BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003948
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding pro...   199   2e-49
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g...   199   2e-49
gb|AEL98962.1| chloroplast stem-loop binding protein, partial [S...   198   3e-49
ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140...   197   6e-49
ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140...   197   7e-49

>ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Cucumis sativus]
          Length = 409

 Score =  199 bits (507), Expect = 2e-49
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = -2

Query: 350 NTNSGGHAVIGFYLARDLLTSGHEVTILTVGDASSDKMKKPPFNRFSELVSAGGETVWGD 171
           NTNSGGHAVIGFY A+ LL SGHEVTILTVG+ SSDKM KPPFNRFSE+VS GG+TVWGD
Sbjct: 89  NTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGD 148

Query: 170 PAEVGNILGSAVFDVVLDNNGKDLDTVKPVVDWAKSSGASQFLFISSAGIYKTSDE 3
           PAE+G ++  A FDVVLDNNGKD+DTV+PV+DWAKSSG  QFLFISSAGIYKT+DE
Sbjct: 149 PAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFISSAGIYKTTDE 204


>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
           gi|355479697|gb|AES60900.1| MRNA-binding protein
           [Medicago truncatula]
          Length = 401

 Score =  199 bits (507), Expect = 2e-49
 Identities = 92/116 (79%), Positives = 107/116 (92%)
 Frame = -2

Query: 350 NTNSGGHAVIGFYLARDLLTSGHEVTILTVGDASSDKMKKPPFNRFSELVSAGGETVWGD 171
           NTNSGGHAVIGFY A++LL +GH VTILTVGD SSDKMKKPPFNRFSE+VSAGG TVWG+
Sbjct: 81  NTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIVSAGGSTVWGN 140

Query: 170 PAEVGNILGSAVFDVVLDNNGKDLDTVKPVVDWAKSSGASQFLFISSAGIYKTSDE 3
           PA+VG+++G   FDVVLDNNGKDL++V+PV+DWAKS+GA QFLFISSAGIYKT+DE
Sbjct: 141 PADVGSVVGGEAFDVVLDNNGKDLESVRPVIDWAKSAGAKQFLFISSAGIYKTTDE 196


>gb|AEL98962.1| chloroplast stem-loop binding protein, partial [Silene latifolia]
          Length = 384

 Score =  198 bits (504), Expect = 3e-49
 Identities = 92/116 (79%), Positives = 104/116 (89%)
 Frame = -2

Query: 350 NTNSGGHAVIGFYLARDLLTSGHEVTILTVGDASSDKMKKPPFNRFSELVSAGGETVWGD 171
           NTNSGGHAVIGFY A++LL SGH+VT+ TVGD SSDKMKKPPFNRFSE+ SAGG+TVWG+
Sbjct: 65  NTNSGGHAVIGFYFAKELLASGHQVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGN 124

Query: 170 PAEVGNILGSAVFDVVLDNNGKDLDTVKPVVDWAKSSGASQFLFISSAGIYKTSDE 3
           PAEVG ++G   FDVVLDNNGKDL+TV+PVVDWAKSSG  QFLFISSAGIYK +DE
Sbjct: 125 PAEVGKVVGEESFDVVLDNNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDE 180


>ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
           vinifera] gi|147789789|emb|CAN73874.1| hypothetical
           protein VITISV_039540 [Vitis vinifera]
          Length = 397

 Score =  197 bits (502), Expect = 6e-49
 Identities = 92/116 (79%), Positives = 104/116 (89%)
 Frame = -2

Query: 350 NTNSGGHAVIGFYLARDLLTSGHEVTILTVGDASSDKMKKPPFNRFSELVSAGGETVWGD 171
           NTNSGGHAVIGFY A+ LL SGHEVTI+TVG+ +SDKMKKPPF+RFSE+ SAGG+TVWGD
Sbjct: 77  NTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEENSDKMKKPPFSRFSEITSAGGKTVWGD 136

Query: 170 PAEVGNILGSAVFDVVLDNNGKDLDTVKPVVDWAKSSGASQFLFISSAGIYKTSDE 3
           PAEVG ++  A FDVVLDNNGKD+DTV+PVVDWAKSSG  QFLFISSAGIYK +DE
Sbjct: 137 PAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDWAKSSGVEQFLFISSAGIYKPTDE 192


>ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
           [Glycine max]
          Length = 403

 Score =  197 bits (501), Expect = 7e-49
 Identities = 90/116 (77%), Positives = 105/116 (90%)
 Frame = -2

Query: 350 NTNSGGHAVIGFYLARDLLTSGHEVTILTVGDASSDKMKKPPFNRFSELVSAGGETVWGD 171
           NTNSGGHA+IGFY A++LL +GH VTILTVG+  SDKMKKPPFNRFSE+VSAGG TVWG+
Sbjct: 83  NTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVSAGGRTVWGN 142

Query: 170 PAEVGNILGSAVFDVVLDNNGKDLDTVKPVVDWAKSSGASQFLFISSAGIYKTSDE 3
           PAEVG+++G  VFDVVLDNNGKDL+TV+PV+DWAKSSG  QFLF+SSAGIYK +DE
Sbjct: 143 PAEVGSVVGGEVFDVVLDNNGKDLETVRPVIDWAKSSGVKQFLFVSSAGIYKPTDE 198