BLASTX nr result
ID: Dioscorea21_contig00004092
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00004092
(1084 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 254 3e-65
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 253 8e-65
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 248 2e-63
gb|ABW74566.1| integrase [Boechera divaricarpa] 228 2e-57
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 226 1e-56
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 254 bits (649), Expect = 3e-65
Identities = 129/267 (48%), Positives = 173/267 (64%)
Frame = +1
Query: 1 KSYIEALLKQLNMLNCKPVMTPMGTNDKLHTTTGANLFYPRMYRSLIGKLLYITHSRPDI 180
K Y E LLK+ M+NC+ TPM N+KL G P+++RSL+G L Y+TH+RPDI
Sbjct: 1066 KKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDI 1125
Query: 181 SFSVSYLSRFMSAPFDLHYTAAKRVVRYLAGTREFGLLYTRDDLYALEAFSDSDWGGSLH 360
+FSVS +SRF+ +P H+ AAKRV+RY+AGT +FG+ Y++ + L F+DSD+ G L
Sbjct: 1126 AFSVSVVSRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLD 1185
Query: 361 DRKSTTGMLVRLGLSAIARSSRKQEVVXXXXXXXXXXXXXXXXCQVIWFRRLLQEFGHTF 540
DRKST+G G + SS+KQE V Q +W R+LL++F +
Sbjct: 1186 DRKSTSGSCFSFGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQ 1245
Query: 541 NRSTCIWCDNQSAIAVAKNPAHHGRTKHIDV*FHFIRGLVNDKLITLQHCSTDDQLADLF 720
ST I+ D++SAIA+AKNP+ HGRTKHIDV +HFIR LV D I L+ CST++Q AD+F
Sbjct: 1246 KESTEIFSDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAADIF 1305
Query: 721 TKPLPGEKHAAMRSLIGVQDLQSRGSV 801
TK LP KH R +GV D +SRGSV
Sbjct: 1306 TKSLPQAKHEYFRLQLGVCDFESRGSV 1332
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 253 bits (645), Expect = 8e-65
Identities = 125/267 (46%), Positives = 171/267 (64%)
Frame = +1
Query: 1 KSYIEALLKQLNMLNCKPVMTPMGTNDKLHTTTGANLFYPRMYRSLIGKLLYITHSRPDI 180
+ Y LLK+ NMLNCK V TPM +N+KL G R +RSL+G L+Y+TH+RPDI
Sbjct: 1006 RKYAVDLLKKFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDI 1065
Query: 181 SFSVSYLSRFMSAPFDLHYTAAKRVVRYLAGTREFGLLYTRDDLYALEAFSDSDWGGSLH 360
+F+V +SRFM P H AAKR++RY+AGT +FG+ Y + L ++DSDW G L
Sbjct: 1066 AFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLE 1125
Query: 361 DRKSTTGMLVRLGLSAIARSSRKQEVVXXXXXXXXXXXXXXXXCQVIWFRRLLQEFGHTF 540
DRKS +G + LG A+ SS+KQ V CQ +W RR+L +
Sbjct: 1126 DRKSXSGYMFSLGSGAVCWSSKKQAVTALSSXEAEYTAATSSXCQAVWLRRILADINQEH 1185
Query: 541 NRSTCIWCDNQSAIAVAKNPAHHGRTKHIDV*FHFIRGLVNDKLITLQHCSTDDQLADLF 720
T I+CDN++AIA+ KNPA+HGRTKH+D+ HFIR LV + + LQ+C+T++Q+AD+
Sbjct: 1186 EEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVL 1245
Query: 721 TKPLPGEKHAAMRSLIGVQDLQSRGSV 801
TK L +KH RS +GV + +SRGSV
Sbjct: 1246 TKALSRDKHVYFRSKLGVCNFESRGSV 1272
>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 248 bits (633), Expect = 2e-63
Identities = 121/267 (45%), Positives = 168/267 (62%)
Frame = +1
Query: 1 KSYIEALLKQLNMLNCKPVMTPMGTNDKLHTTTGANLFYPRMYRSLIGKLLYITHSRPDI 180
+ Y LLK+ NMLNCK V TPM +N+KL G R +RSL+G L+Y+TH+RPD
Sbjct: 915 RKYAVDLLKKFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDX 974
Query: 181 SFSVSYLSRFMSAPFDLHYTAAKRVVRYLAGTREFGLLYTRDDLYALEAFSDSDWGGSLH 360
+F+V +SRFM P H AAKR++RY+AGT +F + Y + L ++DSDW G L
Sbjct: 975 AFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGCLE 1034
Query: 361 DRKSTTGMLVRLGLSAIARSSRKQEVVXXXXXXXXXXXXXXXXCQVIWFRRLLQEFGHTF 540
