BLASTX nr result

ID: Dioscorea21_contig00004023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004023
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285194.1| PREDICTED: serine/threonine-protein phosphat...    62   4e-08
ref|XP_002529943.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
ref|XP_003540184.1| PREDICTED: serine/threonine-protein phosphat...    56   3e-06
ref|XP_003540757.1| PREDICTED: serine/threonine-protein phosphat...    55   6e-06

>ref|XP_002285194.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit
            3-like [Vitis vinifera]
          Length = 850

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 28/150 (18%)
 Frame = +1

Query: 1    VSTSALDKLEEIDLNGTES--HNSSKGEVLMSD----------------------NGLPS 108
            VSTS  + ++E++LNGT +  ++SS  EV++ +                      NG  S
Sbjct: 597  VSTSPAEMMDEVNLNGTTNGGNSSSDDEVVVGEDEELAESKDSINGTSISNIDFLNGFNS 656

Query: 109  LPSMNGLTCPAVSGGGAPVDLEPFQFETRGNDDLFNDANVPDWVGWRGPSDILVDG---- 276
              SMNG+         A  DL  FQFET  NDD+F D  +P+WVGW   +D+ V G    
Sbjct: 657  --SMNGVINTQNEKPSASGDLSFFQFETTDNDDMFGDRPLPEWVGWGESADLQVGGSSLN 714

Query: 277  PTEDCSFPADTVVSVTNGSPMSISESSAEG 366
            P ED +   D    +     +    SS+ G
Sbjct: 715  PFEDENGDTDVTHPIPAEEAVLNVNSSSHG 744


>ref|XP_002529943.1| conserved hypothetical protein [Ricinus communis]
           gi|223530573|gb|EEF32451.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 845

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 19/115 (16%)
 Frame = +1

Query: 1   VSTSALDKLEEIDLNGTES--HNSSKGEVLMSDN-------------GLPSLPSMNGLTC 135
           VSTS  + ++EI+LNG  +  ++SS  EV++ ++                S    NG   
Sbjct: 599 VSTSPAEMMDEINLNGNANGGNSSSDDEVVVGEDDELTENKHSVNPASTSSTNIANGFPI 658

Query: 136 PAVSGGGAPVDLEPFQFETRGNDDLFNDANVPDWVGWRGPSDILVDG----PTED 288
           P       P D+  F+F+T  N+DLF D   P+WVGW   SD+ + G    P ED
Sbjct: 659 PQSEKTTTPNDIGFFRFDTPDNEDLFGDRPFPEWVGWGESSDLQIGGSSANPFED 713


>ref|XP_003540184.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit
            3-like [Glycine max]
          Length = 853

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
 Frame = +1

Query: 7    TSALDKLEEIDLNGTESH-NSSKGEVLMSD---------------------NGLPSLPSM 120
            T++ + ++EI+LNG  +  NSS  EV++ +                     NG+    SM
Sbjct: 601  TTSSEMMDEINLNGAANGGNSSDDEVVVGEDEELDESKNNLNGTSSSSTNLNGITGSDSM 660

Query: 121  NGLTCPAVSGG-GAPVDLEPFQFETRGNDDLFNDANVPDWVGWRGPSDILVDGPTEDCSF 297
            NG T    S    A  D+  F+FE   N++LF D  +PDWVGW  PSD+   G +++   
Sbjct: 661  NGDTLNFESKKTSASHDMGFFRFEASDNEELFGDRPLPDWVGWGEPSDMQDAGSSKNPFI 720

Query: 298  PADTVVSVTNGSPMSISESSAEGATDEP 381
              D     ++GS +  ++   +  T  P
Sbjct: 721  DHDD----SSGSNLCTTKPQIDSPTPSP 744


>ref|XP_003540757.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit
            3-like [Glycine max]
          Length = 848

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
 Frame = +1

Query: 7    TSALDKLEEIDLNGTESH--NSSKGEVLMSDN----------------------GLPSLP 114
            TS+ + ++EI LN   +   NSS  EV++ ++                      GL +  
Sbjct: 601  TSSSEMMDEIKLNAVANSGSNSSDDEVVVGEDEELADSKNTVNGTSSLSADFFSGLTASD 660

Query: 115  SMNGLTCPAVSGGGAPV-DLEPFQFETRGNDDLFNDANVPDWVGWRGPSDILVDGPTEDC 291
            SMNG T    S   +P  D+  F+FE   N+DLF D  +PDWVGW  PS++   G + + 
Sbjct: 661  SMNGGTLNFESEKTSPSNDMGFFRFEAPDNEDLFGDRPLPDWVGWGEPSEMQDAGSSMNP 720

Query: 292  SFPADTVVSVTNGSPMSISESSAE 363
                D       GSP   S S+ E
Sbjct: 721  FLDNDESGRPQVGSPNLSSPSNGE 744


Top