BLASTX nr result
ID: Dioscorea21_contig00004285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00004285
(1264 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 505 e-140
ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|2... 484 e-134
ref|XP_003526693.1| PREDICTED: RNA polymerase sigma factor rpoD-... 484 e-134
dbj|BAM05478.1| sigma-like factor 5B [Glycine max] 481 e-133
ref|XP_002331841.1| predicted protein [Populus trichocarpa] gi|2... 481 e-133
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 505 bits (1300), Expect = e-140
Identities = 268/426 (62%), Positives = 315/426 (73%), Gaps = 25/426 (5%)
Frame = +1
Query: 7 CAVEPDYNEVAAALENIYKLSPV-EVSDVEDFN-----GELPRRRISKGKE------SXX 150
C+VE DYNE AA LENIYKLSP +VS+ ED G R+R++ + S
Sbjct: 90 CSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTLADDKAEKEVSDN 149
Query: 151 XXXXXXXXXXXLSLEKRVEM-------------RKRGKGRDEEDVKKLIREYSVSVDLVS 291
LSLEKR+ + +KR ++E++ L+REYS S DLVS
Sbjct: 150 VVRIHNKKPKRLSLEKRIALSKMKQEKAVASIQKKRDSKNEDENIDVLVREYSASTDLVS 209
Query: 292 LDWKKMKIPPVFKSAEQSKLFKLMQPMKAINQVKAALHKELNRYPTDAELAAAVNMTVTQ 471
LDWKKMKIPPV +E + LFKLMQPMK + +VK L K+L R PTD ELA A++M+ Q
Sbjct: 210 LDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDGELAEAMSMSAVQ 269
Query: 472 MRGHLEVGQAARNKLIKHNLRLVLFVINKHYQELATGTKFQDLCQAGVKGLVTAIDRFEP 651
+R H+EVGQAARNKLIKHNLRLVLFVINK++QE A G KFQDLCQAGVKGL+TAIDRFEP
Sbjct: 270 VRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKGLITAIDRFEP 329
Query: 652 KRGFRLSTYGLFWIRHSILRSLTQSSFTRVPFGIESVRQEIQKAKLELTLELQRSPTDEE 831
KR FRLSTYGLFWIRH+I+RS+T SSFTRV FG+ESVR EIQ+AKLEL +LQR PT+EE
Sbjct: 330 KRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELLFKLQRLPTEEE 389
Query: 832 IIARAGITPERYHDVMKASKPVLSLNAKHPTTQEEFINGITDIDGAGGDYRRQPXXXXXX 1011
II + GI+PERYH+VM+ASK VLSL+A+H TTQEE+INGITD++G GGD RQ
Sbjct: 390 IIEKVGISPERYHEVMRASKSVLSLHARHATTQEEYINGITDVEGVGGDRGRQLALLRLA 449
Query: 1012 XXXXXXXXXPKESLVIRQRFGLDGKGDRTLGEIAGNLSISREMVRKHEMKALMKLKHPTR 1191
PKESLV+RQR+GLDGKGDRTLGEIAGNLSISREMVRKHE+KALMKLKHP R
Sbjct: 450 LDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVKALMKLKHPAR 509
Query: 1192 VDYLRQ 1209
VDYLRQ
Sbjct: 510 VDYLRQ 515
>ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|222834948|gb|EEE73397.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 484 bits (1247), Expect = e-134
Identities = 263/426 (61%), Positives = 309/426 (72%), Gaps = 25/426 (5%)
Frame = +1
Query: 7 CAVEPDYNEVAAALENIYKLSP-VEVSDVEDFNGELPR-----RRISKG------KESXX 150
C + DYNE AA LENIYKLSP + SDVED +G + R R+IS+G +
Sbjct: 86 CTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKISEGGKETEDRTGKI 145
Query: 151 XXXXXXXXXXXLSLEKRVEMRKR---------GKGRDE----EDVKKLIREYSVSVDLVS 291
LSLEKR+ +R + GK +D E + L+REYS S DLVS
Sbjct: 146 IVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGKRKDRKNENEKIDDLVREYSASTDLVS 205
Query: 292 LDWKKMKIPPVFKSAEQSKLFKLMQPMKAINQVKAALHKELNRYPTDAELAAAVNMTVTQ 471
LDWKKMKIPPV S+E LFKLMQPMKA+ QVK L + L PTD ELA A+NM V Q
Sbjct: 206 LDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTDVELAKAINMDVLQ 265
