BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004021
         (1180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...   297   4e-78
emb|CBI17841.3| unnamed protein product [Vitis vinifera]              294   3e-77
ref|NP_001047510.1| Os02g0633400 [Oryza sativa Japonica Group] g...   287   3e-75
gb|EEC73654.1| hypothetical protein OsI_08182 [Oryza sativa Indi...   281   2e-73
ref|XP_003575423.1| PREDICTED: replication factor A protein 2-li...   266   1e-68

>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score =  297 bits (760), Expect = 4e-78
 Identities = 159/281 (56%), Positives = 199/281 (70%), Gaps = 3/281 (1%)
 Frame = -1

Query: 1129 MHSIQQDGGAALFSGGGFMPSQATQTPESGFS--KSRGVQGVIPLTVKQISEAYHSNDDK 956
            M+S  Q  G A FSGGGFMPSQATQ  E GFS  ++R  Q ++PLTVKQISEA+ S+DDK
Sbjct: 1    MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60

Query: 955  SNFVVDGVEASNVRLLGLVMNKAERVTDVTFTLDDGTGRIDVNRWVNETSDTNEMAIIQN 776
            SNF++DGVE +NV L+G+V NKAERVTDV F LDDGTGRID NRWVNE  DT EM  I +
Sbjct: 61   SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120

Query: 775  GMYVIVNGSLKGFQGKKHVVAFSVRPVVDFNHITLHFIECIHVHLDNTRPKGAGLPQAQ- 599
            GMYV V+G LKGFQGK+H+  FS+RPV DFN I  HFIECI+VH+ NT+ +  G  Q+  
Sbjct: 121  GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRAGGPTQSHV 180

Query: 598  TSSMVQTPIRSDVKEYHSSLSNQFSSPTGAKGSETDIYKLVLDVFQEPASLARDHGLHVD 419
            T+  + TP+    K Y +S  NQFS   GA     D  +LV+D  Q+P SLARD G+  D
Sbjct: 181  TNPAIGTPL----KGYQASQPNQFSGQYGAGLKGVD--QLVIDYLQQPQSLARDQGVGRD 234

Query: 418  EVVQKLGIPINKIRDAIEYHVDVGHIYSTIDDNHFKSACNG 296
            E+ Q+L +P++KI ++I    + G IYSTID+ H+KS  NG
Sbjct: 235  ELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 275


>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  294 bits (753), Expect = 3e-77
 Identities = 162/282 (57%), Positives = 200/282 (70%), Gaps = 4/282 (1%)
 Frame = -1

Query: 1129 MHSIQQDGGAALFSGGGFMPSQATQTPESGFS--KSRGVQGVIPLTVKQISEAYHSNDDK 956
            M+S  Q  G A FSGGGFMPSQATQ  E GFS  ++R  Q ++PLTVKQISEA+ S+DDK
Sbjct: 1    MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60

Query: 955  SNFVVDGVEASNVRLLGLVMNKAERVTDVTFTLDDGTGRIDVNRWVNETSDTNEMAIIQN 776
            SNF++DGVE +NV L+G+V NKAERVTDV F LDDGTGRID NRWVNE  DT EM  I +
Sbjct: 61   SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120

Query: 775  GMYVIVNGSLKGFQGKKHVVAFSVRPVVDFNHITLHFIECIHVHLDNTRPK-GAGLPQAQ 599
            GMYV V+G LKGFQGK+H+  FS+RPV DFN I  HFIECI+VH+ NT+ +  AG P   
Sbjct: 121  GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGGP--- 177

Query: 598  TSSMVQTP-IRSDVKEYHSSLSNQFSSPTGAKGSETDIYKLVLDVFQEPASLARDHGLHV 422
            T S V  P I + +K Y +S  NQFS   GA     D  +LV+D  Q+P SLARD G+  
Sbjct: 178  TQSHVTNPAIGTPLKGYQASQPNQFSGQYGAGLKGVD--QLVIDYLQQPQSLARDQGVGR 235

Query: 421  DEVVQKLGIPINKIRDAIEYHVDVGHIYSTIDDNHFKSACNG 296
            DE+ Q+L +P++KI ++I    + G IYSTID+ H+KS  NG
Sbjct: 236  DELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 277


>ref|NP_001047510.1| Os02g0633400 [Oryza sativa Japonica Group]
            gi|49388178|dbj|BAD25304.1| putative replication protein
            A2 [Oryza sativa Japonica Group]
            gi|113537041|dbj|BAF09424.1| Os02g0633400 [Oryza sativa
            Japonica Group] gi|215707148|dbj|BAG93608.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 298

 Score =  287 bits (735), Expect = 3e-75
 Identities = 151/285 (52%), Positives = 196/285 (68%), Gaps = 13/285 (4%)
 Frame = -1

Query: 1111 DGG----AALFSGGGFMPSQATQTPES------GFSKSRGVQGVIPLTVKQISEAYHSND 962
            DGG    ++LF GGGFMPSQAT   E       GF KSR  Q ++PLTVKQI +A  +ND
Sbjct: 15   DGGGGNASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTND 74

Query: 961  DKSNFVVDGVEASNVRLLGLVMNKAERVTDVTFTLDDGTGRIDVNRWVNETSDTNEMAII 782
            DKSNF V+G+E S VRL+G ++NK +RVTDV+FTLDDGTGR+ VNRW N+++DT EMA I
Sbjct: 75   DKSNFAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADI 134

