BLASTX nr result

ID: Dioscorea21_contig00002972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002972
         (1881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD16457.1| kelch repeat-containing F-box-like [Oryza sativa...   607   e-171
ref|NP_001168670.1| uncharacterized protein LOC100382458 [Zea ma...   600   e-169
ref|XP_003570649.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   597   e-168
emb|CBI15248.3| unnamed protein product [Vitis vinifera]              595   e-167
ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   591   e-166

>dbj|BAD16457.1| kelch repeat-containing F-box-like [Oryza sativa Japonica Group]
          Length = 426

 Score =  607 bits (1565), Expect = e-171
 Identities = 294/445 (66%), Positives = 349/445 (78%), Gaps = 4/445 (0%)
 Frame = -2

Query: 1649 MLEGQSYMISRAVPSSCEQEPKWIYMACQLLDQSKNKRHMNDESREQEKGHKI----KRK 1482
            MLEGQS +ISR++PSSC+QE +  YM   LL+ +++KR  +    E +    +    KR 
Sbjct: 1    MLEGQSCLISRSLPSSCDQESRLAYMTYHLLEITRSKRISSTPRIEPDSVAAVAVLTKRP 60

Query: 1481 KSPRSPLSPNIEEMEPNSLETIEEMECPDETDGNGSGGDYPDSNSLISSIGRDNSINCLL 1302
            KS R+                 E+++C    D       + DS++LISSIGRDNSI+CL 
Sbjct: 61   KSARN--------------HECEQLDCQGSNDQG-----FSDSSTLISSIGRDNSISCLA 101

Query: 1301 RCSRSDYGSLASLNKSFRSLIQSGELYRLRRQMGITEHWVYFSCHVLEWEAYDPYRGRWL 1122
            RCSRSDYGS+AS+N++F SL++SGELY+ RRQ+GI EHWVYFSC+V EWEAYDPYR RW+
Sbjct: 102  RCSRSDYGSIASVNRNFHSLVRSGELYKERRQLGIAEHWVYFSCNVQEWEAYDPYRSRWM 161

Query: 1121 TLPRLPHNECFMCSDKESLAVGTELLVFGKEVTSHIVLRYSILTNSWSSGKAMNSPRCLF 942
            TLP++PHNECFMCSDKESLAVGTELLVFGKE+ SHIVL YSILTNSWS G  MN+PRCLF
Sbjct: 162  TLPKMPHNECFMCSDKESLAVGTELLVFGKEILSHIVLSYSILTNSWSPGVDMNAPRCLF 221

Query: 941  GSASLGEKAIVAGGTDAHGNILSSAELYNSEKQTWTTLPSMITPRKMCSGVFMNGKFYVI 762
            GSAS GEKAIVAGG DA G +L SAELYNSE + W TLP M   R+MCSGVFMNGKFYVI
Sbjct: 222  GSASFGEKAIVAGGMDAQGRVLRSAELYNSETKRWITLPCMNKARRMCSGVFMNGKFYVI 281

Query: 761  GGMSSNTQLLTCGEEYDLERGTWRLIPNMSSGLNGASGAPPLVAVVNNNLYAAHYSEKEI 582
            GGM+SNT++LTCGEEYDLE+GTWR+I NMS GLNGASGAPPLVAVV N LYAA Y+ K +
Sbjct: 282  GGMASNTEVLTCGEEYDLEKGTWRVIENMSEGLNGASGAPPLVAVVENELYAAQYAGKLV 341

Query: 581  RKYDKETNSWITLGRLPERPASMNGWGLAFRACGERLIVIGGPRVLGGGMIELHSWKPKD 402
            RKY+ + N+W TLG LPERP ++NGWG+AFR CGERL+VIGGPRV+GGGMIELHSW P++
Sbjct: 342  RKYNIKDNTWTTLGELPERPEAVNGWGIAFRGCGERLLVIGGPRVMGGGMIELHSWIPRE 401

