BLASTX nr result
ID: Dioscorea21_contig00002987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002987
(1930 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI32131.3| unnamed protein product [Vitis vinifera] 716 0.0
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro... 716 0.0
ref|XP_002301428.1| predicted protein [Populus trichocarpa] gi|2... 695 0.0
ref|XP_002320218.1| predicted protein [Populus trichocarpa] gi|2... 692 0.0
gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding re... 684 0.0
>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
Length = 523
Score = 716 bits (1849), Expect = 0.0
Identities = 377/480 (78%), Positives = 400/480 (83%)
Frame = +1
Query: 112 ANFADSFLADLDELSDNEEPILDNEDIDAENMEEDGDGDMADLEALNYDDLDSVSKLQKT 291
A +D FLADL+ELSDNE + + +D+ NMEED DG+MAD+EALNYDDLDSVSKLQKT
Sbjct: 40 AALSDPFLADLEELSDNEADLANEDDMGVGNMEEDDDGEMADIEALNYDDLDSVSKLQKT 99
Query: 292 QRYNDIMQKVEDALQKGTDISSQGMVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDN 471
QRY DIMQKVEDAL+KG+D+S+ G+VLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDN
Sbjct: 100 QRYIDIMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDN 159
Query: 472 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL 651
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL
Sbjct: 160 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL 219
Query: 652 PEENLKKTIDACDRALALDVAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLS 831
PEENLKKT+DACDRALALD+AKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL+
Sbjct: 220 PEENLKKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLT 279
Query: 832 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLDQTEIFQSTPPSLRVRACRLLAAKS 1011
ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGY++QTEIFQSTPPSLR+RACRLLAAKS
Sbjct: 280 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKS 339
Query: 1012 TLAARVDSTRGDPTGKTGRDLREEIRKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXX 1191
TL+ARVDSTRGDPTGKTGR LREEI KKIEKWQE DSEP
Sbjct: 340 TLSARVDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 399
Query: 1192 XXXXXXYAITDMRKLANRMQFGVPEESSXXXXXXXXXXXXXXXXSGKLRVSVAQSKLATK 1371
YAITDMRKLANRMQFGVPEESS +GKLRVSV QSKLA K
Sbjct: 400 RKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAAK 459
Query: 1372 AAKRFKDKHYXXXXXXXXXXXXXXXFTPVQGIELSNPQAHGNLLGSGTQSTYFSEIGTFS 1551
AK+FK+K Y FTPVQGIELSNPQAH N LGSGTQSTYFSEIGTFS
Sbjct: 460 VAKKFKEKQY-GSSGATSGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEIGTFS 518
>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
vinifera]
Length = 489
Score = 716 bits (1849), Expect = 0.0
Identities = 377/480 (78%), Positives = 400/480 (83%)
Frame = +1
Query: 112 ANFADSFLADLDELSDNEEPILDNEDIDAENMEEDGDGDMADLEALNYDDLDSVSKLQKT 291
A +D FLADL+ELSDNE + + +D+ NMEED DG+MAD+EALNYDDLDSVSKLQKT
Sbjct: 6 AALSDPFLADLEELSDNEADLANEDDMGVGNMEEDDDGEMADIEALNYDDLDSVSKLQKT 65
Query: 292 QRYNDIMQKVEDALQKGTDISSQGMVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDN 471
QRY DIMQKVEDAL+KG+D+S+ G+VLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDN
Sbjct: 66 QRYIDIMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDN 125
Query: 472 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL 651
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL
Sbjct: 126 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL 185
Query: 652 PEENLKKTIDACDRALALDVAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLS 831
PEENLKKT+DACDRALALD+AKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL+
Sbjct: 186 PEENLKKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLT 245
