BLASTX nr result

ID: Dioscorea21_contig00004097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004097
         (2288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   663   0.0  
ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...   662   0.0  
emb|CBI15398.3| unnamed protein product [Vitis vinifera]              651   0.0  
ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2...   656   0.0  
dbj|BAJ99226.1| predicted protein [Hordeum vulgare subsp. vulgare]    646   0.0  

>ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
            [Vitis vinifera]
          Length = 580

 Score =  663 bits (1710), Expect(2) = 0.0
 Identities = 332/463 (71%), Positives = 381/463 (82%), Gaps = 1/463 (0%)
 Frame = +3

Query: 303  SEDEEANGSGEDRDSTDVNGKEEPAAKKQKITPRKVSS-IMSSEPFTILPISELTMNAIK 479
            S  EE     EDR+      +E   + K+K   +K  S IMS+E F+ L +SE TM AI 
Sbjct: 49   STPEEEEAVAEDREEEVAEEREAVESLKEKKKAKKSGSGIMSTEAFSALGLSEPTMKAIN 108

Query: 480  EMGFVNMTQIQAKAIPPLLEGKDVMGAARTGSGKTLAFLIPAVELLYNVKFSPRNGTGVI 659
            +MGF NMTQIQA+AIPPLL GKDV+GAARTGSGKTLAFLIPAVELLY++ F PRNGTGV+
Sbjct: 109  DMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLIPAVELLYHISFMPRNGTGVV 168

Query: 660  IICPTRELAIQTHAVAKDLLKHHSQSVGLVMGGAPRKTEAERLGKGVNLLVATPGRLLDH 839
            +ICPTRELAIQTHAVAKDLLK+H+Q++GLV+GG+ R+ EAERL KG NLLVATPGRLLDH
Sbjct: 169  VICPTRELAIQTHAVAKDLLKYHTQTLGLVIGGSARRGEAERLAKGANLLVATPGRLLDH 228

Query: 840  LQNTKGFIYKNLQCLMIDEADRILEQNFEDDMKQIFKRLPENRQTALFSATQTKEVEDFA 1019
            LQNTKGFIYKNL+CL+IDEADRILE NFE++MKQI K LP+ RQTALFSATQTK+VED A
Sbjct: 229  LQNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKLLPKERQTALFSATQTKKVEDLA 288

Query: 1020 RLSFQKKPVYIGVDDGRSRVTVEGLQQGYCVIPSDKRFLVLYAFLKKHMSEKVMVFFSSC 1199
            RLSFQ  PVYI VDDGR++VT EGLQQGYCV+PS KRF++LY+FLK+++S+KVMVFFSSC
Sbjct: 289  RLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSC 348

Query: 1200 NSVKFHSELLKYIQIECFDIHGKQKQEKRTNTFFDFCKANKGILLCTDVAARGLDIPAVD 1379
            NSVK+HSELL+YIQ++C DIHGKQKQ+KRT+TFFDFCKA KGILLCTDVAARGLDIP VD
Sbjct: 349  NSVKYHSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVD 408

Query: 1380 WIVQYDPPDEPKEYIHRVGRTARGEGGKGQAXXXXXXXXXXXXTYLKAAKVPVKEYDYXX 1559
            WIVQYDPPDEPKEYIHRVGRTARGEG KG A             YLKAAKVPVKEY+Y  
Sbjct: 409  WIVQYDPPDEPKEYIHRVGRTARGEGKKGNALLFLIPEELQFLRYLKAAKVPVKEYEYDV 468

Query: 1560 XXXXXXXXXXXXXVGENYYLNQSAKDAYRSYLLSYNSHSMKEI 1688
                         V  NYYLN+SAKDAYRSY+L+YNSHSMK+I
Sbjct: 469  KKLANVQSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSMKDI 511



 Score = 59.7 bits (143), Expect(2) = 0.0
 Identities = 29/45 (64%), Positives = 36/45 (80%), Gaps = 2/45 (4%)
 Frame = +2