DRKST+G + LG A+ SS+KQ V CQ +W RR+L +
Sbjct: 1035 DRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRILVDINQEH 1094
Query: 541 NRSTCIWCDNQSAIAVAKNPAHHGRTKHIDV*FHFIRGLVNDKLITLQHCSTDDQLADLF 720
T I+CDN++AIA+ KNPA+HGRTKH+++ HFIR LV + + LQ+C+T++Q+AD+
Sbjct: 1095 EEXTVIYCDNKAAIAMTKNPAYHGRTKHVBIRVHFIRDLVVEGXVVLQYCNTNEQVADVR 1154
Query: 721 TKPLPGEKHAAMRSLIGVQDLQSRGSV 801
TK L +KH RS +GV + +SRGSV
Sbjct: 1155 TKALSRDKHVYFRSKLGVCNFESRGSV 1181
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 228 bits (581), Expect = 2e-57
Identities = 116/261 (44%), Positives = 159/261 (60%)
Frame = +1
Query: 19 LLKQLNMLNCKPVMTPMGTNDKLHTTTGANLFYPRMYRSLIGKLLYITHSRPDISFSVSY 198
LLK+ +M C V TPM N+KL G +RSL+G L+Y+TH+RPDI F+VS
Sbjct: 903 LLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDICFAVSA 962
Query: 199 LSRFMSAPFDLHYTAAKRVVRYLAGTREFGLLYTRDDLYALEAFSDSDWGGSLHDRKSTT 378
+SRFM P H+ AAKR++RY+A T E+GL Y + L F+DSDW G + DRKST+
Sbjct: 963 ISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWYCSVSKFKLVGFTDSDWAGCVQDRKSTS 1022
Query: 379 GMLVRLGLSAIARSSRKQEVVXXXXXXXXXXXXXXXXCQVIWFRRLLQEFGHTFNRSTCI 558
G + LG A+ SS+KQ V CQ +W RR+L + ++T I
Sbjct: 1023 GHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATAAACQAVWLRRILADIKQEQEKATTI 1082
Query: 559 WCDNQSAIAVAKNPAHHGRTKHIDV*FHFIRGLVNDKLITLQHCSTDDQLADLFTKPLPG 738
+CDN++ IA+ KNPA+HGRTKHI + HFIR LV++ +TL++CST++Q AD+ TK L
Sbjct: 1083 FCDNKATIAMNKNPAYHGRTKHISIKVHFIRDLVSEGSVTLEYCSTNEQSADVLTKALSR 1142
Query: 739 EKHAAMRSLIGVQDLQSRGSV 801
K RS +GV +S SV
Sbjct: 1143 NKFDYFRSKLGVCKFESMESV 1163
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 226 bits (575), Expect = 1e-56
Identities = 116/269 (43%), Positives = 162/269 (60%), Gaps = 2/269 (0%)
Frame = +1
Query: 1 KSYIEALLKQLNMLNCKPVMTPMGTNDKLHTTTGANLFYPRMYRSLIGKLLYITHSRPDI 180
+ Y LLK+ NMLNCK V PM +N+KL G R +RSL+G L+Y+TH+RPDI
Sbjct: 1166 RKYAVDLLKKFNMLNCKVVAIPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDI 1225
Query: 181 SFSVSYLSRFMSAPFDLHYTAAKRVVRYLAGTREFGLLYTRDDLYALEAFSDSDWGGSLH 360
+F+V +SRFM P H A KR++RY+AGT +F + + L ++DSDW G L
Sbjct: 1226 AFAVGVISRFMHCPSKQHLGATKRLLRYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLE 1285
Query: 361 DRKSTTGMLVRLGLS--AIARSSRKQEVVXXXXXXXXXXXXXXXXCQVIWFRRLLQEFGH 534
DRKST+G + LG + +A SS CQ +W RR+L +
Sbjct: 1286 DRKSTSGYMFSLGSAEYTVATSS---------------------ACQAVWLRRILADINQ 1324
Query: 535 TFNRSTCIWCDNQSAIAVAKNPAHHGRTKHIDV*FHFIRGLVNDKLITLQHCSTDDQLAD 714
T I+CDN++AIA+ KNPA+HGRTKH+D+ HFIR LV + + LQ+C+T++Q+AD
Sbjct: 1325 EHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVAD 1384
Query: 715 LFTKPLPGEKHAAMRSLIGVQDLQSRGSV 801
+ TK L +KH RS +GV + +SR SV
Sbjct: 1385 VLTKALSRDKHVYFRSKLGVCNFESRRSV 1413
Score = 100 bits (250), Expect = 5e-19
Identities = 54/143 (37%), Positives = 74/143 (51%)
Frame = +1
Query: 232 HYTAAKRVVRYLAGTREFGLLYTRDDLYALEAFSDSDWGGSLHDRKSTTGMLVRLGLSAI 411
H AA R++RY+AGT +F + Y + L ++DSDW G +
Sbjct: 8 HLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGX------------------V 49
Query: 412 ARSSRKQEVVXXXXXXXXXXXXXXXXCQVIWFRRLLQEFGHTFNRSTCIWCDNQSAIAVA 591
S+KQ V CQ +W RR+L + T I+CDN++AIA+
Sbjct: 50 CWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDNKAAIAMT 109
Query: 592 KNPAHHGRTKHIDV*FHFIRGLV 660
KNPA+HGRTKH+D+ HFIR LV
Sbjct: 110 KNPAYHGRTKHVDIRVHFIRDLV 132