BLASTX nr result

ID: Dioscorea21_contig00004178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004178
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578274.1| PREDICTED: multisite-specific tRNA:(cytosine...    64   1e-08
ref|XP_002460383.1| hypothetical protein SORBIDRAFT_02g027340 [S...    62   5e-08
ref|NP_001063445.1| Os09g0471900 [Oryza sativa Japonica Group] g...    60   2e-07
tpg|DAA61895.1| TPA: hypothetical protein ZEAMMB73_981348 [Zea m...    60   2e-07
tpg|DAA61894.1| TPA: hypothetical protein ZEAMMB73_981348 [Zea m...    60   2e-07

>ref|XP_003578274.1| PREDICTED: multisite-specific
            tRNA:(cytosine-C(5))-methyltransferase-like [Brachypodium
            distachyon]
          Length = 880

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/75 (44%), Positives = 49/75 (65%)
 Frame = -3

Query: 265  DASTIAIVCWKGKTNLSIMVSQLDAQELRERLSIRFPSEVTISEDKENNSNSEAEAKKIS 86
            D S IAIVCWKGKTNL +MVS LD +EL ER+S+RF  +V  ++D++     +   +++ 
Sbjct: 793  DPSAIAIVCWKGKTNLCVMVSPLDGKELLERVSLRFGLKVPKADDRKTKLKVDGSDEQLD 852

Query: 85   VDNELTDDFEAEPDN 41
               E T D E +P++
Sbjct: 853  CGAE-TVDPECKPES 866


>ref|XP_002460383.1| hypothetical protein SORBIDRAFT_02g027340 [Sorghum bicolor]
            gi|241923760|gb|EER96904.1| hypothetical protein
            SORBIDRAFT_02g027340 [Sorghum bicolor]
          Length = 874

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/75 (46%), Positives = 46/75 (61%)
 Frame = -3

Query: 265  DASTIAIVCWKGKTNLSIMVSQLDAQELRERLSIRFPSEVTISEDKENNSNSEAEAKKIS 86
            D S IAIVCWKGKTNL +MVS LD +EL ER+S+RF  ++    DKE  S   A + ++ 
Sbjct: 787  DPSAIAIVCWKGKTNLCVMVSPLDGKELLERISLRFGLKIP-KGDKEKPSEEIAGSDELL 845

Query: 85   VDNELTDDFEAEPDN 41
                  DD E  P++
Sbjct: 846  DCATEVDDQECFPES 860


>ref|NP_001063445.1| Os09g0471900 [Oryza sativa Japonica Group]
            gi|47848376|dbj|BAD22235.1| proliferating-cell nucleolar
            protein-like [Oryza sativa Japonica Group]
            gi|113631678|dbj|BAF25359.1| Os09g0471900 [Oryza sativa
            Japonica Group] gi|125606042|gb|EAZ45078.1| hypothetical
            protein OsJ_29718 [Oryza sativa Japonica Group]
          Length = 880

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%)
 Frame = -3

Query: 265  DASTIAIVCWKGKTNLSIMVSQLDAQELRERLSIRFPSEVTISEDKENNSNSEAEAKKIS 86
            D S IAIVCWKGKTNL +MVS LD +EL ER+ +R+  ++  ++D + +   +   ++  
Sbjct: 793  DPSAIAIVCWKGKTNLCVMVSPLDGKELLERICLRYGLKIPKADDVKPSMKIDGSDEQPD 852

Query: 85   VDNELTDDFEAEPDN 41
            +  E  D  EA P++
Sbjct: 853  LSTEAVDP-EAVPES 866


>tpg|DAA61895.1| TPA: hypothetical protein ZEAMMB73_981348 [Zea mays]
          Length = 553

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/75 (45%), Positives = 46/75 (61%)
 Frame = -3

Query: 265 DASTIAIVCWKGKTNLSIMVSQLDAQELRERLSIRFPSEVTISEDKENNSNSEAEAKKIS 86
           D S IAIVCWKGKTNL +MVS LD +EL ER+S+R   ++    DKE  S   A + ++ 
Sbjct: 466 DPSAIAIVCWKGKTNLCVMVSPLDGKELLERISLRHGLKIP-KGDKEKPSQEIAGSDELL 524

Query: 85  VDNELTDDFEAEPDN 41
                 DD E+ P++
Sbjct: 525 DCATEVDDQESLPES 539


>tpg|DAA61894.1| TPA: hypothetical protein ZEAMMB73_981348 [Zea mays]
          Length = 577

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/75 (45%), Positives = 46/75 (61%)
 Frame = -3

Query: 265 DASTIAIVCWKGKTNLSIMVSQLDAQELRERLSIRFPSEVTISEDKENNSNSEAEAKKIS 86
           D S IAIVCWKGKTNL +MVS LD +EL ER+S+R   ++    DKE  S   A + ++ 
Sbjct: 490 DPSAIAIVCWKGKTNLCVMVSPLDGKELLERISLRHGLKIP-KGDKEKPSQEIAGSDELL 548

Query: 85  VDNELTDDFEAEPDN 41
                 DD E+ P++
Sbjct: 549 DCATEVDDQESLPES 563


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