BLASTX nr result

ID: Dioscorea21_contig00004277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004277
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...    73   2e-11
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...    72   4e-11
ref|XP_002272067.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...    68   9e-10
ref|XP_004156099.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...    67   2e-09
ref|XP_004140242.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...    67   2e-09

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = +1

Query: 154 RIMLTAIISLCFVILLVIVLHLYARYVMRRHLANRRANLISNFRIGVTSSSAFEMPETYS 333
           +IML AI SL FV++LVIVLH+YAR V+RR  A  RAN+    R+G+ ++++ E P+T  
Sbjct: 46  KIMLAAITSLSFVVVLVIVLHIYARCVLRRQ-ARERANI---RRLGLATATS-EPPKT-- 98

Query: 334 VGLDSSSIEKLPLFRYKRS--CSENPSLECSVCLSALE 441
            GLD   I  LP+F YK+S    E+   EC+VCLS L+
Sbjct: 99  -GLDPVVIASLPIFVYKQSNGDQEDNDQECAVCLSVLQ 135


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = +1

Query: 154 RIMLTAIISLCFVILLVIVLHLYARYVMRRHLANRRANLISNFRIGVTSSSAFEMPETYS 333
           +IMLTAI+SL  VI LVI LH+YAR V+RR  A RR+ L+S   I ++   + E P+T  
Sbjct: 31  KIMLTAIVSLSVVIALVITLHIYARCVLRRR-ARRRSALLS---ITLSRVHSDEPPKT-- 84

Query: 334 VGLDSSSIEKLPLFRYKRSCS--ENPSLECSVCLSALE 441
            GLD S I+ LP+F++  + +  E  + +C+VCLS LE
Sbjct: 85  -GLDQSVIDSLPMFKFSENDTQEEGGTTDCAVCLSVLE 121


>ref|XP_002272067.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 218

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
 Frame = +1

Query: 154 RIMLTAIISLCFVILLVIVLHLYARYVMRRHLANRRANLISNFRIGVTSSSAFEMPETYS 333
           ++++  +ISL F+++LVI+LH+YAR+++RR   +R    +++ R  V +    +  ET  
Sbjct: 14  KLLIAGVISLFFIVVLVILLHIYARHLLRRQDRSRLQASLNSSRTEVEAVGMNDSIETSK 73

Query: 334 VGLDSSSIEKLPLFRYKRS--CSENPSLECSVCLSALE 441
            GLD S I  LP+F Y+ +        +ECSVCLS +E
Sbjct: 74  RGLDPSVIASLPMFLYQPTDGLDGGDCVECSVCLSTIE 111


>ref|XP_004156099.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis sativus]
          Length = 229

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = +1

Query: 154 RIMLTAIISLCFVILLVIVLHLYARYVMRRHLANRRANLISNFRIGVTSSSAFEMPETYS 333
           +IMLTAI+SL  V++LVI LH+YARY +RRH   RR  ++    I     S    P    
Sbjct: 31  KIMLTAIVSLSLVVILVIALHIYARYALRRHA--RRQAVLRRLGILAFIDSGDHHPPPSR 88

Query: 334 VGLDSSSIEKLPLFRYK-RSCSENPS---LECSVCLSAL 438
            GLD   +  +P+  +K +S S +PS   +EC+VCLSA+
Sbjct: 89  SGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAI 127


>ref|XP_004140242.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like, partial [Cucumis
           sativus]
          Length = 255

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = +1

Query: 154 RIMLTAIISLCFVILLVIVLHLYARYVMRRHLANRRANLISNFRIGVTSSSAFEMPETYS 333
           +IMLTAI+SL  V++LVI LH+YARY +RRH   RR  ++    I     S    P    
Sbjct: 57  KIMLTAIVSLSLVVILVIALHIYARYALRRHA--RRQAVLRRLGILAFIDSGDHHPPPSR 114

Query: 334 VGLDSSSIEKLPLFRYK-RSCSENPS---LECSVCLSAL 438
            GLD   +  +P+  +K +S S +PS   +EC+VCLSA+
Sbjct: 115 SGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAI 153