BLASTX nr result

ID: Dioscorea21_contig00004036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004036
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK03238.1| predicted protein [Hordeum vulgare subsp. vulgare]     67   1e-09
dbj|BAD25211.1| putative Hcr2-5B [Oryza sativa Japonica Group]         62   6e-08
ref|XP_002330548.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002299054.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
gb|EEE56354.1| hypothetical protein OsJ_05477 [Oryza sativa Japo...    62   6e-08

>dbj|BAK03238.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 881

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
 Frame = +1

Query: 187 CHAKT---EAEALLNWKSSLNNPDSLNSWNPTNSTDHCKWFGVTCNLAGSIVELNLPN 351
           C AK    EAEALL WKS+L  P ++ SW+  NST  C WFGVTC+ AG + ELNLPN
Sbjct: 16  CTAKAMNPEAEALLRWKSTLVGPGAVYSWSIANST--CSWFGVTCDAAGHVSELNLPN 71


>dbj|BAD25211.1| putative Hcr2-5B [Oryza sativa Japonica Group]
          Length = 754

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +1

Query: 193 AKTEAEALLNWKSSL-NNPDSLNSWNPTNSTDHCKWFGVTCNLAGSIVELNL 345
           A+TEAEALL WKS+L +  +SL+SW+  NST  C WFGVTC+ AG + EL+L
Sbjct: 30  AETEAEALLRWKSTLIDATNSLSSWSIANST--CSWFGVTCDAAGHVTELDL 79


>ref|XP_002330548.1| predicted protein [Populus trichocarpa] gi|222872106|gb|EEF09237.1|
           predicted protein [Populus trichocarpa]
          Length = 1093

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/49 (59%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = +1

Query: 202 EAEALLNWKSSLN-NPDSLNSWNPTNSTDHCKWFGVTCNLAGSIVELNL 345
           + +ALL WK+SLN + D LNSWNP +S+  CKWFGV CN  G+I+E+NL
Sbjct: 37  QGQALLAWKNSLNTSTDVLNSWNPLDSSP-CKWFGVHCNSDGNIIEINL 84


>ref|XP_002299054.1| predicted protein [Populus trichocarpa] gi|222846312|gb|EEE83859.1|
           predicted protein [Populus trichocarpa]
          Length = 1095

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/49 (59%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = +1

Query: 202 EAEALLNWKSSLN-NPDSLNSWNPTNSTDHCKWFGVTCNLAGSIVELNL 345
           + +ALL WK+SLN + D LNSWNP +S+  CKWFGV CN  G+I+E+NL
Sbjct: 37  QGQALLAWKNSLNTSTDVLNSWNPLDSSP-CKWFGVHCNSNGNIIEINL 84


>gb|EEE56354.1| hypothetical protein OsJ_05477 [Oryza sativa Japonica Group]
          Length = 809

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +1

Query: 193 AKTEAEALLNWKSSL-NNPDSLNSWNPTNSTDHCKWFGVTCNLAGSIVELNL 345
           A+TEAEALL WKS+L +  +SL+SW+  NST  C WFGVTC+ AG + EL+L
Sbjct: 22  AETEAEALLRWKSTLIDATNSLSSWSIANST--CSWFGVTCDAAGHVTELDL 71


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