Query: 401  GPPEWTMIASKHSGSFVYNCAVMGC 327
            GP  W MI SK SG+FVYNCAVMGC
Sbjct: 402  GPLRWNMIGSKPSGNFVYNCAVMGC 426


>ref|NP_001168670.1| uncharacterized protein LOC100382458 [Zea mays]
            gi|223944871|gb|ACN26519.1| unknown [Zea mays]
            gi|223950089|gb|ACN29128.1| unknown [Zea mays]
            gi|224030281|gb|ACN34216.1| unknown [Zea mays]
            gi|413924555|gb|AFW64487.1| hypothetical protein
            ZEAMMB73_909642 [Zea mays] gi|413924556|gb|AFW64488.1|
            hypothetical protein ZEAMMB73_909642 [Zea mays]
            gi|413924557|gb|AFW64489.1| hypothetical protein
            ZEAMMB73_909642 [Zea mays] gi|413924558|gb|AFW64490.1|
            hypothetical protein ZEAMMB73_909642 [Zea mays]
          Length = 423

 Score =  600 bits (1548), Expect = e-169
 Identities = 295/441 (66%), Positives = 347/441 (78%)
 Frame = -2

Query: 1649 MLEGQSYMISRAVPSSCEQEPKWIYMACQLLDQSKNKRHMNDESREQEKGHKIKRKKSPR 1470
            MLE QS +ISR++P SCEQE +  YM   LL+ +++KR     S E    H +    + R
Sbjct: 1    MLEDQSCLISRSLPGSCEQESRLAYMTYHLLEITRSKRPPGTLSIE----HDVVAALTKR 56

Query: 1469 SPLSPNIEEMEPNSLETIEEMECPDETDGNGSGGDYPDSNSLISSIGRDNSINCLLRCSR 1290
            +  S +         +  E ++C     G+   GD  DS++LISSIGRDNSINCL RCSR
Sbjct: 57   TKSSEH---------QNSEALDC----QGSNGQGD-SDSSTLISSIGRDNSINCLARCSR 102

Query: 1289 SDYGSLASLNKSFRSLIQSGELYRLRRQMGITEHWVYFSCHVLEWEAYDPYRGRWLTLPR 1110
            SDYGS+ASLN+SFRSL++SGELY+ RRQ GI+EHWVYFSC+V EWEAYDPYR RW+TLPR
Sbjct: 103  SDYGSIASLNRSFRSLVRSGELYKERRQQGISEHWVYFSCNVQEWEAYDPYRSRWMTLPR 162

Query: 1109 LPHNECFMCSDKESLAVGTELLVFGKEVTSHIVLRYSILTNSWSSGKAMNSPRCLFGSAS 930
            +P NECFM SDKESLAVGTELLVFGKE+ SHI+L YSILT+SWS G  MN+PRCLFGSAS
Sbjct: 163  MPRNECFMHSDKESLAVGTELLVFGKEILSHIILSYSILTHSWSRGVEMNAPRCLFGSAS 222

Query: 929  LGEKAIVAGGTDAHGNILSSAELYNSEKQTWTTLPSMITPRKMCSGVFMNGKFYVIGGMS 750
             GEKAI+AGG DA G +L S ELYNSE + WTTLPSM   R+ CSGVFM+GKFYVIGGM+
Sbjct: 223  FGEKAIIAGGMDADGRVLRSVELYNSETKRWTTLPSMNKARRKCSGVFMDGKFYVIGGMA 282

Query: 749  SNTQLLTCGEEYDLERGTWRLIPNMSSGLNGASGAPPLVAVVNNNLYAAHYSEKEIRKYD 570
            SNT++LTCGEEYDL+RGTWR+I NMS GLNGASGAPPLVAVV N LYAA Y+ K +RKY+
Sbjct: 283  SNTEVLTCGEEYDLDRGTWRVIENMSEGLNGASGAPPLVAVVENELYAAQYAGKLVRKYN 342

