BLASTX nr result

ID: Dioscorea21_contig00004170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004170
         (2500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18797.3| unnamed protein product [Vitis vinifera]              524   e-146
ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus...   524   e-146
gb|ABK26871.1| unknown [Picea sitchensis]                             518   e-144
ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [S...   517   e-144
emb|CBI18542.3| unnamed protein product [Vitis vinifera]              517   e-144

>emb|CBI18797.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  524 bits (1350), Expect = e-146
 Identities = 265/308 (86%), Positives = 288/308 (93%), Gaps = 1/308 (0%)
 Frame = +2

Query: 209  LMRIGTRGSPLALAQAYETRDKLMSLHSELAEEGAIHIEIIKTTGDKILNQPLADIGGKG 388
            L+RIGTRGSPLALAQAYETRDKLM+ HSELAEEGAI I +IKTTGDKIL QPLADIGGKG
Sbjct: 20   LVRIGTRGSPLALAQAYETRDKLMAAHSELAEEGAIQIVVIKTTGDKILTQPLADIGGKG 79

Query: 389  LFTKEIDEALLEGRIDIAVHSMKDVPTYFPDGMILPCNLPREDVRDVFISLTASSLAELP 568
            LFTKEIDEALL G IDIAVHSMKDVPTY PD  ILPCNLPREDVRD FISLTA+SL+ELP
Sbjct: 80   LFTKEIDEALLNGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLSELP 139

Query: 569  AGSVVGSASLRRQSQILYRYPSLKVV-NFRGNVQTRLRKLNEGEVQATLLALAGLKRLNM 745
            AGS+VG+ASLRR+SQ+L+RY SL V+ NFRGNVQTRLRKLNEG VQATLLALAGLKRLNM
Sbjct: 140  AGSIVGTASLRRKSQLLHRYKSLNVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNM 199

Query: 746  TENVTAILSVEEMLPAIAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLD 925
            TENVT+ILS++EMLPA+AQGAIGIACRSNDDKMANYLASLNHE TRLAVACERAFLETLD
Sbjct: 200  TENVTSILSIDEMLPAVAQGAIGIACRSNDDKMANYLASLNHEVTRLAVACERAFLETLD 259

Query: 926  GSCRTPIAGYAYCDKDGDCLFRGLVASPDGTRVLETSRKGPFVLNDMISMGKDAGKELIS 1105
            GSCRTPIAGYA  D+DG+C+F+GLVASPDGT+VLETSRKGP+ L DMI MGKDAG+EL+S
Sbjct: 260  GSCRTPIAGYASHDEDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLS 319

Query: 1106 RAGPGFFD 1129
            RAGPGFFD
Sbjct: 320  RAGPGFFD 327


>ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis]
            gi|223540457|gb|EEF42025.1| porphobilinogen deaminase,
            putative [Ricinus communis]
          Length = 372

 Score =  524 bits (1350), Expect = e-146
 Identities = 264/308 (85%), Positives = 290/308 (94%), Gaps = 1/308 (0%)
 Frame = +2

Query: 209  LMRIGTRGSPLALAQAYETRDKLMSLHSELAEEGAIHIEIIKTTGDKILNQPLADIGGKG 388
            L+RIGTRGSPLALAQA+ETRDKLM+ HSELAEEGAI I IIKTTGDKIL QPLADIGGKG
Sbjct: 64   LIRIGTRGSPLALAQAHETRDKLMAKHSELAEEGAIQIVIIKTTGDKILTQPLADIGGKG 123

Query: 389  LFTKEIDEALLEGRIDIAVHSMKDVPTYFPDGMILPCNLPREDVRDVFISLTASSLAELP 568
            LFTKEIDEAL+ G IDIAVHSMKDVPTY P+  ILPCNLPREDVRD FISL+ASSLAELP
Sbjct: 124  LFTKEIDEALINGEIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSASSLAELP 183

Query: 569  AGSVVGSASLRRQSQILYRYPSLKVV-NFRGNVQTRLRKLNEGEVQATLLALAGLKRLNM 745
            +GSV+G+ASLRR+SQIL+RYPSL V+ NFRGNVQTRLRKLNEG VQATLLALAGLKRLNM
Sbjct: 184  SGSVIGTASLRRKSQILHRYPSLSVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNM 243

