BLASTX nr result
ID: Dioscorea21_contig00004265
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00004265 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|2... 84 9e-15 ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma... 79 3e-13 emb|CBI35689.3| unnamed protein product [Vitis vinifera] 79 3e-13 ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2... 79 3e-13 emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera] 79 3e-13 >ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|222870825|gb|EEF07956.1| predicted protein [Populus trichocarpa] Length = 224 Score = 84.3 bits (207), Expect = 9e-15 Identities = 43/80 (53%), Positives = 54/80 (67%) Frame = -2 Query: 241 LSANSDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXLKSMLGQFTQKRLGSP 62 LSANS E++AQVE+ GQ+LGKGIG+TW L++M GQ+TQKR GSP Sbjct: 129 LSANSIPGEEVHAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRTMFGQYTQKRQGSP 188 Query: 61 RSLHSVPNKRLKAEFSRVVQ 2 R + +PNKRLK EF RV+Q Sbjct: 189 RPMQGMPNKRLKQEFPRVLQ 208 >ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1 [Vitis vinifera] Length = 860 Score = 79.3 bits (194), Expect = 3e-13 Identities = 45/82 (54%), Positives = 54/82 (65%) Frame = -2 Query: 247 PSLSANSDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXLKSMLGQFTQKRLG 68 P LS+NS EI AQVE+ GQ+LGKG G+TW LKSMLGQF+QKR G Sbjct: 764 PPLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKSMLGQFSQKRQG 823 Query: 67 SPRSLHSVPNKRLKAEFSRVVQ 2 SPRSL + KRLK+EF+R +Q Sbjct: 824 SPRSLQGM-GKRLKSEFTRGLQ 844 >emb|CBI35689.3| unnamed protein product [Vitis vinifera] Length = 160 Score = 79.3 bits (194), Expect = 3e-13 Identities = 45/82 (54%), Positives = 54/82 (65%) Frame = -2 Query: 247 PSLSANSDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXLKSMLGQFTQKRLG 68 P LS+NS EI AQVE+ GQ+LGKG G+TW LKSMLGQF+QKR G Sbjct: 64 PPLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKSMLGQFSQKRQG 123 Query: 67 SPRSLHSVPNKRLKAEFSRVVQ 2 SPRSL + KRLK+EF+R +Q Sbjct: 124 SPRSLQGM-GKRLKSEFTRGLQ 144 >ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1| predicted protein [Populus trichocarpa] Length = 967 Score = 79.3 bits (194), Expect = 3e-13 Identities = 41/80 (51%), Positives = 51/80 (63%) Frame = -2 Query: 241 LSANSDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXLKSMLGQFTQKRLGSP 62 LS NS E++AQVE+ GQ+LGKGIG TW L++M GQ+T KR GSP Sbjct: 872 LSTNSIPGEEVHAQVEIDGQVLGKGIGLTWDEAKMQAAEKALGSLRTMFGQYTPKRQGSP 931 Query: 61 RSLHSVPNKRLKAEFSRVVQ 2 R + +PNKRLK EF RV+Q Sbjct: 932 RLMQGMPNKRLKQEFPRVLQ 951 >emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera] Length = 894 Score = 79.3 bits (194), Expect = 3e-13 Identities = 45/82 (54%), Positives = 54/82 (65%) Frame = -2 Query: 247 PSLSANSDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXLKSMLGQFTQKRLG 68 P LS+NS EI AQVE+ GQ+LGKG G+TW LKSMLGQF+QKR G Sbjct: 798 PPLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKSMLGQFSQKRQG 857 Query: 67 SPRSLHSVPNKRLKAEFSRVVQ 2 SPRSL + KRLK+EF+R +Q Sbjct: 858 SPRSLQGM-GKRLKSEFTRGLQ 878