BLASTX nr result

ID: Dioscorea21_contig00002965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002965
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543608.1| PREDICTED: charged multivesicular body prote...   311   1e-82
ref|XP_004146833.1| PREDICTED: charged multivesicular body prote...   310   4e-82
ref|NP_001105218.1| superal1 [Zea mays] gi|30270581|gb|AAP15161....   307   3e-81
ref|XP_002437337.1| hypothetical protein SORBIDRAFT_10g025200 [S...   306   7e-81
ref|XP_002281282.1| PREDICTED: charged multivesicular body prote...   306   7e-81

>ref|XP_003543608.1| PREDICTED: charged multivesicular body protein 1-like isoform 1
           [Glycine max] gi|356550468|ref|XP_003543609.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 2 [Glycine max] gi|356550470|ref|XP_003543610.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 3 [Glycine max] gi|356556672|ref|XP_003546647.1|
           PREDICTED: charged multivesicular body protein 1-like
           [Glycine max]
          Length = 203

 Score =  311 bits (798), Expect = 1e-82
 Identities = 164/203 (80%), Positives = 174/203 (85%)
 Frame = +3

Query: 156 MGNTEKLMNQIMELKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 335
           MGNTEKLMNQIMELKFTSKSLQRQ                     GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLMNQIMELKFTSKSLQRQSRKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 336 KRNEQMNYLRLASRLDAVVARLDTQAKMQTVGKSMGSIVKALDASLATGNLQKMSETMDQ 515
           KR EQMNYLRLASRLDAVVARLDTQAKM T+ KSMG+IVK+L++SLATGNLQKMSETMD 
Sbjct: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGNLQKMSETMDS 120

Query: 516 FERQFVNMEVQAEFMEGAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 695
           FE+QFVNMEVQAEFME AMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ AAHA+P
Sbjct: 121 FEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 696 AKEKEKVGEDDLSRRLAELKSRG 764
           AKE +KV EDDLSRRLAELK+RG
Sbjct: 181 AKEADKVDEDDLSRRLAELKARG 203


>ref|XP_004146833.1| PREDICTED: charged multivesicular body protein 1-like [Cucumis
           sativus] gi|449476685|ref|XP_004154806.1| PREDICTED:
           charged multivesicular body protein 1-like [Cucumis
           sativus]
          Length = 203

 Score =  310 bits (794), Expect = 4e-82
 Identities = 161/203 (79%), Positives = 175/203 (86%)
 Frame = +3

Query: 156 MGNTEKLMNQIMELKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 335
           MGNTEKL+NQIMELKFT+KSLQRQ                     GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 336 KRNEQMNYLRLASRLDAVVARLDTQAKMQTVGKSMGSIVKALDASLATGNLQKMSETMDQ 515
           KR EQMNYLRL+SRLDAVVARLDTQAKM T+ KSMGSIVK+L+++LATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 516 FERQFVNMEVQAEFMEGAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 695
           FE+QFVNMEVQAEFME AMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ AAHA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 696 AKEKEKVGEDDLSRRLAELKSRG 764
           A+E EK+ EDDLSRRLAELK+RG
Sbjct: 181 ARETEKIDEDDLSRRLAELKARG 203


>ref|NP_001105218.1| superal1 [Zea mays] gi|30270581|gb|AAP15161.1| superal1 [Zea mays]
           gi|223943937|gb|ACN26052.1| unknown [Zea mays]
           gi|224035597|gb|ACN36874.1| unknown [Zea mays]
           gi|413954656|gb|AFW87305.1| supernumerary aleurone1
           isoform 1 [Zea mays] gi|413954657|gb|AFW87306.1|
           supernumerary aleurone1 isoform 2 [Zea mays]
          Length = 204

 Score =  307 bits (786), Expect = 3e-81
 Identities = 166/204 (81%), Positives = 173/204 (84%), Gaps = 1/204 (0%)
 Frame = +3

Query: 156 MGNTEKLMNQIMELKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 335
           MGN EKLMNQI +LKFTSKSLQRQ                     GNMDGARIYAEN+IR
Sbjct: 1   MGNPEKLMNQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 336 KRNEQMNYLRLASRLDAVVARLDTQAKMQTVGKSMGSIVKALDASLATGNLQKMSETMDQ 515
           KR E MNYLRLASRLDAVVARLDTQAKMQ +GKSM SIVK+LD+SLATGNLQKMSETMD 
Sbjct: 61  KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMQSIVKSLDSSLATGNLQKMSETMDN 120

Query: 516 FERQFVNMEVQAEFMEGAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 695
           FERQFVNMEVQAEFMEGAMAGSTSLSTPE EVNSLMQQVADDYGLEVSVGLPQAAAHAIP
Sbjct: 121 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 180

Query: 696 -AKEKEKVGEDDLSRRLAELKSRG 764
            AK+KEKV EDDLSRRLAELK+RG
Sbjct: 181 AAKDKEKVDEDDLSRRLAELKARG 204


>ref|XP_002437337.1| hypothetical protein SORBIDRAFT_10g025200 [Sorghum bicolor]
           gi|195624138|gb|ACG33899.1| charged multivesicular body
           protein 1b [Zea mays] gi|241915560|gb|EER88704.1|
           hypothetical protein SORBIDRAFT_10g025200 [Sorghum
           bicolor]
          Length = 204

 Score =  306 bits (783), Expect = 7e-81
 Identities = 165/204 (80%), Positives = 173/204 (84%), Gaps = 1/204 (0%)
 Frame = +3

Query: 156 MGNTEKLMNQIMELKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 335
           MGN EKLMNQI +LKFTSKSLQRQ                     GNMDGARIYAEN+IR
Sbjct: 1   MGNPEKLMNQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 336 KRNEQMNYLRLASRLDAVVARLDTQAKMQTVGKSMGSIVKALDASLATGNLQKMSETMDQ 515
           KR E MNYLRLASRLDAVVARLDTQAKMQ +GKSM SIVK+LD++LATGNLQKMSETMD 
Sbjct: 61  KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMQSIVKSLDSALATGNLQKMSETMDN 120

Query: 516 FERQFVNMEVQAEFMEGAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 695
           FERQFVNMEVQAEFMEGAMAGSTSLSTPE EVNSLMQQVADDYGLEVSVGLPQAAAHAIP
Sbjct: 121 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 180

Query: 696 -AKEKEKVGEDDLSRRLAELKSRG 764
            AK+KEKV EDDLSRRLAELK+RG
Sbjct: 181 AAKDKEKVDEDDLSRRLAELKARG 204


>ref|XP_002281282.1| PREDICTED: charged multivesicular body protein 1 [Vitis vinifera]
           gi|147855645|emb|CAN79153.1| hypothetical protein
           VITISV_016190 [Vitis vinifera]
          Length = 202

 Score =  306 bits (783), Expect = 7e-81
 Identities = 163/203 (80%), Positives = 174/203 (85%)
 Frame = +3

Query: 156 MGNTEKLMNQIMELKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 335
           MGNTEKLMNQIMELKFTSKSLQRQ                     GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLMNQIMELKFTSKSLQRQARKCEKEEKGEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 336 KRNEQMNYLRLASRLDAVVARLDTQAKMQTVGKSMGSIVKALDASLATGNLQKMSETMDQ 515
           KR EQMNYLRL+SRLDAVVARLDTQAKM T+ KSMGSIVK+L+++LATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 516 FERQFVNMEVQAEFMEGAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 695
           FE+QFVNMEVQAEFME +MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ AAHA+P
Sbjct: 121 FEKQFVNMEVQAEFMESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 696 AKEKEKVGEDDLSRRLAELKSRG 764
           AK  EKV EDDLSRRLAELK+RG
Sbjct: 181 AK-AEKVDEDDLSRRLAELKARG 202


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