BLASTX nr result

ID: Dioscorea21_contig00002955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002955
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like i...   319   2e-85
ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [...   319   2e-85
ref|XP_002329949.1| predicted protein [Populus trichocarpa] gi|2...   319   2e-85
gb|AFK33953.1| unknown [Medicago truncatula]                          318   4e-85
gb|ACV82919.1| RabA2 [Phaseolus vulgaris]                             318   4e-85

>ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
           gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related
           protein Rab11C-like isoform 2 [Glycine max]
          Length = 216

 Score =  319 bits (818), Expect = 2e-85
 Identities = 160/169 (94%), Positives = 163/169 (96%)
 Frame = -3

Query: 509 MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 330
           M HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 329 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 150
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 149 MMAGNKSDLKHLRSVQEDDAQELAEKEGLSFLETSALEAHNIEKAFQTI 3
           MMAGNKSDL HLR+V EDD Q LAE+EGLSFLETSALEA NIEKAFQTI
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTI 169


>ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
          Length = 216

 Score =  319 bits (818), Expect = 2e-85
 Identities = 160/169 (94%), Positives = 163/169 (96%)
 Frame = -3

Query: 509 MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 330
           M HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 329 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 150
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 149 MMAGNKSDLKHLRSVQEDDAQELAEKEGLSFLETSALEAHNIEKAFQTI 3
           MMAGNKSDL HLR+V EDD Q LAE+EGLSFLETSALEA NIEKAFQTI
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTI 169


>ref|XP_002329949.1| predicted protein [Populus trichocarpa] gi|222871971|gb|EEF09102.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  319 bits (818), Expect = 2e-85
 Identities = 160/169 (94%), Positives = 164/169 (97%)
 Frame = -3

Query: 509 MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 330
           MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ++GKT
Sbjct: 1   MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60

Query: 329 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 150
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 149 MMAGNKSDLKHLRSVQEDDAQELAEKEGLSFLETSALEAHNIEKAFQTI 3
           MMAGNKSDLKHLR+V E+D   LAEKEGLSFLETSALEA NIEKAFQTI
Sbjct: 121 MMAGNKSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTI 169


>gb|AFK33953.1| unknown [Medicago truncatula]
          Length = 215

 Score =  318 bits (816), Expect = 4e-85
 Identities = 160/169 (94%), Positives = 162/169 (95%)
 Frame = -3

Query: 509 MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 330
           M HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 329 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 150
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVI 120

Query: 149 MMAGNKSDLKHLRSVQEDDAQELAEKEGLSFLETSALEAHNIEKAFQTI 3
           MMAGNKSDL HLR+V EDD Q LAEKEGLSFLETSALEA NIEKAFQTI
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTI 169


>gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
          Length = 216

 Score =  318 bits (816), Expect = 4e-85
 Identities = 160/169 (94%), Positives = 163/169 (96%)
 Frame = -3

Query: 509 MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 330
           M HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1   MTHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 329 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 150
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 149 MMAGNKSDLKHLRSVQEDDAQELAEKEGLSFLETSALEAHNIEKAFQTI 3
           MMAGNKSDL HLR+V EDD Q LAE+EGLSFLETSALEA NIEKAFQTI
Sbjct: 121 MMAGNKSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTI 169


Top