BLASTX nr result

ID: Dioscorea21_contig00003890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003890
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136220.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...   242   1e-61
gb|AFW82511.1| hypothetical protein ZEAMMB73_250734 [Zea mays] g...   240   6e-61
dbj|BAK05937.1| predicted protein [Hordeum vulgare subsp. vulgare]    239   1e-60
ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase ...   237   4e-60
ref|XP_002441401.1| hypothetical protein SORBIDRAFT_09g025940 [S...   237   5e-60

>ref|XP_004136220.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis
           sativus] gi|449517243|ref|XP_004165655.1| PREDICTED:
           peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis
           sativus]
          Length = 192

 Score =  242 bits (618), Expect = 1e-61
 Identities = 121/173 (69%), Positives = 146/173 (84%), Gaps = 3/173 (1%)
 Frame = +1

Query: 73  WLARGLKPENFVPGLVIGFLMGLFLDLSTSYRGHSLKGRTLS---KQLKTASDGGGEELK 243
           WL+   KPENF+PGLVIGF++GLFLDLS   +G++ KG  L    +QL  AS+ G +ELK
Sbjct: 20  WLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPSKYQQLSPASNNGDQELK 79

Query: 244 MVLVVRQDLKMGAGKIASQCAHAATGMYADLLQSHRSLLRQWENSGQAKIVLSCKNQQEM 423
           +VLVVRQDLKMG+GKIASQCAHAATG+YA+L+QSHR+LLRQWE  GQ KIV++CKNQ EM
Sbjct: 80  LVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQHEM 139

Query: 424 NKLKEAADRCGLPTFVVADAGRTQILAGSRTVLAIGPGRKSLIDSVTGKLRLL 582
           NKLK++A+  GLPTFVVADAGRTQ+ AGS+TVLAIGPG K  ID+V+GKLRLL
Sbjct: 140 NKLKDSAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAIDAVSGKLRLL 192


>gb|AFW82511.1| hypothetical protein ZEAMMB73_250734 [Zea mays]
           gi|413949863|gb|AFW82512.1| hypothetical protein
           ZEAMMB73_250734 [Zea mays]
          Length = 202

 Score =  240 bits (612), Expect = 6e-61
 Identities = 124/180 (68%), Positives = 144/180 (80%), Gaps = 10/180 (5%)
 Frame = +1

Query: 73  WLARGLKPENFVPGLVIGFLMGLFLDLSTSYRGHS----------LKGRTLSKQLKTASD 222
           WLA  L+P NF+PGL IGFL+GL LDLS+S+R  S           +  +  +   T+  
Sbjct: 23  WLAASLRPANFLPGLAIGFLLGLLLDLSSSWRPKSSPAPAPAAAPARASSSKRASGTSFA 82

Query: 223 GGGEELKMVLVVRQDLKMGAGKIASQCAHAATGMYADLLQSHRSLLRQWENSGQAKIVLS 402
            GGEELKMVLVVRQDLKMGAGKIASQCAHAATG+YA+LL S+R LLRQWE  GQAKIVL+
Sbjct: 83  SGGEELKMVLVVRQDLKMGAGKIASQCAHAATGLYAELLSSNRGLLRQWEQLGQAKIVLT 142

Query: 403 CKNQQEMNKLKEAADRCGLPTFVVADAGRTQILAGSRTVLAIGPGRKSLIDSVTGKLRLL 582
           CKNQQEMN+LKE A+  G+PTF+VADAGRTQ+LAGS+TVLAIGPGRK+ IDSVTGKLRLL
Sbjct: 143 CKNQQEMNRLKETAEHRGIPTFIVADAGRTQVLAGSKTVLAIGPGRKADIDSVTGKLRLL 202


>dbj|BAK05937.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 200

 Score =  239 bits (609), Expect = 1e-60
 Identities = 125/180 (69%), Positives = 145/180 (80%), Gaps = 10/180 (5%)
 Frame = +1

Query: 73  WLARGLKPENFVPGLVIGFLMGLFLDLSTSYR-------GHSLKGRTLSKQLKTASDGG- 228
           WLA GL+P NF+PGL IGFL+GL LDLS+S+R       G S   +  SK+    S    
Sbjct: 21  WLAAGLRPANFLPGLAIGFLLGLLLDLSSSWRPRFSLPPGPSAPAQRGSKRAAAGSSAAP 80