Query: 832 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLDQTEIFQSTPPSLRVRACRLLAAKS 1011
ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGY++QTEIFQSTPPSLR+RACRLLAAKS
Sbjct: 246 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKS 305
Query: 1012 TLAARVDSTRGDPTGKTGRDLREEIRKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXX 1191
TL+ARVDSTRGDPTGKTGR LREEI KKIEKWQE DSEP
Sbjct: 306 TLSARVDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 365
Query: 1192 XXXXXXYAITDMRKLANRMQFGVPEESSXXXXXXXXXXXXXXXXSGKLRVSVAQSKLATK 1371
YAITDMRKLANRMQFGVPEESS +GKLRVSV QSKLA K
Sbjct: 366 RKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAAK 425
Query: 1372 AAKRFKDKHYXXXXXXXXXXXXXXXFTPVQGIELSNPQAHGNLLGSGTQSTYFSEIGTFS 1551
AK+FK+K Y FTPVQGIELSNPQAH N LGSGTQSTYFSEIGTFS
Sbjct: 426 VAKKFKEKQY-GSSGATSGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEIGTFS 484
>ref|XP_002301428.1| predicted protein [Populus trichocarpa] gi|222843154|gb|EEE80701.1|
predicted protein [Populus trichocarpa]
Length = 486
Score = 695 bits (1793), Expect = 0.0
Identities = 366/482 (75%), Positives = 398/482 (82%), Gaps = 1/482 (0%)
Frame = +1
Query: 109 MANFADSFLADLDELSDNEEPILD-NEDIDAENMEEDGDGDMADLEALNYDDLDSVSKLQ 285
MA ADSFLADLDELSDN+ I+D ++D++A NMEED DGD+AD+EALNYDDLDSVSKLQ
Sbjct: 1 MATLADSFLADLDELSDNDADIVDEDDDVEAGNMEEDVDGDLADIEALNYDDLDSVSKLQ 60
Query: 286 KTQRYNDIMQKVEDALQKGTDISSQGMVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIR 465
KTQR+NDIMQKVEDALQKG+D+ GMVLEDDPEYQLIV+CNALSVDIENEIVIIHNFIR
Sbjct: 61 KTQRFNDIMQKVEDALQKGSDVQDHGMVLEDDPEYQLIVNCNALSVDIENEIVIIHNFIR 120
Query: 466 DNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGK 645
D YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVD+EGL+P+AI MV+SVTASTTSGK
Sbjct: 121 DKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDMEGLIPAAIRMVISVTASTTSGK 180
Query: 646 PLPEENLKKTIDACDRALALDVAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGG 825
PLPEE L+KTIDAC+RALALD AKKKVLDFVE+RMGYIAPNLSAIVGSAVAAKLMG AGG
Sbjct: 181 PLPEEVLQKTIDACNRALALDSAKKKVLDFVETRMGYIAPNLSAIVGSAVAAKLMGMAGG 240
Query: 826 LSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLDQTEIFQSTPPSLRVRACRLLAA 1005
L+ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGY++QTE+FQSTPPSLR+RA RLLAA
Sbjct: 241 LTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQSTPPSLRMRAGRLLAA 300
Query: 1006 KSTLAARVDSTRGDPTGKTGRDLREEIRKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXX 1185
KSTLAARVDSTRGDP+G TGR LREEI KKIEKWQE DSEP
Sbjct: 301 KSTLAARVDSTRGDPSGNTGRTLREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGR 360
Query: 1186 XXXXXXXXYAITDMRKLANRMQFGVPEESSXXXXXXXXXXXXXXXXSGKLRVSVAQSKLA 1365
YAITDMRKLANRMQFGVPEESS +GKLRVS+ QSKLA
Sbjct: 361 RLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSIGQSKLA 420
Query: 1366 TKAAKRFKDKHYXXXXXXXXXXXXXXXFTPVQGIELSNPQAHGNLLGSGTQSTYFSEIGT 1545
K AK+FK+K+Y FTPVQGIEL+NPQAH + LGSGTQSTYFSE GT
Sbjct: 421 AKVAKKFKEKNY-GSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSENGT 479
Query: 1546 FS 1551
FS
Sbjct: 480 FS 481
>ref|XP_002320218.1| predicted protein [Populus trichocarpa] gi|222860991|gb|EEE98533.1|
predicted protein [Populus trichocarpa]
Length = 483
Score = 692 bits (1787), Expect = 0.0
Identities = 363/480 (75%), Positives = 394/480 (82%)
Frame = +1
Query: 112 ANFADSFLADLDELSDNEEPILDNEDIDAENMEEDGDGDMADLEALNYDDLDSVSKLQKT 291
A ADSFLADLDELSDN+ I + +D++A NMEED DGD+AD+EALNYDDLD+VSKLQKT
Sbjct: 1 ATLADSFLADLDELSDNDANI-EEDDVEAGNMEEDVDGDLADIEALNYDDLDTVSKLQKT 59
Query: 292 QRYNDIMQKVEDALQKGTDISSQGMVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDN 471
