BLASTX nr result

ID: Dioscorea21_contig00003507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003507
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19511.3| unnamed protein product [Vitis vinifera]              186   1e-44
ref|XP_002284804.1| PREDICTED: THO complex subunit 5 homolog [Vi...   186   1e-44
ref|XP_002510207.1| fms interacting protein, putative [Ricinus c...   179   8e-43
gb|AFW73619.1| hypothetical protein ZEAMMB73_826118 [Zea mays]        177   3e-42
gb|AFW73617.1| hypothetical protein ZEAMMB73_826118 [Zea mays]        177   3e-42

>emb|CBI19511.3| unnamed protein product [Vitis vinifera]
          Length = 780

 Score =  186 bits (471), Expect = 1e-44
 Identities = 101/156 (64%), Positives = 121/156 (77%), Gaps = 13/156 (8%)
 Frame = -3

Query: 1075 REFLLVLTRK-DKTEQIVMLEAKVKISIEYPLRPPLFQLKL-------SGADRQGS-WHN 923
            REF LVLTRK D  E+ V LEAK+KIS+EYPLRPPLF + L       S ++ +GS W+N
Sbjct: 625  REFCLVLTRKMDANERNVKLEAKIKISMEYPLRPPLFAISLYTVSPVESDSEIEGSEWYN 684

Query: 922  ELRAMEAEVNLHILRHLPLDYENYILAHQVHCLAMLFDFQFE---SRPDKRKS-SVIDVG 755
            ELRAMEAE+NLHILR LPLD ENYILAHQV CLAMLFD+  +   S  +K KS SV+DVG
Sbjct: 685  ELRAMEAEINLHILRMLPLDQENYILAHQVCCLAMLFDYHMDEASSSSEKIKSTSVVDVG 744

Query: 754  LCEPVSGSIVSRSFRGRDRRKIISWKGLGCTLGYPY 647
            LC+PV+G +++RS RGRDRRK+ISWK + CT GYPY
Sbjct: 745  LCKPVTGRLLARSVRGRDRRKMISWKDMECTPGYPY 780


>ref|XP_002284804.1| PREDICTED: THO complex subunit 5 homolog [Vitis vinifera]
          Length = 816

 Score =  186 bits (471), Expect = 1e-44
 Identities = 101/156 (64%), Positives = 121/156 (77%), Gaps = 13/156 (8%)
 Frame = -3

Query: 1075 REFLLVLTRK-DKTEQIVMLEAKVKISIEYPLRPPLFQLKL-------SGADRQGS-WHN 923
            REF LVLTRK D  E+ V LEAK+KIS+EYPLRPPLF + L       S ++ +GS W+N
Sbjct: 661  REFCLVLTRKMDANERNVKLEAKIKISMEYPLRPPLFAISLYTVSPVESDSEIEGSEWYN 720

Query: 922  ELRAMEAEVNLHILRHLPLDYENYILAHQVHCLAMLFDFQFE---SRPDKRKS-SVIDVG 755
            ELRAMEAE+NLHILR LPLD ENYILAHQV CLAMLFD+  +   S  +K KS SV+DVG
Sbjct: 721  ELRAMEAEINLHILRMLPLDQENYILAHQVCCLAMLFDYHMDEASSSSEKIKSTSVVDVG 780

Query: 754  LCEPVSGSIVSRSFRGRDRRKIISWKGLGCTLGYPY 647
            LC+PV+G +++RS RGRDRRK+ISWK + CT GYPY
Sbjct: 781  LCKPVTGRLLARSVRGRDRRKMISWKDMECTPGYPY 816


>ref|XP_002510207.1| fms interacting protein, putative [Ricinus communis]
            gi|223550908|gb|EEF52394.1| fms interacting protein,
            putative [Ricinus communis]
          Length = 808

 Score =  179 bits (455), Expect = 8e-43
 Identities = 97/152 (63%), Positives = 115/152 (75%), Gaps = 9/152 (5%)
 Frame = -3