Query: 781  QNGMYVIVNGSLKGFQGKKHVVAFSVRPVVDFNHITLHFIECIHVHLDNTRPKGAGLPQA 602
            QNG YVIVNG LKGFQGK+ VVA+SVR + +FN +T HF+ C+HVHL+ TRPK       
Sbjct: 135  QNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANT 194

Query: 601  QTSSMVQTPIRSDVKEYHSSLSNQ---FSSPTGAKGSETDIYKLVLDVFQEPASLARDHG 431
             T +  QT  R  +    S L+NQ   FS+P    G+ T++  LVL+VF +PA +  DHG
Sbjct: 195  ATGTPNQTMPRDSMAYNQSPLTNQASTFSAPQNT-GTGTNMIDLVLNVFHDPAVMNDDHG 253

Query: 430  LHVDEVVQKLGIPINKIRDAIEYHVDVGHIYSTIDDNHFKSACNG 296
            + VD V ++L +P   +   I   VD+GH+Y+TIDD+H+KS  NG
Sbjct: 254  VGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYKSTMNG 298


>gb|EEC73654.1| hypothetical protein OsI_08182 [Oryza sativa Indica Group]
          Length = 300

 Score =  281 bits (720), Expect = 2e-73
 Identities = 151/289 (52%), Positives = 196/289 (67%), Gaps = 17/289 (5%)
 Frame = -1

Query: 1111 DGG----AALFSGGGFMPSQATQTPES------GFSKSRGVQGVIPLTVKQISEAYHSND 962
            DGG    ++LF GGGFMPSQAT   E       GF KSR  Q ++PLTVKQI +A  +ND
Sbjct: 13   DGGGGNASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTND 72

Query: 961  DKSNFVVDGVEASNVRLLGLVMNKAERVTDVTFTLDDGTGRIDVNRW----VNETSDTNE 794
            DKSNF V+G+E S VRL+G ++NK +RVTDV+FTLDDGTGR+ VNRW     N+++DT E
Sbjct: 73   DKSNFAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWWDAMENDSTDTKE 132

Query: 793  MAIIQNGMYVIVNGSLKGFQGKKHVVAFSVRPVVDFNHITLHFIECIHVHLDNTRPKGAG 614
            MA IQNG YVIVNG LKGFQGK+ VVA+SVR + +FN +T HF+ C+HVHL+ TRPK   
Sbjct: 133  MADIQNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQV 192

Query: 613  LPQAQTSSMVQTPIRSDVKEYHSSLSNQ---FSSPTGAKGSETDIYKLVLDVFQEPASLA 443
                 T +  QT  R  +    S L+NQ   FS+P    G+ T++  LVL+VF +PA + 
Sbjct: 193  NANTATGTPNQTMPRDSMAYNQSPLTNQASTFSAPQNT-GTGTNMIDLVLNVFHDPAVMN 251

Query: 442  RDHGLHVDEVVQKLGIPINKIRDAIEYHVDVGHIYSTIDDNHFKSACNG 296
             DHG+ VD V ++L +P   +   I   VD+GH+Y+TIDD+H+KS  NG
Sbjct: 252  DDHGVGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYKSTMNG 300


>ref|XP_003575423.1| PREDICTED: replication factor A protein 2-like [Brachypodium
            distachyon]
          Length = 297

 Score =  266 bits (679), Expect = 1e-68
 Identities = 140/274 (51%), Positives = 188/274 (68%), Gaps = 2/274 (0%)
 Frame = -1

Query: 1111 DGGAALFSGGGFMPSQATQTPE--SGFSKSRGVQGVIPLTVKQISEAYHSNDDKSNFVVD 938
            D  + LFSGGGFMPSQAT TPE  S F ++R  Q ++P+TVKQ+ +A   NDD+S+F V+
Sbjct: 35   DNSSTLFSGGGFMPSQATNTPEGSSSFPRTRNAQTLLPVTVKQLMDACQINDDRSSFAVN 94

Query: 937  GVEASNVRLLGLVMNKAERVTDVTFTLDDGTGRIDVNRWVNETSDTNEMAIIQNGMYVIV 758
            G E S VRL+G ++NK ERVTDV+F LDD TGRIDVNRW NETSDTNEM  ++NG YVIV
Sbjct: 95   GTELSTVRLVGRMLNKTERVTDVSFILDDCTGRIDVNRWENETSDTNEMNEVKNGDYVIV 154

Query: 757  NGSLKGFQGKKHVVAFSVRPVVDFNHITLHFIECIHVHLDNTRPKGAGLPQAQTSSMVQT 578
            NG LKGFQGK+HV A+SVR V ++N IT HF+ CI+VHLD ++ K      A+T ++ Q 
Sbjct: 155  NGCLKGFQGKRHVNAYSVRLVTNYNDITHHFLYCIYVHLDLSKSKRQ--LNAKTGTLNQA 212

Query: 577  PIRSDVKEYHSSLSNQFSSPTGAKGSETDIYKLVLDVFQEPASLARDHGLHVDEVVQKLG 398
            P+ ++     S+  N     TG     T++ KLV+ VF +P  +  +HG+ V +V  +L 
Sbjct: 213  PVPNNQAPTSSASGNS----TG-----TELSKLVMSVFHDPVLINVEHGVSVQQVADRLK 263

Query: 397  IPINKIRDAIEYHVDVGHIYSTIDDNHFKSACNG 296
            +     R  ++  VD+G++YSTIDDNH+KS  NG
Sbjct: 264  LSEELARSTVQELVDLGNLYSTIDDNHYKSTLNG 297