BLASTX nr result

ID: Dioscorea21_contig00002988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002988
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238359.1| arginine decarboxylase [Glycine max] gi|3915...   124   6e-27
ref|XP_003522832.1| PREDICTED: arginine decarboxylase-like [Glyc...   124   8e-27
gb|AFN26936.1| arginine decarboxylase [Camellia sinensis]             119   2e-25
gb|AAR84411.2| arginine decarboxylase [Daucus carota]                 117   1e-24
gb|ABX80379.1| arginine decarboxylase [Triticum aestivum]             115   3e-24

>ref|NP_001238359.1| arginine decarboxylase [Glycine max]
           gi|3915009|sp|Q39827.1|SPE1_SOYBN RecName: Full=Arginine
           decarboxylase; Short=ADC; Short=ARGDC
           gi|1163181|gb|AAD09204.1| arginine decarboxylase
           [Glycine max]
          Length = 692

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/89 (68%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
 Frame = -2

Query: 384 LFGGPSVIRVSQSDGPHCFAVTRAAPGPSCADVLRTMQHSPELMFDALKHRAEEHVPVDG 205
           LFGGPSV+RVSQSDGPH FAVTRA PGPSC DVLR MQH PELMF+ LKHRA+E+V  D 
Sbjct: 587 LFGGPSVVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHQPELMFETLKHRAQEYVSHDN 646

Query: 204 VES-LACGLARAFGSMPYLVGAVGMVGDD 121
             + LA GLAR F  MPYL+     V DD
Sbjct: 647 AAALLAAGLARTFDRMPYLLSLSSFVADD 675


>ref|XP_003522832.1| PREDICTED: arginine decarboxylase-like [Glycine max]
          Length = 697

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/89 (69%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
 Frame = -2

Query: 384 LFGGPSVIRVSQSDGPHCFAVTRAAPGPSCADVLRTMQHSPELMFDALKHRAEEHVPVDG 205
           LFGGPSVIRVSQSDGPH FAVTRA PGPSC DVLR MQH PELMF+ LKHRA+E+V  D 
Sbjct: 587 LFGGPSVIRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHQPELMFETLKHRAQEYVSHDN 646

Query: 204 VES-LACGLARAFGSMPYLVGAVGMVGDD 121
             + LA GLAR F  MPYL+     V DD
Sbjct: 647 AAAVLAAGLARTFDRMPYLLPLSSFVADD 675


>gb|AFN26936.1| arginine decarboxylase [Camellia sinensis]
          Length = 720

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/85 (70%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
 Frame = -2

Query: 384 LFGGPSVIRVSQSDGPHCFAVTRAAPGPSCADVLRTMQHSPELMFDALKHRAEEHVPVDG 205
           LFGGPSV+RVSQ+DGPH FAVTRA PGPSC DVLR MQH PELMF+ LKHRAEE V  DG
Sbjct: 595 LFGGPSVVRVSQNDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFEVLKHRAEEFVHDDG 654

Query: 204 ----VESLACGLARAFGSMPYLVGA 142
                 SLA G+AR+F + PYLV A
Sbjct: 655 NGMATASLASGIARSFNNTPYLVMA 679


>gb|AAR84411.2| arginine decarboxylase [Daucus carota]
          Length = 570

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/86 (67%), Positives = 69/86 (80%), Gaps = 5/86 (5%)
 Frame = -2

Query: 384 LFGGPSVIRVSQSDGPHCFAVTRAAPGPSCADVLRTMQHSPELMFDALKHRAEEHVPVDG 205
           LFGGPSV+RVSQSDGPH FAVTRA PGPSCADVLR MQH PE+MF+ LKHRAEE+V  +G
Sbjct: 445 LFGGPSVVRVSQSDGPHSFAVTRAVPGPSCADVLRVMQHEPEMMFEELKHRAEEYVLDEG 504

Query: 204 -----VESLACGLARAFGSMPYLVGA 142
                 +++A GLA +F +MPYLV +
Sbjct: 505 GHGLDHDAIANGLACSFHNMPYLVNS 530


>gb|ABX80379.1| arginine decarboxylase [Triticum aestivum]
          Length = 712

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/78 (74%), Positives = 63/78 (80%)
 Frame = -2

Query: 384 LFGGPSVIRVSQSDGPHCFAVTRAAPGPSCADVLRTMQHSPELMFDALKHRAEEHVPVDG 205
           LFGGPSV+RVSQSDGPHCFAVTRAAPGPSCADVLR MQH PE+MF+ LK R  +    DG
Sbjct: 596 LFGGPSVVRVSQSDGPHCFAVTRAAPGPSCADVLRAMQHEPEVMFEVLKQRTTD----DG 651

Query: 204 VESLACGLARAFGSMPYL 151
             + A  LARAFGSMPYL
Sbjct: 652 --ATAAALARAFGSMPYL 667


Top