Query: 746  TENVTAILSVEEMLPAIAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLD 925
            TENVT++LS+++MLPA+AQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLD
Sbjct: 244  TENVTSVLSIDDMLPAVAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLD 303

Query: 926  GSCRTPIAGYAYCDKDGDCLFRGLVASPDGTRVLETSRKGPFVLNDMISMGKDAGKELIS 1105
            GSCRTPIAGYA  D++GDC+F+GLVASPDGTRVLETSRKGP+ L+DMI MGKDAGKEL+ 
Sbjct: 304  GSCRTPIAGYASKDENGDCIFKGLVASPDGTRVLETSRKGPYALDDMIMMGKDAGKELLL 363

Query: 1106 RAGPGFFD 1129
            +AGPGFFD
Sbjct: 364  QAGPGFFD 371


>gb|ABK26871.1| unknown [Picea sitchensis]
          Length = 373

 Score =  518 bits (1333), Expect = e-144
 Identities = 262/308 (85%), Positives = 277/308 (89%)
 Frame = +2

Query: 209  LMRIGTRGSPLALAQAYETRDKLMSLHSELAEEGAIHIEIIKTTGDKILNQPLADIGGKG 388
            L+RIGTRGSPLALAQAYETRDKL S H ELAEEGA+ I IIKTTGDKILNQPLADIGGKG
Sbjct: 66   LVRIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKG 125

Query: 389  LFTKEIDEALLEGRIDIAVHSMKDVPTYFPDGMILPCNLPREDVRDVFISLTASSLAELP 568
            LFTKEID+ALL G+IDIAVHSMKDVPTY P G ILPCNLPREDVRDVFI  TA SLAEL 
Sbjct: 126  LFTKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQ 185

Query: 569  AGSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLNEGEVQATLLALAGLKRLNMT 748
            AGS+VGSASLRRQSQILYRYPSLKV+NFRGNVQTRLRKL EGEV ATLLA AGLKRL M 
Sbjct: 186  AGSIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMI 245

Query: 749  ENVTAILSVEEMLPAIAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLDG 928
            ++VT +LS EEMLPAIAQGAIGIACRSNDDKMA+YLA+LNHEETRLAVACERAFLETLDG
Sbjct: 246  QHVTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDG 305

Query: 929  SCRTPIAGYAYCDKDGDCLFRGLVASPDGTRVLETSRKGPFVLNDMISMGKDAGKELISR 1108
            SCRTPIAGYA+ DKDG C FRGL+ASPDGTRVLETSRKG +   DM+SMG DAGKEL  R
Sbjct: 306  SCRTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTYEDMVSMGVDAGKELKER 365

Query: 1109 AGPGFFDW 1132
            AGP FFDW
Sbjct: 366  AGPAFFDW 373


>ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
            gi|241931444|gb|EES04589.1| hypothetical protein
            SORBIDRAFT_04g004630 [Sorghum bicolor]
          Length = 356

 Score =  517 bits (1332), Expect = e-144
 Identities = 266/361 (73%), Positives = 300/361 (83%), Gaps = 1/361 (0%)
 Frame = +2

Query: 50   ILSMRSTT-HHPLLAAPSNLRPCSSPTSLRRRRRHSPTXXXXXXXXXXXXXXXXLMRIGT 226
            ++S+R TT HH LL +P+ L        +R RRR  P                 L+RIGT
Sbjct: 1    MVSLRCTTAHHSLLGSPTCL--------VRPRRRACPVVRAAVAVEAGAEAKVSLIRIGT 52

Query: 227  RGSPLALAQAYETRDKLMSLHSELAEEGAIHIEIIKTTGDKILNQPLADIGGKGLFTKEI 406
            RGSPLALAQA+ETR+KL + HSELAEEGAI I IIKTTGD IL++PLADIGGKGLFTKEI
Sbjct: 53   RGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGLFTKEI 112

Query: 407  DEALLEGRIDIAVHSMKDVPTYFPDGMILPCNLPREDVRDVFISLTASSLAELPAGSVVG 586
            D+ALL+GRIDIAVHSMKDVPTY P+G ILPCNLPREDVRD FI LTA+SLAELPAGSVVG
Sbjct: 113  DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 172

Query: 587  SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLNEGEVQATLLALAGLKRLNMTENVTAI 766
            SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKL EG+V ATLLALAGL+RLNM EN TA+
Sbjct: 173  SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 232