Query: 569  KETNSWITLGRLPERPASMNGWGLAFRACGERLIVIGGPRVLGGGMIELHSWKPKDGPPE 390
            K  NSW TLG LPERP +++GWG+AFR CGERL+VIGGPRVLGGGMIELHSW P +GP +
Sbjct: 343  KRDNSWTTLGELPERPEAVDGWGIAFRGCGERLLVIGGPRVLGGGMIELHSWIPSEGPLQ 402

Query: 389  WTMIASKHSGSFVYNCAVMGC 327
            W MI SK SG+FVYNCAVMGC
Sbjct: 403  WNMIGSKPSGNFVYNCAVMGC 423


>ref|XP_003570649.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Brachypodium
            distachyon]
          Length = 427

 Score =  597 bits (1538), Expect = e-168
 Identities = 295/443 (66%), Positives = 348/443 (78%), Gaps = 2/443 (0%)
 Frame = -2

Query: 1649 MLEGQSYMISRAVPSSCEQEPKWIYMACQLLDQSKNKRHMNDESREQEKGHKIKRKKSPR 1470
            MLEGQS +ISR++P+S EQE +  YM   LL+ ++ KR     + EQ+    +    S +
Sbjct: 1    MLEGQSCLISRSLPTSSEQESRLAYMTYHLLEITRTKRPSGVLAIEQDGIAVVA--VSAK 58

Query: 1469 SPLSPNIEEMEPNSLETIEEMECPDETDGNGSGGD-YPDSNSLISSIGRDNSINCLLRCS 1293
             P S +    EP               D  GS G  Y DS++LISSIGRDNSINCL RCS
Sbjct: 59   RPKSEDKNNDEP--------------VDCQGSNGQGYSDSSTLISSIGRDNSINCLARCS 104

Query: 1292 RSDYGSLASLNKSFRSLIQSGELYRLRRQMGITEHWVYFSCHVLEWEAYDPYRGRWLTLP 1113
            RSDYGS+ASLN++FRSL++ G LY+ RR++GI EHWVYFSC+V EWEAYDPYR RW+TLP
Sbjct: 105  RSDYGSIASLNRNFRSLVRDGGLYKERRRLGIAEHWVYFSCNVQEWEAYDPYRSRWMTLP 164

Query: 1112 RLPHNECFMCSDKESLAVGTELLVFGKEVTSHIVLRYSILTNSWSSGKAMNSPRCLFGSA 933
            R+P NECFMCSDKESLAVGTELLVFGKE+ +HIVL YSILTNSWS G  MN+PRCLFGSA
Sbjct: 165  RMPPNECFMCSDKESLAVGTELLVFGKEILAHIVLSYSILTNSWSRGVEMNAPRCLFGSA 224

Query: 932  SLGEKAIVAGGTDAHGNILSSAELYNSEKQTWTTLPSMITPRKMCSGVFMNGKFYVIGGM 753
            S GEKAI+AGG DA G +L SAELYNSE + WTTL SM   R+MCSGVFM+GKFYVIGGM
Sbjct: 225  SFGEKAIIAGGMDASGQVLRSAELYNSETKKWTTLTSMNKARRMCSGVFMDGKFYVIGGM 284

Query: 752  S-SNTQLLTCGEEYDLERGTWRLIPNMSSGLNGASGAPPLVAVVNNNLYAAHYSEKEIRK 576
            + SNT++LTCGEEYDL++GTWR+I NMS GLNGASGAPPLVAVV+N LYAA Y+ K +RK
Sbjct: 285  AGSNTEVLTCGEEYDLDKGTWRVIENMSEGLNGASGAPPLVAVVDNELYAAQYAGKLVRK 344