Query: 229 --GEELKMVLVVRQDLKMGAGKIASQCAHAATGMYADLLQSHRSLLRQWENSGQAKIVLS 402
             GEELKMVLVVRQDLKMGAGKIASQCAHAATG+YADLL S+R LLRQWE  GQAKIVL+
Sbjct: 81  APGEELKMVLVVRQDLKMGAGKIASQCAHAATGLYADLLASNRVLLRQWEQFGQAKIVLT 140

Query: 403 CKNQQEMNKLKEAADRCGLPTFVVADAGRTQILAGSRTVLAIGPGRKSLIDSVTGKLRLL 582
           CKNQQEMN++KE A+  G+PTF+VADAGRTQ++AGS+TVLA+GPGRK+ IDSVTGKLRLL
Sbjct: 141 CKNQQEMNRIKETAEYQGIPTFIVADAGRTQVVAGSKTVLAVGPGRKADIDSVTGKLRLL 200


>ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase 2-like [Vitis vinifera]
           gi|296081837|emb|CBI20842.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  237 bits (605), Expect = 4e-60
 Identities = 120/174 (68%), Positives = 138/174 (79%), Gaps = 4/174 (2%)
 Frame = +1

Query: 73  WLARGLKPENFVPGLVIGFLMGLFLDLSTSYRGHSLKGRTL----SKQLKTASDGGGEEL 240
           W A   KPENF+PGL+IGF+ G FLDLS   +       +L     +Q +  S    EEL
Sbjct: 20  WFAVNFKPENFIPGLIIGFIFGFFLDLSKVPKNQPRHNNSLLGKRQQQQQLVSSNSDEEL 79

Query: 241 KMVLVVRQDLKMGAGKIASQCAHAATGMYADLLQSHRSLLRQWENSGQAKIVLSCKNQQE 420
           KMVLVVRQDLKMG GKIASQCAHAATGMYA+L+QS RSLLRQWE  GQAKIV++CKNQQE
Sbjct: 80  KMVLVVRQDLKMGTGKIASQCAHAATGMYAELVQSQRSLLRQWEQCGQAKIVVTCKNQQE 139

Query: 421 MNKLKEAADRCGLPTFVVADAGRTQILAGSRTVLAIGPGRKSLIDSVTGKLRLL 582
           MNKLKEAA+  GLPTFVVADAGRTQ+L+GS+TVLAIGPGRK+ +DS+TGK RLL
Sbjct: 140 MNKLKEAAESIGLPTFVVADAGRTQVLSGSKTVLAIGPGRKASVDSITGKQRLL 193


>ref|XP_002441401.1| hypothetical protein SORBIDRAFT_09g025940 [Sorghum bicolor]
           gi|241946686|gb|EES19831.1| hypothetical protein
           SORBIDRAFT_09g025940 [Sorghum bicolor]
          Length = 201

 Score =  237 bits (604), Expect = 5e-60
 Identities = 121/180 (67%), Positives = 144/180 (80%), Gaps = 10/180 (5%)
 Frame = +1

Query: 73  WLARGLKPENFVPGLVIGFLMGLFLDLSTSYR----------GHSLKGRTLSKQLKTASD 222
           WLA  L+P NF+PGL IGFL+G+ LDLS+S+R            S +G +  +   ++  
Sbjct: 22  WLAASLRPANFLPGLAIGFLLGVLLDLSSSWRPKSSPAPAPAAASARGSSSKRASGSSFA 81

Query: 223 GGGEELKMVLVVRQDLKMGAGKIASQCAHAATGMYADLLQSHRSLLRQWENSGQAKIVLS 402
            GGEELKMVLVVRQDLKMGAGKIASQCAHAATG+Y++LL S+R LL+QWE  GQAKIVL+
Sbjct: 82  SGGEELKMVLVVRQDLKMGAGKIASQCAHAATGLYSELLSSNRGLLKQWEQLGQAKIVLT 141

Query: 403 CKNQQEMNKLKEAADRCGLPTFVVADAGRTQILAGSRTVLAIGPGRKSLIDSVTGKLRLL 582
           CKNQQEMN+LKE A   G+PTF+VADAGRTQ+LAGS+TVLAIGPGRK+ IDSVTGKLRLL
Sbjct: 142 CKNQQEMNRLKETAQHRGIPTFIVADAGRTQVLAGSKTVLAIGPGRKADIDSVTGKLRLL 201


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