Query: 1075 REFLLVLTRKDKTE-QIVMLEAKVKISIEYPLRPPLFQLKL--SGADRQGS----WHNEL 917
            +EF LVLTRK   E + V LEAKVKIS EYPLRPP F + L  +G  + G+    W NEL
Sbjct: 657  KEFSLVLTRKVNAEGKSVKLEAKVKISKEYPLRPPFFAVSLYPTGEKKDGNDGSGWCNEL 716

Query: 916  RAMEAEVNLHILRHLPLDYENYILAHQVHCLAMLFDFQF--ESRPDKRKSSVIDVGLCEP 743
            RAMEAEVNLH+LR LP D ENYI+AHQV CLAMLFD+    ES  +KR +SV+DVGLC+P
Sbjct: 717  RAMEAEVNLHMLRMLPSDQENYIIAHQVRCLAMLFDYFMDEESPFEKRSTSVVDVGLCKP 776

Query: 742  VSGSIVSRSFRGRDRRKIISWKGLGCTLGYPY 647
            V G +++RSFRGRDRRK+ISWK + CT GYPY
Sbjct: 777  VIGRLLARSFRGRDRRKMISWKDMECTSGYPY 808


>gb|AFW73619.1| hypothetical protein ZEAMMB73_826118 [Zea mays]
          Length = 795

 Score =  177 bits (450), Expect = 3e-42
 Identities = 90/144 (62%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
 Frame = -3

Query: 1078 AREFLLVLTRKDKTEQIVMLEAKVKISIEYPLRPPLFQLKL-SGADRQGSWHNELRAMEA 902
            ++EF +VL++  K    VMLEAKVKIS+EYPLRPPLF+L+L S       WHN+LRAMEA
Sbjct: 651  SKEFTMVLSKTMKNGLKVMLEAKVKISMEYPLRPPLFRLRLLSEKSEILKWHNDLRAMEA 710

Query: 901  EVNLHILRHLPLDYENYILAHQVHCLAMLFDFQFESRPDKRK-SSVIDVGLCEPVSGSIV 725
            EVNLHILR +PL YE+YIL HQV CLAMLFD  F+   +KRK +SVIDVGLC+PVSG+++
Sbjct: 711  EVNLHILRSIPLSYEDYILTHQVMCLAMLFDMHFDEENEKRKVTSVIDVGLCKPVSGTML 770

Query: 724  SRSFRGRDRRKIISWKGLGCTLGY 653
            +RS RGRDRR+ I W+G  C+  Y
Sbjct: 771  TRSVRGRDRRQTIYWRGADCSSSY 794


>gb|AFW73617.1| hypothetical protein ZEAMMB73_826118 [Zea mays]
          Length = 826

 Score =  177 bits (450), Expect = 3e-42
 Identities = 90/144 (62%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
 Frame = -3

Query: 1078 AREFLLVLTRKDKTEQIVMLEAKVKISIEYPLRPPLFQLKL-SGADRQGSWHNELRAMEA 902
            ++EF +VL++  K    VMLEAKVKIS+EYPLRPPLF+L+L S       WHN+LRAMEA
Sbjct: 682  SKEFTMVLSKTMKNGLKVMLEAKVKISMEYPLRPPLFRLRLLSEKSEILKWHNDLRAMEA 741

Query: 901  EVNLHILRHLPLDYENYILAHQVHCLAMLFDFQFESRPDKRK-SSVIDVGLCEPVSGSIV 725
            EVNLHILR +PL YE+YIL HQV CLAMLFD  F+   +KRK +SVIDVGLC+PVSG+++
Sbjct: 742  EVNLHILRSIPLSYEDYILTHQVMCLAMLFDMHFDEENEKRKVTSVIDVGLCKPVSGTML 801

Query: 724  SRSFRGRDRRKIISWKGLGCTLGY 653
            +RS RGRDRR+ I W+G  C+  Y
Sbjct: 802  TRSVRGRDRRQTIYWRGADCSSSY 825


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