BLASTX nr result

ID: Dioscorea21_contig00004165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004165
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573452.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   160   1e-37
dbj|BAJ90983.1| predicted protein [Hordeum vulgare subsp. vulgar...   154   8e-36
ref|XP_002520027.1| conserved hypothetical protein [Ricinus comm...   152   4e-35
ref|XP_002276949.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   152   4e-35
gb|AFK34710.1| unknown [Medicago truncatula]                          151   5e-35

>ref|XP_003573452.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6,
           mitochondrial-like [Brachypodium distachyon]
          Length = 114

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/112 (69%), Positives = 87/112 (77%), Gaps = 8/112 (7%)
 Frame = +2

Query: 65  TSMMAPATISNLARTLSKPPTGFRRGLNT--------LVSSHTAKWMQDTSKKSPMELIN 220
           T  + P  +  LA T +  P G  RGL+T        +V SHTAKWMQDTSKKSPMELIN
Sbjct: 5   TRRLLPTLLKTLAGTTA--PAGAARGLSTEKAVGAAAVVGSHTAKWMQDTSKKSPMELIN 62

Query: 221 EVPPIKVEGRIAACEGDSNPALGHPIEFICLDLKDPAICKYCGLRYVQNHHH 376
           EVPPIKVEGRI ACEGDSNPALGHPIE+ICLDL+ PA+CKYCGLRYVQ+HHH
Sbjct: 63  EVPPIKVEGRIVACEGDSNPALGHPIEYICLDLEAPAVCKYCGLRYVQDHHH 114


>dbj|BAJ90983.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326526857|dbj|BAK00817.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 113

 Score =  154 bits (389), Expect = 8e-36
 Identities = 70/84 (83%), Positives = 75/84 (89%)
 Frame = +2

Query: 125 TGFRRGLNTLVSSHTAKWMQDTSKKSPMELINEVPPIKVEGRIAACEGDSNPALGHPIEF 304
           TG   G   +V SHTAKWMQDTSKKSPMELINEVPPIKVEGRIAACEGD NPALGHPIE+
Sbjct: 30  TGKAVGAAAVVGSHTAKWMQDTSKKSPMELINEVPPIKVEGRIAACEGDKNPALGHPIEY 89

Query: 305 ICLDLKDPAICKYCGLRYVQNHHH 376
           ICLDL+ PA+CKYCGLRYVQ+HHH
Sbjct: 90  ICLDLEAPAVCKYCGLRYVQDHHH 113


>ref|XP_002520027.1| conserved hypothetical protein [Ricinus communis]
           gi|223540791|gb|EEF42351.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score =  152 bits (383), Expect = 4e-35
 Identities = 65/74 (87%), Positives = 72/74 (97%)
 Frame = +2

Query: 155 VSSHTAKWMQDTSKKSPMELINEVPPIKVEGRIAACEGDSNPALGHPIEFICLDLKDPAI 334
           +S+HTAKWMQDT+KKSPMELINE+PPIKVEGRI ACEGD+NPALGHPIEFICLDLK PA+
Sbjct: 29  ISNHTAKWMQDTTKKSPMELINEIPPIKVEGRIVACEGDTNPALGHPIEFICLDLKQPAV 88

Query: 335 CKYCGLRYVQNHHH 376
           CKYCGLRYVQ+HHH
Sbjct: 89  CKYCGLRYVQDHHH 102


>ref|XP_002276949.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6,
           mitochondrial [Vitis vinifera]
           gi|297737324|emb|CBI26525.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  152 bits (383), Expect = 4e-35
 Identities = 66/74 (89%), Positives = 72/74 (97%)
 Frame = +2

Query: 155 VSSHTAKWMQDTSKKSPMELINEVPPIKVEGRIAACEGDSNPALGHPIEFICLDLKDPAI 334
           +S+HTAKWMQDTSKKSPMELINEVPPIKVE RI ACEGD+NPALGHPIEFICLDLK+PA+
Sbjct: 29  ISNHTAKWMQDTSKKSPMELINEVPPIKVEARIVACEGDTNPALGHPIEFICLDLKEPAV 88

Query: 335 CKYCGLRYVQNHHH 376
           CKYCGLRYVQ+HHH
Sbjct: 89  CKYCGLRYVQDHHH 102


>gb|AFK34710.1| unknown [Medicago truncatula]
          Length = 105

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/105 (68%), Positives = 85/105 (80%), Gaps = 4/105 (3%)
 Frame = +2

Query: 74  MAPATISNLAR-TLSKPPTGFRRGLNTL---VSSHTAKWMQDTSKKSPMELINEVPPIKV 241
           MA + + NL R + S   T   R  + +   +S+HTAKWMQDTSKKSPMELINEVPPIKV
Sbjct: 1   MASSILKNLTRFSSSTATTNATRSFSLVTSQISNHTAKWMQDTSKKSPMELINEVPPIKV 60

Query: 242 EGRIAACEGDSNPALGHPIEFICLDLKDPAICKYCGLRYVQNHHH 376
           EGRI ACEGD++PALGHPIE+ICLDL +PA+CKYCGLRYVQ+HHH
Sbjct: 61  EGRIVACEGDTDPALGHPIEYICLDLAEPAVCKYCGLRYVQDHHH 105


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