BLASTX nr result

ID: Dioscorea21_contig00003406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003406
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143650.1| PREDICTED: 40S ribosomal protein S20-2-like ...   226   3e-57
ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like ...   224   1e-56
gb|ACF06511.1| structural constituent of ribosome [Elaeis guinee...   223   2e-56
ref|XP_004148131.1| PREDICTED: 40S ribosomal protein S20-2-like ...   222   4e-56
gb|AEO32892.1| hypothetical protein [Amblyomma maculatum]             222   4e-56

>ref|XP_004143650.1| PREDICTED: 40S ribosomal protein S20-2-like [Cucumis sativus]
           gi|449488600|ref|XP_004158106.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Cucumis sativus]
          Length = 121

 Score =  226 bits (575), Expect = 3e-57
 Identities = 110/121 (90%), Positives = 119/121 (98%)
 Frame = +2

Query: 98  MAYAAMKPTKPGLEESQEQLHRIRITLSSKNVKNIEKVCADLVRGAKEKRLKVKGPVRIP 277
           MAYAAMKPTKPGLE++QEQ+H+IRITLSSKNVKN+EKVCADLVRGAK+KRL+VKGPVR+P
Sbjct: 1   MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 278 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLISSAEVVKQITSITIEPGVEVEVTIT 457
           TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDL SSA+VVKQITSITIEPGVEVEVTI 
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIA 120

Query: 458 D 460
           D
Sbjct: 121 D 121


>ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like [Glycine max]
           gi|356554377|ref|XP_003545523.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Glycine max]
          Length = 122

 Score =  224 bits (570), Expect = 1e-56
 Identities = 110/121 (90%), Positives = 117/121 (96%)
 Frame = +2

Query: 98  MAYAAMKPTKPGLEESQEQLHRIRITLSSKNVKNIEKVCADLVRGAKEKRLKVKGPVRIP 277
           MAYAAMKPTKPGLEESQEQ+H+IRITLSSKNVKN+EKVCADLVRGAK+K L+VKGPVR+P
Sbjct: 1   MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKHLRVKGPVRMP 60

Query: 278 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLISSAEVVKQITSITIEPGVEVEVTIT 457
           TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDL SS +VVKQITSITIEPGVEVEVTI 
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 458 D 460
           D
Sbjct: 121 D 121


>gb|ACF06511.1| structural constituent of ribosome [Elaeis guineensis]
          Length = 122

 Score =  223 bits (568), Expect = 2e-56
 Identities = 110/121 (90%), Positives = 118/121 (97%)
 Frame = +2

Query: 98  MAYAAMKPTKPGLEESQEQLHRIRITLSSKNVKNIEKVCADLVRGAKEKRLKVKGPVRIP 277
           MA+AAMKP KPGLEESQEQLHRIRITLSSKNVKN+EKVCADLVRGAK+KRL+VKGPVR+P
Sbjct: 1   MAFAAMKPAKPGLEESQEQLHRIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 278 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLISSAEVVKQITSITIEPGVEVEVTIT 457
           TKVL+ITTRKSPCGEGTNTWDRFELRVH+RVIDL+SS EVVKQITSITIEPGVEVEVTI 
Sbjct: 61  TKVLHITTRKSPCGEGTNTWDRFELRVHRRVIDLMSSPEVVKQITSITIEPGVEVEVTIA 120

Query: 458 D 460
           D
Sbjct: 121 D 121


>ref|XP_004148131.1| PREDICTED: 40S ribosomal protein S20-2-like isoform 1 [Cucumis
           sativus] gi|449460800|ref|XP_004148132.1| PREDICTED: 40S
           ribosomal protein S20-2-like isoform 2 [Cucumis sativus]
           gi|449528601|ref|XP_004171292.1| PREDICTED: 40S
           ribosomal protein S20-2-like isoform 1 [Cucumis sativus]
           gi|449528603|ref|XP_004171293.1| PREDICTED: 40S
           ribosomal protein S20-2-like isoform 2 [Cucumis sativus]
          Length = 122

 Score =  222 bits (566), Expect = 4e-56
 Identities = 109/121 (90%), Positives = 118/121 (97%)
 Frame = +2

Query: 98  MAYAAMKPTKPGLEESQEQLHRIRITLSSKNVKNIEKVCADLVRGAKEKRLKVKGPVRIP 277
           MAYAAMKPTKPGLE++QEQ+H+IRITLSSKNVKN+EKVCADLVRGAK+KRL+VKGPVR+P
Sbjct: 1   MAYAAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 278 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLISSAEVVKQITSITIEPGVEVEVTIT 457
           TKVL ITTRKSPCGEGTNTWDRFELRVHKRVIDL SSA+VVKQITSITIEPGVEVEVTI 
Sbjct: 61  TKVLLITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIA 120

Query: 458 D 460
           D
Sbjct: 121 D 121


>gb|AEO32892.1| hypothetical protein [Amblyomma maculatum]
          Length = 154

 Score =  222 bits (566), Expect = 4e-56
 Identities = 111/122 (90%), Positives = 115/122 (94%)
 Frame = +2

Query: 98  MAYAAMKPTKPGLEESQEQLHRIRITLSSKNVKNIEKVCADLVRGAKEKRLKVKGPVRIP 277
           MAYAAMKP K GLEESQEQLHRIRITLSSKNVKN+EKVCADLVRG K+K+L VKGPVR+P
Sbjct: 33  MAYAAMKPAKQGLEESQEQLHRIRITLSSKNVKNLEKVCADLVRGGKDKQLTVKGPVRMP 92

Query: 278 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLISSAEVVKQITSITIEPGVEVEVTIT 457
           TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDL SS EVVKQITSITIEPGVEVEVTI 
Sbjct: 93  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLTSSPEVVKQITSITIEPGVEVEVTIA 152

Query: 458 DP 463
           DP
Sbjct: 153 DP 154


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