Query: 575  YDKETNSWITLGRLPERPASMNGWGLAFRACGERLIVIGGPRVLGGGMIELHSWKPKDGP 396
            Y+K  N+W TLG LPERP ++NGWG+AFR CGERL+VIGGPRVLGGGMIELHSW P++GP
Sbjct: 345  YNKSDNTWTTLGELPERPEAVNGWGIAFRGCGERLLVIGGPRVLGGGMIELHSWIPREGP 404

Query: 395  PEWTMIASKHSGSFVYNCAVMGC 327
             +W MI SK SG+FVYNCAVMGC
Sbjct: 405  LQWNMIGSKPSGNFVYNCAVMGC 427


>emb|CBI15248.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  595 bits (1534), Expect = e-167
 Identities = 293/442 (66%), Positives = 340/442 (76%), Gaps = 1/442 (0%)
 Frame = -2

Query: 1649 MLEGQSYMISRAVPSSCEQEPKWIYMACQLLDQSKNKRHMNDESREQEKGHKIKRKKSPR 1470
            MLEG SY+ISR +P++CEQE KWIY    +++ S +KR + D   E  +G          
Sbjct: 66   MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPLEDGEDETMQG---------- 115

Query: 1469 SPLSPNIEEMEPNSLETIEEMECPDETDGNGSGGDYPDSNSLISSIGRDNSINCLLRCSR 1290
                     +   SL    +     +T      GD  D +SLIS IGRDNSINCLL+CSR
Sbjct: 116  ---------LHDLSLSQANQSNTHHDT------GDQSDLSSLISQIGRDNSINCLLQCSR 160

Query: 1289 SDYGSLASLNKSFRSLIQSGELYRLRRQMGITEHWVYFSCHVLEWEAYDPYRGRWLTLPR 1110
            SDYGS+ASLN+SFRSLI+ GELYRLRR++GI EHWVYFSC +L+WEA+DP R RW+ LPR
Sbjct: 161  SDYGSIASLNRSFRSLIRGGELYRLRRKLGIVEHWVYFSCDLLQWEAFDPIRRRWMHLPR 220

Query: 1109 LPHNECFMCSDKESLAVGTELLVFGKEVTSHIVLRYSILTNSWSSGKAMNSPRCLFGSAS 930
            +P  ECFMCSDKESLAVGTELLVFGKEVTSH+V +YSILTNSWSSG  MNSPRCLFGSAS
Sbjct: 221  MPSYECFMCSDKESLAVGTELLVFGKEVTSHVVYKYSILTNSWSSGMNMNSPRCLFGSAS 280

Query: 929  LGEKAIVAGGTDAHGNILSSAELYNSEKQTWTTLPSMITPRKMCSGVFMNGKFYVIGGMS 750
            LGE AI+AGG D  GNILSSAELYNS+  TW TLPSM  PRKMCSG+FM+ KFYVIGG+ 
Sbjct: 281  LGEIAILAGGCDPRGNILSSAELYNSDTGTWVTLPSMNKPRKMCSGIFMDRKFYVIGGIG 340

Query: 749  -SNTQLLTCGEEYDLERGTWRLIPNMSSGLNGASGAPPLVAVVNNNLYAAHYSEKEIRKY 573
              N+  LTCGE YDLE  TWR IPNM  G NG++GAPPLVAVVNN LYAA Y+EKE+RKY
Sbjct: 341  VGNSNSLTCGEVYDLEMRTWREIPNMFPGRNGSAGAPPLVAVVNNELYAADYAEKEVRKY 400

Query: 572  DKETNSWITLGRLPERPASMNGWGLAFRACGERLIVIGGPRVLGGGMIELHSWKPKDGPP 393
            DK  N W+T+GRLPE+  SMNGWGLAFRACG+RLIVIGGPRVLGGG+IEL+SW P +GPP
Sbjct: 401  DKARNLWVTVGRLPEQAVSMNGWGLAFRACGDRLIVIGGPRVLGGGIIELNSWSPGEGPP 460