Query: 767  LSVEEMLPAIAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLDGSCRTPI 946
            LSVEEMLPA+AQGAIGIACRSNDDKM  YL+SLNHE+TRLAVACER FL  LDG+CRTPI
Sbjct: 233  LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPI 292

Query: 947  AGYAYCDKDGDCLFRGLVASPDGTRVLETSRKGPFVLNDMISMGKDAGKELISRAGPGFF 1126
            A YAY DKDG+C FRGL+ASPDG++V ET+R GP+  +DM+ +GKDAG EL ++AGPGFF
Sbjct: 293  AAYAYRDKDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFF 352

Query: 1127 D 1129
            D
Sbjct: 353  D 353


>emb|CBI18542.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  517 bits (1331), Expect = e-144
 Identities = 277/431 (64%), Positives = 321/431 (74%), Gaps = 8/431 (1%)
 Frame = -1

Query: 2500 NRCKDPQWHNLDRYFEKLGLEVTPQSQLKEEAPGVMQQLMSLVQYTAELYHELHTLDRIE 2321
            NRCKDPQWHNLDRYFEKLG E+TPQ QLKEEA  VMQQLM+LVQYTAELYHELH LDR E
Sbjct: 233  NRCKDPQWHNLDRYFEKLGSELTPQKQLKEEADTVMQQLMTLVQYTAELYHELHALDRFE 292

Query: 2320 QDYRRKQKEEENINAGQKGNGLQILKQELKSQRRHVXXXXXXXXXXXXLEEVCRYCHIVV 2141
            QDYRRK +EE+N NA Q+G+ L +L+ ELKSQR+HV            LEE        V
Sbjct: 293  QDYRRKLQEEDNSNAAQRGDSLALLRAELKSQRKHVRSLKKKSLWSKILEE--------V 344

Query: 2140 MERLVDIVHFLNLEIHDNFGSP--DKSSIKSVNAHQRLGPAGLALHYANIISQIDXXXXX 1967
            ME+LVDIVHFL+LEIHD F +   DK    S N H++LG AGLALHYANII+QID     
Sbjct: 345  MEKLVDIVHFLHLEIHDAFATADGDKPIKGSTNNHKKLGNAGLALHYANIITQIDTLVSR 404

Query: 1966 XXXXXXXXRDALYQGLPPSMKCXXXXXXXXXXXKEELTVPQIKAEMEKTLHWLIPLASNT 1787
                    RDALYQGLPPS+K            KEELT+PQIKAEMEKTLHWL+P+A+NT
Sbjct: 405  SSSVPPNMRDALYQGLPPSIKSALRNRLQSFQLKEELTIPQIKAEMEKTLHWLVPIAANT 464

Query: 1786 TKAHHGFGWVGEWANTGSLCFSSELIERPAGHS-LIRIETLHHADKERTETYILDLVIWL 1610
            TKAHHGFGWVGEWANTG     SE+  +PAG + LIRIETLHHADKE+TE YIL+LV+WL
Sbjct: 465  TKAHHGFGWVGEWANTG-----SEVNRKPAGQTDLIRIETLHHADKEKTEAYILELVVWL 519

Query: 1609 HHLISQSRPS----NRSPIKSPVRSPTLNNVTVSLLTNKNPYSSLTQEDQEMLQDVTLRK 1442
            HHL+SQSR +     RSP+KSP+RSP   ++ +S     +P   LT EDQEML+DV+ RK
Sbjct: 520  HHLVSQSRTTINGGIRSPVKSPIRSPNQKSIQLSTHKPNSPSPMLTIEDQEMLRDVSKRK 579

Query: 1441 STPGISKSQEFDTTKSRLSKHQKLCKSSSHSPTSGYEKDLVS-RRSSMVPVINFDIDKMK 1265
             TPGISKSQEFDT K+RLSKH +L KSSSHSPTS  +K+L S RR S VPVI+FDID++K
Sbjct: 580  LTPGISKSQEFDTAKTRLSKHHRLSKSSSHSPTSETKKELFSIRRPSSVPVIDFDIDRIK 639

Query: 1264 ALDAIDRVDTL 1232
            ALD IDRVDT+
Sbjct: 640  ALDVIDRVDTI 650


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