BLASTX nr result

ID: Dioscorea21_contig00003596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003596
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4...   151   6e-35
emb|CBI15210.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_003523016.1| PREDICTED: chlorophyll a-b binding protein P...   148   5e-34
ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P...   148   5e-34
gb|ACB05669.1| chloroplast chlorophyll a/b binding protein [Caps...   147   7e-34

>ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|147843386|emb|CAN79984.1| hypothetical
           protein VITISV_038035 [Vitis vinifera]
          Length = 252

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/92 (77%), Positives = 81/92 (88%)
 Frame = -2

Query: 278 MASVTSQASLAVFRPCLSKSRFLTGSSGKLPREFTARTSPAITSQSFKVQAKKGEWLPGL 99
           MA+VT+QAS AVFRPC SKSRFLTGSSGKL RE + +   + + +SFKV+AKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLTGSSGKLGREVSVKPMTSSSYRSFKVEAKKGEWLPGL 60

Query: 98  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYI 3
            SP+YLDGSLPGDNGFDPLGLAEDPENLKWY+
Sbjct: 61  SSPSYLDGSLPGDNGFDPLGLAEDPENLKWYV 92


>emb|CBI15210.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/92 (79%), Positives = 81/92 (88%)
 Frame = -2

Query: 278 MASVTSQASLAVFRPCLSKSRFLTGSSGKLPREFTARTSPAITSQSFKVQAKKGEWLPGL 99
           MA+VT+QAS AVFRPC SKSRFLTGSSGKL RE + +    +TS SFKV+AKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLTGSSGKLGREVSVKP---MTSSSFKVEAKKGEWLPGL 57

Query: 98  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYI 3
            SP+YLDGSLPGDNGFDPLGLAEDPENLKWY+
Sbjct: 58  SSPSYLDGSLPGDNGFDPLGLAEDPENLKWYV 89


>ref|XP_003523016.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
           [Glycine max]
          Length = 252

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/92 (76%), Positives = 78/92 (84%)
 Frame = -2

Query: 278 MASVTSQASLAVFRPCLSKSRFLTGSSGKLPREFTARTSPAITSQSFKVQAKKGEWLPGL 99
           MA+VT+QAS A+FRPC SKSRFLTGSSGKL RE T R      S SFKV+AKKGEWLPGL
Sbjct: 1   MATVTTQASAAIFRPCTSKSRFLTGSSGKLNREVTMRPMGCPPSASFKVEAKKGEWLPGL 60

Query: 98  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYI 3
            SP YL+G+LPGDNGFDPLGLAEDPENL+WY+
Sbjct: 61  ASPTYLNGTLPGDNGFDPLGLAEDPENLRWYV 92


>ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
           [Glycine max]
          Length = 252

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/92 (76%), Positives = 78/92 (84%)
 Frame = -2

Query: 278 MASVTSQASLAVFRPCLSKSRFLTGSSGKLPREFTARTSPAITSQSFKVQAKKGEWLPGL 99
           MA+VT+QAS A+FRPC SKSRFLTGSSGKL RE T R      S SFKV+AKKGEWLPGL
Sbjct: 1   MATVTTQASAAIFRPCASKSRFLTGSSGKLNREVTMRPMGCPPSASFKVEAKKGEWLPGL 60

Query: 98  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYI 3
            SP YL+G+LPGDNGFDPLGLAEDPENL+WY+
Sbjct: 61  ASPTYLNGTLPGDNGFDPLGLAEDPENLRWYV 92


>gb|ACB05669.1| chloroplast chlorophyll a/b binding protein [Capsicum annuum]
          Length = 250

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/92 (76%), Positives = 81/92 (88%)
 Frame = -2

Query: 278 MASVTSQASLAVFRPCLSKSRFLTGSSGKLPREFTARTSPAITSQSFKVQAKKGEWLPGL 99
           MA+ T+QAS A+FRPC +++RFLTGSSGKL RE + R  P+ ++ SFKV+AKKGEWLPGL
Sbjct: 1   MATATTQASAAIFRPCATRTRFLTGSSGKLNREVSFR--PSTSNNSFKVEAKKGEWLPGL 58

Query: 98  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYI 3
            SPAYLDGSLPGDNGFDPLGLAEDPENLKWYI
Sbjct: 59  ASPAYLDGSLPGDNGFDPLGLAEDPENLKWYI 90


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