Query: 1766 LNLESSASKFRKKMRKVDGSRHGISASNPYGRKSG--DTRQFTRF 1894
            L+++SSASKFRKK  KV+GSR+G S SNPYGR+ G  D RQF R+
Sbjct: 536  LSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRGQDDKRQFVRY 580


>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 590

 Score =  662 bits (1709), Expect(2) = 0.0
 Identities = 333/468 (71%), Positives = 384/468 (82%), Gaps = 5/468 (1%)
 Frame = +3

Query: 300  VSEDEEANGSGEDRDSTDVNGKEEPAAKKQK-----ITPRKVSSIMSSEPFTILPISELT 464
            + E+ +     + + ++D N  EE    K +        ++ S IMS++ F  L +SE T
Sbjct: 56   IEEESKDKKKKKKKKNSDYNNNEENEVSKNEGQDGDKVRKRGSGIMSTDSFESLGLSEPT 115

Query: 465  MNAIKEMGFVNMTQIQAKAIPPLLEGKDVMGAARTGSGKTLAFLIPAVELLYNVKFSPRN 644
              AI+EMGF  +TQIQA+AIPPLL GKDV+GAARTGSGKTLAFLIPAVELLYNV F+PRN
Sbjct: 116  RKAIQEMGFQYLTQIQARAIPPLLVGKDVLGAARTGSGKTLAFLIPAVELLYNVHFAPRN 175

Query: 645  GTGVIIICPTRELAIQTHAVAKDLLKHHSQSVGLVMGGAPRKTEAERLGKGVNLLVATPG 824
            GTGV++ICPTRELAIQTHAVAKDLLK+HSQ++GLV+GG+ RK EAER+ KGVNLLVATPG
Sbjct: 176  GTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARKGEAERIVKGVNLLVATPG 235

Query: 825  RLLDHLQNTKGFIYKNLQCLMIDEADRILEQNFEDDMKQIFKRLPENRQTALFSATQTKE 1004
            RLLDHLQNTKGFIYKNL+CLMIDEADRILE NFE++MKQI K LP++RQTALFSATQTK+
Sbjct: 236  RLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKSRQTALFSATQTKK 295

Query: 1005 VEDFARLSFQKKPVYIGVDDGRSRVTVEGLQQGYCVIPSDKRFLVLYAFLKKHMSEKVMV 1184
            VED ARLSFQ  PVYI VDDGR++VT EGLQQGYCV+ S KRF++LY+FLK+++S+KVMV
Sbjct: 296  VEDLARLSFQITPVYIDVDDGRTKVTNEGLQQGYCVVHSAKRFILLYSFLKRNLSKKVMV 355

Query: 1185 FFSSCNSVKFHSELLKYIQIECFDIHGKQKQEKRTNTFFDFCKANKGILLCTDVAARGLD 1364
            FFSSCNSVKFHSELL+YIQ+ECFDIHGKQKQ+KRT TFFDFCKA KGILLCTDVAARGLD
Sbjct: 356  FFSSCNSVKFHSELLRYIQVECFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLD 415

Query: 1365 IPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGQAXXXXXXXXXXXXTYLKAAKVPVKE 1544
            IPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKG A             YLKAAKVPVKE
Sbjct: 416  IPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKE 475

Query: 1545 YDYXXXXXXXXXXXXXXXVGENYYLNQSAKDAYRSYLLSYNSHSMKEI 1688
            Y++               V  NYYLN+SAKDAYRSY+L+YNSHSMK+I
Sbjct: 476  YEFDVKKLANVQSHLEKLVANNYYLNKSAKDAYRSYILAYNSHSMKDI 523



 Score = 50.1 bits (118), Expect(2) = 0.0
 Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
 Frame = +2

