+ NQSRL+KILQFWASKEVYD +TI LE +M GG S L
Sbjct: 365 MLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGDMIGGPPGNSFSGLLKEL 424
Query: 1422 ESTALDPSGL--------HQTLSQWQPEKQHSTPGSLEEQEAEMQLPHSAVXXXXXXXXX 1577
+ DPS + H + QWQP+K S P LE+++ + Q+P A
Sbjct: 425 SAVPADPSAVSGGLPQTAHHNVPQWQPDKPSSMPSLLEQEQPDKQMPSLAAMPPSLATQQ 484
Query: 1578 XXXYHQVPAGMY-PPVXXXXXXXXXXXXXXXXXXXXXXXDKTXXXXXXXXXXXXXXMVRK 1754
+ VPAG + + + MVRK
Sbjct: 485 FLP-NAVPAGPFLGSMPIPSSVQPANQQPALHLPTATGLGEKLPPYPLFPPGLIPGMVRK 543
Query: 1755 MQIGSGVPYSPMSPLDIPTVIPPSTVPQSEILEQVSKFFKDIGEVNPSEGPMKRSESNDE 1934
MQIGSGVPYSPMSPLDIPTVIP S V SEILE+VSKFFK+IGEVNPSEGPM+ S+S DE
Sbjct: 544 MQIGSGVPYSPMSPLDIPTVIPLSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDE 603
Query: 1935 DDEYEHEAPVRKGGACIPPPPNLQQVDPETGMFADGSIDRKXXXXXXXXXXXXATANPNE 2114
DDEYE + PVRKGGACIPPPPNL QVDPETG ++DGS++RK ATANPNE
Sbjct: 604 DDEYERDPPVRKGGACIPPPPNL-QVDPETGTYSDGSVERKPGSSGSARLGLGATANPNE 662
Query: 2115 VSQYDDVYTSYRKQ 2156
VSQYDDVY+SYRKQ
Sbjct: 663 VSQYDDVYSSYRKQ 676
>dbj|BAE46412.1| Pre-mRNA splicing factor [Solanum tuberosum]
Length = 672
Score = 551 bits (1419), Expect = e-154
Identities = 308/551 (55%), Positives = 356/551 (64%), Gaps = 13/551 (2%)
Frame = +3
Query: 540 ELQKRIDKSVEYAAKNGPEFEAMIREKQHDNPAYSFLFGGEGHAYYRYKLWLSTRPPGSA 719
ELQKRIDK +EYA KNGPEFEAMIREKQ DNPAYSFLFGGEGH YYRYKLW+STRPPG A
Sbjct: 122 ELQKRIDKLIEYAVKNGPEFEAMIREKQQDNPAYSFLFGGEGHYYYRYKLWMSTRPPGGA 181
Query: 720 FNPAYPSSMQMMSSPHNPMLNPSALSPSPLGGAQASMMVXXXXXXXXXXXXXXXXXXXXX 899
FNP +PSS M P NPM++PS L+P A A+M+
Sbjct: 182 FNPPFPSSSLPMMHPPNPMMSPSPLTPYNASNASAAMLGPSHLHRPPFPPFYDQHHSQPF 241
Query: 900 XXXMMGQARTDYDTSAKSFKGLSGPLPSDVAAEXXXXXXXXXGTKESIKGAKIWFMQRSP 1079
+R DY+ S FKGLS PLPSDV E GTKESIKGAK WFMQRSP
Sbjct: 242 -------SRADYEHSYGPFKGLSRPLPSDVEMELSNVINNLTGTKESIKGAKSWFMQRSP 294
Query: 1080 FAPALAEALRDRIFALDDSERQLHIVFLANDILFDSLQRRVNLRELDNEAHAFKPVLGAM 1259
F PALAEALRDR+F++DDSERQLHIV+LANDILFDSLQRR+N ELDNEA AFKPVLG M
Sbjct: 295 FVPALAEALRDRVFSIDDSERQLHIVYLANDILFDSLQRRINPPELDNEALAFKPVLGPM 354
Query: 1260 LARIYNNPHNKDANQSRLEKILQFWASKEVYDPETIGRLEHEMTGG--LSLRLPREESTA 1433
LARIY+NP NK+ NQSRL+KILQFW +KEVYD +TI LE+EM GG + +P +E
Sbjct: 355 LARIYHNPQNKEENQSRLQKILQFWGTKEVYDQDTIRALENEMIGGHPANFSVPPKELIT 414
Query: 1434 LDPSG----LHQTLS----QWQPEKQHSTPGSLEEQEAEMQLPHSAVXXXXXXXXXXXXY 1589
D S +HQ + QW+P++Q SL +Q ++ L S
Sbjct: 415 PDTSAAAGLMHQAANQSTFQWKPDQQGL--ASLADQGKQIPLIPSVAPQQFHAG------ 466
Query: 1590 HQVPAGMYP---PVXXXXXXXXXXXXXXXXXXXXXXXDKTXXXXXXXXXXXXXXMVRKMQ 1760
VP +P P+ + MVRKMQ
Sbjct: 467 -AVPPTGFPGLMPIPSSVPPANLQPAAHLTPASIANIGEKVPPYPLFPPGLIPGMVRKMQ 525