Query: 472 MRGHLEVGQAARNKLIKHNLRLVLFVINKHYQELATGTKFQDLCQAGVKGLVTAIDRFEP 651
+R + VG+AARNKLIKHNLRLVLFVI K++Q+ A GTKFQD CQAGVKGL+TAIDRFEP
Sbjct: 266 VRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAGVKGLITAIDRFEP 325
Query: 652 KRGFRLSTYGLFWIRHSILRSLTQSSFTRVPFGIESVRQEIQKAKLELTLELQRSPTDEE 831
KR FRLSTYGLFWIRH+I+RS+T SSFTRV FG+ES+R EIQKAKLEL +L+R P ++E
Sbjct: 326 KRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELWFQLKRQPMEDE 385
Query: 832 IIARAGITPERYHDVMKASKPVLSLNAKHPTTQEEFINGITDIDGAGGDYRRQPXXXXXX 1011
II + I+PERYH+V +ASKPVLSL+++H TTQEEFI GI D+D GGD RRQ
Sbjct: 386 IIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEFIGGIADVD--GGDDRRQSALLRLA 443
Query: 1012 XXXXXXXXXPKESLVIRQRFGLDGKGDRTLGEIAGNLSISREMVRKHEMKALMKLKHPTR 1191
PKESLV+RQR+GLDGKGDRTLGEIAGNL+ISREMVRKHE+KALMKLKHPTR
Sbjct: 444 LDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 503
Query: 1192 VDYLRQ 1209
VDYLR+
Sbjct: 504 VDYLRR 509
>ref|XP_003526693.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
Length = 507
Score = 484 bits (1245), Expect = e-134
Identities = 257/435 (59%), Positives = 311/435 (71%), Gaps = 35/435 (8%)
Frame = +1
Query: 10 AVEPDYNEVAAALENIYKLSP----------------------VEVSDVEDFNGELPRRR 123
+++ DYNE AA LEN+YKLSP V+ S+ ++ G+ R
Sbjct: 81 SMDVDYNEAAAMLENLYKLSPASDNAECIDGKIKRVSRRGKKVVDESEEKELKGDWVVRN 140
Query: 124 ISKGKESXXXXXXXXXXXXXLSLEKRVEMR-------------KRGKGRDEEDVKKLIRE 264
+K K+ L+L++R+ ++ KR G E +++LIRE
Sbjct: 141 QNKNKKPKR-----------LNLDQRISLKNNKSGDEVIPTRKKRNVGNKIEKIEELIRE 189
Query: 265 YSVSVDLVSLDWKKMKIPPVFKSAEQSKLFKLMQPMKAINQVKAALHKELNRYPTDAELA 444
YSVS D VS+DWK+M+IPPV S+E + LFKLMQPMKA+ QVK L +EL R P D ELA
Sbjct: 190 YSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELA 249
Query: 445 AAVNMTVTQMRGHLEVGQAARNKLIKHNLRLVLFVINKHYQELATGTKFQDLCQAGVKGL 624
A NM++TQ+R ++VGQAARNKLIKHNLRLVLFVINK++ + A+G +FQDLCQAGVKGL
Sbjct: 250 DATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGL 309
Query: 625 VTAIDRFEPKRGFRLSTYGLFWIRHSILRSLTQSSFTRVPFGIESVRQEIQKAKLELTLE 804
+TAIDRFEP R FRLSTY LFWIRH+I+RS+T S+FTRVPFG+ESVR EIQKAK ELT E
Sbjct: 310 ITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQKAKTELTFE 369
Query: 805 LQRSPTDEEIIARAGITPERYHDVMKASKPVLSLNAKHPTTQEEFINGITDIDGAGGDYR 984
LQRSPT+EEII R I+PERYHDV+KASK +LSLN++H TTQEEFINGI D DG GD R
Sbjct: 370 LQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVDDDGVNGDNR 429
Query: 985 RQPXXXXXXXXXXXXXXXPKESLVIRQRFGLDGKGDRTLGEIAGNLSISREMVRKHEMKA 1164
+QP PKESLVIRQRFGLDGKGDRTLGEIAGNL+ISREMVRKHE+KA
Sbjct: 430 KQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKA 489
Query: 1165 LMKLKHPTRVDYLRQ 1209
LMKLKH R+DYLR+
Sbjct: 490 LMKLKHSARLDYLRR 504
>dbj|BAM05478.1| sigma-like factor 5B [Glycine max]
Length = 507
Score = 481 bits (1239), Expect = e-133
Identities = 256/435 (58%), Positives = 310/435 (71%), Gaps = 35/435 (8%)
Frame = +1
Query: 10 AVEPDYNEVAAALENIYKLSP----------------------VEVSDVEDFNGELPRRR 123
+++ DYNE AA LEN+YKLSP V+ S+ ++ G+ R
Sbjct: 81 SMDVDYNEAAAMLENLYKLSPASDNAECIDGKIKRVSRRGKKVVDESEEKELKGDWVVRN 140
Query: 124 ISKGKESXXXXXXXXXXXXXLSLEKRVEMR-------------KRGKGRDEEDVKKLIRE 264