Query: 1766 LNLESSASKFRKKMRKVDGSRHGISASNPYGRK--SGDTRQFTR 1891
            LN++S+ASKFRKK  K  GSR+G S SNPYGR+    +TRQF R
Sbjct: 548  LNIDSNASKFRKKAHK--GSRNGFSESNPYGRQRDEDNTRQFVR 589


>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  651 bits (1679), Expect(2) = 0.0
 Identities = 320/423 (75%), Positives = 364/423 (86%)
 Frame = +3

Query: 420  MSSEPFTILPISELTMNAIKEMGFVNMTQIQAKAIPPLLEGKDVMGAARTGSGKTLAFLI 599
            MS+E F+ L +SE TM AI +MGF NMTQIQA+AIPPLL GKDV+GAARTGSGKTLAFLI
Sbjct: 1    MSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLI 60

Query: 600  PAVELLYNVKFSPRNGTGVIIICPTRELAIQTHAVAKDLLKHHSQSVGLVMGGAPRKTEA 779
            PAVELLY++ F PRNGTGV++ICPTRELAIQTHAVAKDLLK+H+Q++GLV+GG+ R+ EA
Sbjct: 61   PAVELLYHISFMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLGLVIGGSARRGEA 120

Query: 780  ERLGKGVNLLVATPGRLLDHLQNTKGFIYKNLQCLMIDEADRILEQNFEDDMKQIFKRLP 959
            ERL KG NLLVATPGRLLDHLQNTKGFIYKNL+CL+IDEADRILE NFE++MKQI K LP
Sbjct: 121  ERLAKGANLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKLLP 180

Query: 960  ENRQTALFSATQTKEVEDFARLSFQKKPVYIGVDDGRSRVTVEGLQQGYCVIPSDKRFLV 1139
            + RQTALFSATQTK+VED ARLSFQ  PVYI VDDGR++VT EGLQQGYCV+PS KRF++
Sbjct: 181  KERQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFVL 240

Query: 1140 LYAFLKKHMSEKVMVFFSSCNSVKFHSELLKYIQIECFDIHGKQKQEKRTNTFFDFCKAN 1319
            LY+FLK+++S+KVMVFFSSCNSVK+HSELL+YIQ++C DIHGKQKQ+KRT+TFFDFCKA 
Sbjct: 241  LYSFLKRNLSKKVMVFFSSCNSVKYHSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAE 300

Query: 1320 KGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGQAXXXXXXXXX 1499
            KGILLCTDVAARGLDIP VDWIVQYDPPDEPKEYIHRVGRTARGEG KG A         
Sbjct: 301  KGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGEGKKGNALLFLIPEEL 360

Query: 1500 XXXTYLKAAKVPVKEYDYXXXXXXXXXXXXXXXVGENYYLNQSAKDAYRSYLLSYNSHSM 1679
                YLKAAKVPVKEY+Y               V  NYYLN+SAKDAYRSY+L+YNSHSM
Sbjct: 361  QFLRYLKAAKVPVKEYEYDVKKLANVQSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSM 420

Query: 1680 KEI 1688
            K+I
Sbjct: 421  KDI 423



 Score = 59.7 bits (143), Expect(2) = 0.0
 Identities = 29/45 (64%), Positives = 36/45 (80%), Gaps = 2/45 (4%)
 Frame = +2

Query: 1766 LNLESSASKFRKKMRKVDGSRHGISASNPYGRKSG--DTRQFTRF 1894
            L+++SSASKFRKK  KV+GSR+G S SNPYGR+ G  D RQF R+
Sbjct: 448  LSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRGQDDKRQFVRY 492


>ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1|
            predicted protein [Populus trichocarpa]
          Length = 574

 Score =  656 bits (1693), Expect(2) = 0.0
 Identities = 332/462 (71%), Positives = 379/462 (82%)
 Frame = +3

Query: 303  SEDEEANGSGEDRDSTDVNGKEEPAAKKQKITPRKVSSIMSSEPFTILPISELTMNAIKE 482
            SE+EE     E+ +       +E A KK K        IMS+E F  L +SE T   I+E
Sbjct: 57   SEEEEKEKEKEEEE-------KEKAVKKVK----SGGGIMSTESFDSLGLSEATRKTIQE 105