QRYNDIMQKVEDAL+KG+ + GMVLEDDPEYQLIV+CN LSVDIENEIVIIHNFIRD
Sbjct: 60 QRYNDIMQKVEDALEKGSGVQDHGMVLEDDPEYQLIVNCNVLSVDIENEIVIIHNFIRDK 119
Query: 472 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL 651
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVD+EGLLP+AI MV+SVTASTTSGKPL
Sbjct: 120 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDMEGLLPAAIRMVISVTASTTSGKPL 179
Query: 652 PEENLKKTIDACDRALALDVAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLS 831
PEE L+KTI+ACDRALALD AKKKVLDFVE+RMGYIAPNLSAIVGSAVAAKLMGTAGGL+
Sbjct: 180 PEEVLQKTIEACDRALALDSAKKKVLDFVETRMGYIAPNLSAIVGSAVAAKLMGTAGGLT 239
Query: 832 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLDQTEIFQSTPPSLRVRACRLLAAKS 1011
ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVG+++QTE+FQSTPPSLR+RA RLLAAKS
Sbjct: 240 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGFIEQTEVFQSTPPSLRMRAGRLLAAKS 299
Query: 1012 TLAARVDSTRGDPTGKTGRDLREEIRKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXX 1191
TLAARVDSTRGDP+G TGR LREEIRKKIEKWQE DSEP
Sbjct: 300 TLAARVDSTRGDPSGNTGRALREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 359
Query: 1192 XXXXXXYAITDMRKLANRMQFGVPEESSXXXXXXXXXXXXXXXXSGKLRVSVAQSKLATK 1371
YAITDMRKLANRMQFGVPEESS +GKLRVS+ QSKLA K
Sbjct: 360 RKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSIGQSKLAAK 419
Query: 1372 AAKRFKDKHYXXXXXXXXXXXXXXXFTPVQGIELSNPQAHGNLLGSGTQSTYFSEIGTFS 1551
AK+FK+K Y FTPVQGIELSNPQ+H + LGSGTQSTYFSE GTFS
Sbjct: 420 VAKKFKEKRYGSSSGATSGLTSSLAFTPVQGIELSNPQSHAHQLGSGTQSTYFSENGTFS 479
>gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding region; NOSIC
[Medicago truncatula]
Length = 484
Score = 684 bits (1765), Expect = 0.0
Identities = 363/481 (75%), Positives = 391/481 (81%)
Frame = +1
Query: 109 MANFADSFLADLDELSDNEEPILDNEDIDAENMEEDGDGDMADLEALNYDDLDSVSKLQK 288
MA AD+FLADLDELSDNE I + D DA +M+ED DGD+ADLE LNYDDLDSVSKLQ+
Sbjct: 1 MATLADTFLADLDELSDNEAEIPADNDADAADMDEDVDGDLADLENLNYDDLDSVSKLQQ 60
Query: 289 TQRYNDIMQKVEDALQKGTDISSQGMVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD 468
TQRY D+MQKVE+AL+KG+D+S QG+ LEDDPEYQLIV+CNALSVDIENEIVIIHNFIRD
Sbjct: 61 TQRYVDVMQKVEEALKKGSDVS-QGLDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRD 119
Query: 469 NYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP 648
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTT+GKP
Sbjct: 120 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKP 179
Query: 649 LPEENLKKTIDACDRALALDVAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 828
LPEE L KTI+ACDRALALD AKKKVLDFVESRMGYIAPN+SAIVGSAVAAKLMGTAGGL
Sbjct: 180 LPEEVLSKTIEACDRALALDSAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGL 239
Query: 829 SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLDQTEIFQSTPPSLRVRACRLLAAK 1008
SALAKMPACNVQLLGAKKKNLAGFSTATSQF VGY++QTEIFQ+TPPS R+RACRL+AAK
Sbjct: 240 SALAKMPACNVQLLGAKKKNLAGFSTATSQFHVGYIEQTEIFQTTPPSFRMRACRLVAAK 299
Query: 1009 STLAARVDSTRGDPTGKTGRDLREEIRKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXX 1188
STLAARVDS RGDP+GKTGR L++EI KKIEKWQE DSEP
Sbjct: 300 STLAARVDSIRGDPSGKTGRSLKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 359
Query: 1189 XXXXXXXYAITDMRKLANRMQFGVPEESSXXXXXXXXXXXXXXXXSGKLRVSVAQSKLAT 1368
YAITDMRKLANRMQFG+PEESS SGKLRVS QSKLA
Sbjct: 360 LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAA 419
Query: 1369 KAAKRFKDKHYXXXXXXXXXXXXXXXFTPVQGIELSNPQAHGNLLGSGTQSTYFSEIGTF 1548
K AK+FK+K Y FTPVQGIELSNPQAH + LGSGTQSTYFSE GTF
Sbjct: 420 KVAKKFKEKSY-GSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTF 478
Query: 1549 S 1551
S
Sbjct: 479 S 479