+K K+ L+L++R+ ++ KR G E +++LIRE
Sbjct: 141 QNKNKKPKR-----------LNLDQRISLKNNKSGDEVIPTRKKRNVGNKIEKIEELIRE 189
Query: 265 YSVSVDLVSLDWKKMKIPPVFKSAEQSKLFKLMQPMKAINQVKAALHKELNRYPTDAELA 444
YSVS D VS+DWK+M+IPPV S+E + LFKLMQPMKA+ QVK L +EL R P D ELA
Sbjct: 190 YSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELA 249
Query: 445 AAVNMTVTQMRGHLEVGQAARNKLIKHNLRLVLFVINKHYQELATGTKFQDLCQAGVKGL 624
A NM++TQ+R ++VGQAARNKLIKHNLRLVLFVINK++ + A+G +FQDLCQAGVKGL
Sbjct: 250 DATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGL 309
Query: 625 VTAIDRFEPKRGFRLSTYGLFWIRHSILRSLTQSSFTRVPFGIESVRQEIQKAKLELTLE 804
+TAIDRFEP R FRLSTY LFWIRH+I+RS+T S+FTRVPFG+ESVR EIQKAK ELT E
Sbjct: 310 ITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQKAKTELTFE 369
Query: 805 LQRSPTDEEIIARAGITPERYHDVMKASKPVLSLNAKHPTTQEEFINGITDIDGAGGDYR 984
LQRSPT+EEII R I+PERYHDV+KASK +LSLN++H TTQEEFINGI D DG GD R
Sbjct: 370 LQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVDDDGVNGDNR 429
Query: 985 RQPXXXXXXXXXXXXXXXPKESLVIRQRFGLDGKGDRTLGEIAGNLSISREMVRKHEMKA 1164
+QP PKESLVIR RFGLDGKGDRTLGEIAGNL+ISREMVRKHE+KA
Sbjct: 430 KQPALLRLALDDVLDSLKPKESLVIRXRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKA 489
Query: 1165 LMKLKHPTRVDYLRQ 1209
LMKLKH R+DYLR+
Sbjct: 490 LMKLKHSARLDYLRR 504
>ref|XP_002331841.1| predicted protein [Populus trichocarpa] gi|222875079|gb|EEF12210.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 481 bits (1238), Expect = e-133
Identities = 259/424 (61%), Positives = 305/424 (71%), Gaps = 25/424 (5%)
Frame = +1
Query: 7 CAVEPDYNEVAAALENIYKLSP-VEVSDVEDFNGELPRRRISK-----------GKESXX 150
C + DYNE AA LENIYKLSP + SDVED NG + R R K G+ S
Sbjct: 86 CTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVNGVIRRCRQRKRKTSECEKEDDGRTSKI 145
Query: 151 XXXXXXXXXXXLSLEKRVEMR-------------KRGKGRDEEDVKKLIREYSVSVDLVS 291
LSL+KR+ +R ++G+ + E + +L+REYS S DL S
Sbjct: 146 IVRNQAKKAKRLSLQKRIALRIKSDEKLVTSVGKRKGRKNENEKIDELVREYSSSTDLAS 205
Query: 292 LDWKKMKIPPVFKSAEQSKLFKLMQPMKAINQVKAALHKELNRYPTDAELAAAVNMTVTQ 471
LDWKKMKIPPV SAE + LFKLMQPMKA QVK L + R PT+ ELA A +M V Q
Sbjct: 206 LDWKKMKIPPVLTSAEHAWLFKLMQPMKASLQVKEHLQENSGREPTEGELAEATDMDVLQ 265
Query: 472 MRGHLEVGQAARNKLIKHNLRLVLFVINKHYQELATGTKFQDLCQAGVKGLVTAIDRFEP 651
+R +EVG+AARNKLIKHNLRLVLFVINK++Q+ A G ++QDLCQAGVKGL+TAIDRFEP
Sbjct: 266 VRKQIEVGRAARNKLIKHNLRLVLFVINKYFQDYANGPRYQDLCQAGVKGLMTAIDRFEP 325
Query: 652 KRGFRLSTYGLFWIRHSILRSLTQSSFTRVPFGIESVRQEIQKAKLELTLELQRSPTDEE 831
KR FRLSTYGLFWIRH+I+RS+T SSFTRV FG+ES+R EIQKAKLEL +L R PT EE
Sbjct: 326 KRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELWFQLLRKPTGEE 385
Query: 832 IIARAGITPERYHDVMKASKPVLSLNAKHPTTQEEFINGITDIDGAGGDYRRQPXXXXXX 1011
II + GI+ ERYH+VM+ASKPVLSL+++H TTQEE I+G+ D++ GGD RRQ
Sbjct: 386 IIEKVGISIERYHEVMRASKPVLSLHSRHKTTQEELISGVADVN--GGDDRRQSALLRLA 443
Query: 1012 XXXXXXXXXPKESLVIRQRFGLDGKGDRTLGEIAGNLSISREMVRKHEMKALMKLKHPTR 1191
PKESLV+RQRFGLDGKGDRTLGEIAGNL+ISREMVRKHE KALMKLKHPTR
Sbjct: 444 LDDVLDSLKPKESLVVRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEAKALMKLKHPTR 503
Query: 1192 VDYL 1203
VDYL
Sbjct: 504 VDYL 507