Query: 483  MGFVNMTQIQAKAIPPLLEGKDVMGAARTGSGKTLAFLIPAVELLYNVKFSPRNGTGVII 662
            MGF N+TQIQA+AIPPLL GKDV+GAARTGSGKTLAFLIPAVELL+NV F+PRNGTGV++
Sbjct: 106  MGFENLTQIQARAIPPLLVGKDVLGAARTGSGKTLAFLIPAVELLHNVHFAPRNGTGVVV 165

Query: 663  ICPTRELAIQTHAVAKDLLKHHSQSVGLVMGGAPRKTEAERLGKGVNLLVATPGRLLDHL 842
            ICPTRELAIQTHAVAKDLLK+HSQ++GLV+GGA R+ EAERL KGVNLLVATPGRLLDHL
Sbjct: 166  ICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGAARRGEAERLVKGVNLLVATPGRLLDHL 225

Query: 843  QNTKGFIYKNLQCLMIDEADRILEQNFEDDMKQIFKRLPENRQTALFSATQTKEVEDFAR 1022
            QNTKGFIYKNL+CL IDEADRILE NFE++MKQI K LP+ RQTALFSATQTK+VED AR
Sbjct: 226  QNTKGFIYKNLKCLTIDEADRILEANFEEEMKQIIKLLPKARQTALFSATQTKKVEDLAR 285

Query: 1023 LSFQKKPVYIGVDDGRSRVTVEGLQQGYCVIPSDKRFLVLYAFLKKHMSEKVMVFFSSCN 1202
            LSFQ  PVYI VDDGR++VT EGLQQGYCV+PS KRF++LY+F K+++S+KVMVFFSSCN
Sbjct: 286  LSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFVLLYSFFKRNLSKKVMVFFSSCN 345

Query: 1203 SVKFHSELLKYIQIECFDIHGKQKQEKRTNTFFDFCKANKGILLCTDVAARGLDIPAVDW 1382
            SVKFH++LL+YIQ+ECFDIHGKQKQ+KRT+TFFDFCKA KGILLCTDVAARGLDIPAVDW
Sbjct: 346  SVKFHADLLRYIQVECFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDW 405

Query: 1383 IVQYDPPDEPKEYIHRVGRTARGEGGKGQAXXXXXXXXXXXXTYLKAAKVPVKEYDYXXX 1562
            IVQ+DPPDEPKEYIHRVGRTARGEG KG A             YLKAAKVPVKEY++   
Sbjct: 406  IVQFDPPDEPKEYIHRVGRTARGEGAKGNALLFLIPEELQFLRYLKAAKVPVKEYEFDQK 465

Query: 1563 XXXXXXXXXXXXVGENYYLNQSAKDAYRSYLLSYNSHSMKEI 1688
                        V  NYYLN+SAKDAYRSY+L+YNSHSMK+I
Sbjct: 466  KLANVQSQLEKLVANNYYLNKSAKDAYRSYMLAYNSHSMKDI 507



 Score = 50.8 bits (120), Expect(2) = 0.0
 Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
 Frame = +2

Query: 1766 LNLESSASKFRKKMRKVDGSRHGISASNPYGRKS--GDTRQFTRF 1894
            LN+ES+ASKFRKK  K  GSR+G + SNPYGR+S   + RQF R+
Sbjct: 532  LNMESNASKFRKKTHK--GSRNGFNESNPYGRQSDGDEKRQFARY 574


>dbj|BAJ99226.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 591

 Score =  646 bits (1666), Expect(2) = 0.0
 Identities = 323/467 (69%), Positives = 385/467 (82%), Gaps = 6/467 (1%)
 Frame = +3