Query: 1761 IGSGVPYSPMSPLDIPTVIPPSTVPQSEILEQVSKFFKDIGEVNPSEGPMKRSESNDEDD 1940
IGSGVPYSPMSPLDIPTVIPPSTV +SEILE+VSKFF+DIGEVNPSEGP+K+SES ++ D
Sbjct: 526 IGSGVPYSPMSPLDIPTVIPPSTVSESEILERVSKFFRDIGEVNPSEGPIKQSESANDYD 585
Query: 1941 EYEHEAPVRKGGACIPPPPNLQQVDPETGMFADGSIDRKXXXXXXXXXXXXATANPNEVS 2120
+YE ++PVRKGGACIPPP NL QVDPETG + DGSI +K ATANPNE +
Sbjct: 586 DYERDSPVRKGGACIPPPLNL-QVDPETGTYPDGSIPQKPGSNSSGRLGLGATANPNEPN 644
Query: 2121 QYDDVYTSYRK 2153
QYDDVYTSYRK
Sbjct: 645 QYDDVYTSYRK 655
>ref|XP_002332106.1| predicted protein [Populus trichocarpa] gi|222874926|gb|EEF12057.1|
predicted protein [Populus trichocarpa]
Length = 658
Score = 531 bits (1368), Expect = e-148
Identities = 307/557 (55%), Positives = 353/557 (63%), Gaps = 18/557 (3%)
Frame = +3
Query: 540 ELQKRIDKSVEYAAKNGPEFEAMIREKQHDNPAYSFLFGGEGHAYYRYKLWLSTRPPGSA 719
ELQKRIDK VEYA KNGPEFE MIREKQ DNPAYSFLFGGEGHAYYRYKLWLSTR P
Sbjct: 116 ELQKRIDKLVEYATKNGPEFEVMIREKQQDNPAYSFLFGGEGHAYYRYKLWLSTRGP--- 172
Query: 720 FNPAYPSSMQMMSSPHNPMLNPSALSPSPLGGAQASMMVXXXXXXXXXXXXXXXXXXXXX 899
NP + +S MM P NPM+N + P +
Sbjct: 173 LNPPFQAS-SMMHPPPNPMMNATVGPPPQMHQPSFPPFYDHHHQHTPQPFGV-------- 223
Query: 900 XXXMMGQARTDYDTSAKSFKGLSGPLPSDVAAEXXXXXXXXXGTKESIKGAKIWFMQRSP 1079
+R+D+D +KSFKGLSGPLP DVA E GTKESIKGAK WFMQRSP
Sbjct: 224 ------HSRSDFDQPSKSFKGLSGPLPPDVAVELSNVLNTLNGTKESIKGAKTWFMQRSP 277
Query: 1080 FAPALAEALRDRIFALDDSERQLHIVFLANDILFDSLQRRVNLRELDNEAHAFKPVLGAM 1259
FAPALAEALRDRIF+LDDSERQLHI++LANDILFDSLQRR+N +LDNEA AFKPVLG+M
Sbjct: 278 FAPALAEALRDRIFSLDDSERQLHIIYLANDILFDSLQRRINPHDLDNEALAFKPVLGSM 337
Query: 1260 LARIYNNPHNKDANQSRLEKILQFWASKEVYDPETIGRLEHEMTGGLSLRL----PREES 1427
LARIY+ P NKD NQSRL+KILQFWASKEVYD +TI +LE EM G + P+E S
Sbjct: 338 LARIYHYPQNKDENQSRLQKILQFWASKEVYDQDTIYKLEGEMVSGPPVNSFPGPPKELS 397
Query: 1428 T----ALDPSGLHQ-----TLSQWQPEKQHSTPGS--LEEQEAEMQLPHSAVXXXXXXXX 1574
T ++ +G Q QW P++Q S P L++Q + LP
Sbjct: 398 TGSTDSVPAAGFTQHATSHNAPQWPPDRQ-SVPDQEHLDKQMLPVMLP--------TLGN 448
Query: 1575 XXXXYHQVPAGMYP---PVXXXXXXXXXXXXXXXXXXXXXXXDKTXXXXXXXXXXXXXXM 1745
+ VPA +P P+ + M
Sbjct: 449 QQFIPNPVPAATFPGSLPINSSVLPAGQQPAPHLLQAPPANIAENLSPYPLFPPGLIPGM 508
Query: 1746 VRKMQIGSGVPYSPMSPLDIPTVIPPSTVPQSEILEQVSKFFKDIGEVNPSEGPMKRSES 1925
VRKMQIGSGVPYSP+SPLDIPT IPPS VP SEIL++VSKFFK+IGEVNPSEGPM R++
Sbjct: 509 VRKMQIGSGVPYSPLSPLDIPTTIPPSNVPPSEILDRVSKFFKEIGEVNPSEGPM-RADP 567
Query: 1926 NDEDDEYEHEAPVRKGGACIPPPPNLQQVDPETGMFADGSIDRKXXXXXXXXXXXXATAN 2105
DEDDEYE E+P+RKGGACIPPPPNL QV+PETG +ADGS++RK ATA+
Sbjct: 568 KDEDDEYERESPIRKGGACIPPPPNL-QVEPETGAYADGSVERK-HGTGSGRLGLGATAD 625
Query: 2106 PNEVSQYDDVYTSYRKQ 2156
PNE SQYDDVYTSYRKQ
Sbjct: 626 PNEPSQYDDVYTSYRKQ 642