BLASTX nr result

ID: Dioscorea21_contig00003347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003347
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61635.1| hypothetical protein OsJ_16077 [Oryza sativa Japo...   134   6e-30
gb|EEC77947.1| hypothetical protein OsI_17298 [Oryza sativa Indi...   134   6e-30
emb|CAH66777.1| OSIGBa0113I13.3 [Oryza sativa Indica Group]           134   6e-30
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                         129   3e-28

>gb|EEE61635.1| hypothetical protein OsJ_16077 [Oryza sativa Japonica Group]
          Length = 1322

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/90 (67%), Positives = 71/90 (78%)
 Frame = -1

Query: 270 EYFHKLVAENGGTFSMNLNDSVTHCIAAERKGIKYQAATRHGDVIHYSWILDCCTQKCLL 91
           +YFHKLV ENGG+FSMNLNDSVTHCIAAE+KGIKYQAATR G +IHYSWILDCC +K LL
Sbjct: 700 DYFHKLVVENGGSFSMNLNDSVTHCIAAEKKGIKYQAATRQGRIIHYSWILDCCKEKRLL 759

Query: 90  NLQPKYXXXXXXXXXXXLQEEIDPFSDFYY 1
           +LQPKY             EEID ++D++Y
Sbjct: 760 HLQPKYILFLADFARHKFPEEIDSYADYFY 789


>gb|EEC77947.1| hypothetical protein OsI_17298 [Oryza sativa Indica Group]
          Length = 1322

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/90 (67%), Positives = 71/90 (78%)
 Frame = -1

Query: 270 EYFHKLVAENGGTFSMNLNDSVTHCIAAERKGIKYQAATRHGDVIHYSWILDCCTQKCLL 91
           +YFHKLV ENGG+FSMNLNDSVTHCIAAE+KGIKYQAATR G +IHYSWILDCC +K LL
Sbjct: 700 DYFHKLVVENGGSFSMNLNDSVTHCIAAEKKGIKYQAATRQGRIIHYSWILDCCKEKRLL 759

Query: 90  NLQPKYXXXXXXXXXXXLQEEIDPFSDFYY 1
           +LQPKY             EEID ++D++Y
Sbjct: 760 HLQPKYILFLADFARHKFPEEIDSYADYFY 789


>emb|CAH66777.1| OSIGBa0113I13.3 [Oryza sativa Indica Group]
          Length = 1281

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/90 (67%), Positives = 71/90 (78%)
 Frame = -1

Query: 270 EYFHKLVAENGGTFSMNLNDSVTHCIAAERKGIKYQAATRHGDVIHYSWILDCCTQKCLL 91
           +YFHKLV ENGG+FSMNLNDSVTHCIAAE+KGIKYQAATR G +IHYSWILDCC +K LL
Sbjct: 659 DYFHKLVVENGGSFSMNLNDSVTHCIAAEKKGIKYQAATRQGRIIHYSWILDCCKEKRLL 718

Query: 90  NLQPKYXXXXXXXXXXXLQEEIDPFSDFYY 1
           +LQPKY             EEID ++D++Y
Sbjct: 719 HLQPKYILFLADFARHKFPEEIDSYADYFY 748


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
           predicted protein [Populus trichocarpa]
          Length = 1242

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/90 (70%), Positives = 67/90 (74%)
 Frame = -1

Query: 270 EYFHKLVAENGGTFSMNLNDSVTHCIAAERKGIKYQAATRHGDVIHYSWILDCCTQKCLL 91
           E  HK+VAENGGTFSMNLN+SVTHCIAAE KGIKYQAA  HGD+IHYSW+LDCC QK LL
Sbjct: 682 ESLHKMVAENGGTFSMNLNNSVTHCIAAESKGIKYQAAKLHGDIIHYSWVLDCCLQKKLL 741

Query: 90  NLQPKYXXXXXXXXXXXLQEEIDPFSDFYY 1
            LQPK            L EEID FSD YY
Sbjct: 742 PLQPKSFLFLSDGSKKKLHEEIDEFSDSYY 771


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/90 (70%), Positives = 67/90 (74%)
 Frame = -1

Query: 270 EYFHKLVAENGGTFSMNLNDSVTHCIAAERKGIKYQAATRHGDVIHYSWILDCCTQKCLL 91
           E  HK+VAENGGTFSMNLN+SVTHCIAAE KGIKYQAA  HGD+IHYSW+LDCC QK LL
Sbjct: 682 ESLHKMVAENGGTFSMNLNNSVTHCIAAESKGIKYQAAKLHGDIIHYSWVLDCCLQKKLL 741

Query: 90  NLQPKYXXXXXXXXXXXLQEEIDPFSDFYY 1
            LQPK            L EEID FSD YY
Sbjct: 742 PLQPKSFLFLSDGSKKKLHEEIDEFSDSYY 771


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