Query: 306  EDEEANGSGEDRDSTDVNGKEEPAAKKQKITPRKVSSIMSSEPFTILPISELTMNAIKEM 485
            E++  + +G++R   D   +E    KK+K   ++ S I++S  F+ LPISELT  AI+EM
Sbjct: 57   EEQPQSDAGDERHEHDKEVQETGKEKKKK-KDKEGSGILTSMLFSELPISELTAKAIREM 115

Query: 486  GFVNMTQIQAKAIPPLLEGKDVMGAARTGSGKTLAFLIPAVELLYNVKFSPRNGTGVIII 665
             + ++ QIQA++IP LLEG+DVMGAA+TGSGKTLAFLIPA+ELLYN+ FSPRNGTGVI++
Sbjct: 116  NYTHLAQIQARSIPHLLEGRDVMGAAKTGSGKTLAFLIPAIELLYNLHFSPRNGTGVIVV 175

Query: 666  CPTRELAIQTHAVAKDLLKHHSQSVGLVMGGAPRKTEAERLGKGVNLLVATPGRLLDHLQ 845
            CPTRELAIQTH VAK+L+K+HSQ++G V+GG  R+TEA++L KGVNLLVATPGRLLDHLQ
Sbjct: 176  CPTRELAIQTHNVAKELMKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 235

Query: 846  NTKGFIYKNLQCLMIDEADRILEQNFEDDMKQIFKRLPENRQTALFSATQTKEVEDFARL 1025
            NTKGFIYK L+CL+IDEADRILEQNFE+DMKQIFKRLP+NRQT LFSATQTKEVEDFA+L
Sbjct: 236  NTKGFIYKRLKCLIIDEADRILEQNFEEDMKQIFKRLPQNRQTVLFSATQTKEVEDFAKL 295

Query: 1026 SFQK------KPVYIGVDDGRSRVTVEGLQQGYCVIPSDKRFLVLYAFLKKHMSEKVMVF 1187
            SF+K      KPVYI VDDG+S  TVEGLQQGYCVIPSDKRFLVLYAFLKK  S+KVMVF
Sbjct: 296  SFEKNEERKEKPVYISVDDGKSNATVEGLQQGYCVIPSDKRFLVLYAFLKKKQSKKVMVF 355

Query: 1188 FSSCNSVKFHSELLKYIQIECFDIHGKQKQEKRTNTFFDFCKANKGILLCTDVAARGLDI 1367
            FSSC+SVKFH+ELL ++QIEC DIHGKQKQ+KRT TFF+FCKA+KGILLCT+VAARGLDI
Sbjct: 356  FSSCSSVKFHAELLNFLQIECEDIHGKQKQQKRTTTFFNFCKADKGILLCTNVAARGLDI 415

Query: 1368 PAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGQAXXXXXXXXXXXXTYLKAAKVPVKEY 1547
            P VD+IVQYDPPDEPK+YIHRVGRTARGE GKG A             YLKAAK+ + EY
Sbjct: 416  PDVDYIVQYDPPDEPKDYIHRVGRTARGEKGKGSALLFLLPQELKFLIYLKAAKISLTEY 475

Query: 1548 DYXXXXXXXXXXXXXXXVGENYYLNQSAKDAYRSYLLSYNSHSMKEI 1688
            ++               VGENY+LNQSAK+AYRSY+L+YNSH+MK+I
Sbjct: 476  EFNNKNVPNLQSHLENIVGENYFLNQSAKEAYRSYILAYNSHAMKDI 522



 Score = 58.2 bits (139), Expect(2) = 0.0
 Identities = 33/46 (71%), Positives = 37/46 (80%), Gaps = 3/46 (6%)
 Frame = +2

Query: 1766 LNLESSASKFRKKMRKVDGS--RHGISASNPYGRKSG-DTRQFTRF 1894
            L+LESSASK R+K RKVDG   RHGI+A+NPYGRK G D RQF RF
Sbjct: 547  LDLESSASK-RRKTRKVDGGARRHGINAANPYGRKGGDDNRQFARF 591


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