Query: 392  EWTMIASKHSGSFVYNCAVMGC 327
            +W ++A K SGSFVYNCAVMGC
Sbjct: 461  QWDLLARKQSGSFVYNCAVMGC 482


>ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
          Length = 443

 Score =  591 bits (1524), Expect = e-166
 Identities = 294/452 (65%), Positives = 345/452 (76%), Gaps = 11/452 (2%)
 Frame = -2

Query: 1649 MLEGQSYMISRAVPSSCEQEPKWIYMACQLLDQSKNKRHMNDESREQEKGHKIKRKKSPR 1470
            MLEG SY+ISR +P++CEQE KWIY    +++ S +KR + D    ++ G +   K S  
Sbjct: 1    MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPLEDG---EDVGLRKFSKPSDG 57

Query: 1469 SPLSPNIEEMEPNSLETIEEMECPDETDGNGSGGDYPDSNSLISSIGRDNSINCLLRCSR 1290
                  ++ +   SL    +     +T      GD  D +SLIS IGRDNSINCLL+CSR
Sbjct: 58   HETEETMQGLHDLSLSQANQSNTHHDT------GDQSDLSSLISQIGRDNSINCLLQCSR 111

Query: 1289 SDYGSLASLNKSFRSLIQSGELYRLRRQMGITEHWVYFSCHVLEWEAYDPYRGRWLTLPR 1110
            SDYGS+ASLN+SFRSLI+ GELYRLRR++GI EHWVYFSC +L+WEA+DP R RW+ LPR
Sbjct: 112  SDYGSIASLNRSFRSLIRGGELYRLRRKLGIVEHWVYFSCDLLQWEAFDPIRRRWMHLPR 171

Query: 1109 LPHNECFMCSDKESLAVGTELLVFGKEVTSHIVLRYSILTNSWSSGKAMNSPRCLFGSAS 930
            +P  ECFMCSDKESLAVGTELLVFGKEVTSH+V +YSILTNSWSSG  MNSPRCLFGSAS
Sbjct: 172  MPSYECFMCSDKESLAVGTELLVFGKEVTSHVVYKYSILTNSWSSGMNMNSPRCLFGSAS 231

Query: 929  LGEKAIVAGGTDAHGNILSSAELYNSEKQTWTTLPSMITPRKMCSGVFMNGKFYVIGGMS 750
            LGE AI+AGG D  GNILSSAELYNS+  TW TLPSM  PRKMCSG+FM+ KFYVIGG+ 
Sbjct: 232  LGEIAILAGGCDPRGNILSSAELYNSDTGTWVTLPSMNKPRKMCSGIFMDRKFYVIGGIG 291

Query: 749  -SNTQLLTCGEEYDLERGTWRLIPNMSSGLNGASG----------APPLVAVVNNNLYAA 603
              N+  LTCGE YDLE  TWR IPNM  G NG++G          APPLVAVVNN LYAA
Sbjct: 292  VGNSNSLTCGEVYDLEMRTWREIPNMFPGRNGSAGVAEATPAAAEAPPLVAVVNNELYAA 351

Query: 602  HYSEKEIRKYDKETNSWITLGRLPERPASMNGWGLAFRACGERLIVIGGPRVLGGGMIEL 423
             Y+EKE+RKYDK  N W+T+GRLPE+  SMNGWGLAFRACG+RLIVIGGPRVLGGG+IEL
Sbjct: 352  DYAEKEVRKYDKARNLWVTVGRLPEQAVSMNGWGLAFRACGDRLIVIGGPRVLGGGIIEL 411

Query: 422  HSWKPKDGPPEWTMIASKHSGSFVYNCAVMGC 327
            +SW P +GPP+W ++A K SGSFVYNCAVMGC
Sbjct: 412  NSWSPGEGPPQWDLLARKQSGSFVYNCAVMGC 443


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