BLASTX nr result

ID: Dioscorea21_contig00004132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004132
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ89285.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   1e-07
dbj|BAK03834.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   1e-07
gb|EAY73207.1| hypothetical protein OsI_01078 [Oryza sativa Indi...    61   3e-07
ref|NP_001042540.1| Os01g0238800 [Oryza sativa Japonica Group] g...    61   3e-07
dbj|BAB17206.1| unknown protein [Oryza sativa Japonica Group] gi...    61   3e-07

>dbj|BAJ89285.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 90

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +1

Query: 208 VEMSFCVESLLPMHSVTAAALMNSMLSIPGNGYGWLLE 321
           VE SFCVESLLP+HS TAAA M SML++PG G GWL E
Sbjct: 47  VEASFCVESLLPLHSATAAARMTSMLAVPGRGLGWLTE 84


>dbj|BAK03834.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 90

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +1

Query: 208 VEMSFCVESLLPMHSVTAAALMNSMLSIPGNGYGWLLE 321
           VE SFCVESLLP+HS TAAA M SML++PG G GWL E
Sbjct: 47  VEASFCVESLLPLHSATAAARMTSMLAVPGRGLGWLTE 84


>gb|EAY73207.1| hypothetical protein OsI_01078 [Oryza sativa Indica Group]
          Length = 97

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 35/75 (46%), Positives = 41/75 (54%)
 Frame = +1

Query: 97  ATRLSAETSASRPPLXXXXXXXXXXXXXXXXXXXXXXVEMSFCVESLLPMHSVTAAALMN 276
           A   SA +SA+RP L                      VE+S CVESLLP+HS TAAA M 
Sbjct: 25  ARSASASSSAARPSLRRALAAPPRILRSP--------VELSVCVESLLPLHSATAAARMT 76

Query: 277 SMLSIPGNGYGWLLE 321
           SML++PG G GWL E
Sbjct: 77  SMLAVPGQGLGWLTE 91


>ref|NP_001042540.1| Os01g0238800 [Oryza sativa Japonica Group]
           gi|56784112|dbj|BAD81483.1| unknown protein [Oryza
           sativa Japonica Group] gi|113532071|dbj|BAF04454.1|
           Os01g0238800 [Oryza sativa Japonica Group]
           gi|215693111|dbj|BAG88493.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218187842|gb|EEC70269.1| hypothetical protein
           OsI_01085 [Oryza sativa Indica Group]
           gi|222618071|gb|EEE54203.1| hypothetical protein
           OsJ_01045 [Oryza sativa Japonica Group]
          Length = 94

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 35/75 (46%), Positives = 41/75 (54%)
 Frame = +1

Query: 97  ATRLSAETSASRPPLXXXXXXXXXXXXXXXXXXXXXXVEMSFCVESLLPMHSVTAAALMN 276
           A   SA +SA+RP L                      VE+S CVESLLP+HS TAAA M 
Sbjct: 22  ARSASASSSAARPSLRRALAAPPRILRSP--------VELSVCVESLLPLHSATAAARMT 73

Query: 277 SMLSIPGNGYGWLLE 321
           SML++PG G GWL E
Sbjct: 74  SMLAVPGQGLGWLTE 88


>dbj|BAB17206.1| unknown protein [Oryza sativa Japonica Group]
           gi|215693350|dbj|BAG88732.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 95

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 35/75 (46%), Positives = 41/75 (54%)
 Frame = +1

Query: 97  ATRLSAETSASRPPLXXXXXXXXXXXXXXXXXXXXXXVEMSFCVESLLPMHSVTAAALMN 276
           A   SA +SA+RP L                      VE+S CVESLLP+HS TAAA M 
Sbjct: 22  ARSASASSSAARPSLRRALAAPPRILRSP--------VELSVCVESLLPLHSATAAARMT 73

Query: 277 SMLSIPGNGYGWLLE 321
           SML++PG G GWL E
Sbjct: 74  SMLAVPGQGLGWLTE 88


Top